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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0470000 |
| Transcript ID | LotjaGi1g1v0470000.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SET domain protein; TAIR: AT1G01920.2 SET domain-containing protein; Swiss-Prot: sp|Q9XI84|RBCMT_ARATH [Fructose]-bisphosphate aldolase]-lysine N-methyltransferase, chloroplastic; TrEMBL-Plants: tr|K7LG80|K7LG80_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0470000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98044809..98052637) extracted from Lotus japonicus Gifu genome v1.2.
CGCAAACCAAAAATTGAGCTGCTAGCCATGGAAAACCCAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTGCAGGTTCG TTATCTTCATTTCTAATTTACGGCCCAAAAGCTAAACATTTCAAACATTTCGTGTTCTTGTTTTTCATTTTGCTTTGAAT TTCGATTTGTTATTGATTTCAGACAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTACTGTGATTCCAGAAAAGGGT TTGGCATCTTTTCTGATAATGATGTTTCTGATGGTAATATCAATATGAAAATGGAGTTATTGCTTGATAGCATGTAACAT TGTTTTTTGCTGTTTTGAACTGGAAAGTATGTAGCTTTATGCAATTTATGTTACTGCATTTTTGTTGTGCAATCTTGGAA TTGTGAAAAATCATCCCTTTGAATCAAAAAATTGAGATGTTATGTTTTTGCTTTTTCCAATACAAATCCTTGAAAACGGA AACAAAGTGAAAATAAGGTGGAAATTTTGTAACTAAGTGCTTATATCTCAAATACATTTTTGATTTTACCCTGAATGCTT GTGCCTTATAGCTCTGTAGACCTGTATGTTGACTTTTGGAAACAGATGAAACCATTTTCATTTTTCTGAATGATAGGGGT TCTGGTGGTTGTTCCACTAGACTTAGCAATTACTCCGATGAGGGTGTTGCAAGACCCTCTTTTAGGACCAGAGTGTAGGG CAATGTTTGAAGAAGGAGATGTAGATGACAGGTTATTAATGATGCTGTTGCTGACTGTGGAGCGTTTGCGTAAGAATTCT CCATGGAAGCCGTATGTATAGTTGTTTGTGTAACTTGTGTTATACTTTATAATTCAGATTATATTTTGAGTTTCACTTTT GGAGTGGTTAAAATTTGAATAGGTACCTTGCTATGCTTCCAACCACTTTTCAAAATACACTTTGGTTTAGTGATGATGAA CTTCAAGAGCTAAGAGGAACCACATTATATCGTGCAACTGAATTACAGGTAATTTATCATGGGACTTGGCTTTTTATACC ATAAATCAATTTGATTTAAACTGTTTTTGAGTAATAATAGTCAATATGAATTAGTTGTCTGCAGTATATTTTGGGCAATT GCTTGAATGAGAGCATGCACTAGATACGAAATGAAAATTACATATAAGCCAAACCTAGTTTTTTTAATATGATCACCAAT AAGTATTAGAGATATATTTCCTTTTTGGCTGATTCGACCTGTGAGGTGAATCTGTTTAGTTTGTTTAATAAGGTCTGAGA TAGAATTACATGTCAACTATGCTATTTTCTTCAGTCATCTTAACTTATAGTTTATTTCATAACTGTTTTGTCTTGCAGAA GAAAAGCCTGCTGTCATTGTATGAAACTAAAGTGAAGGATGTAGTCAAGAAGCTTTTGGCTCTTGATGGAGATTCAGAGA TGTATGTATGGAGTAAAATTGTCTTTTTACTGAGTTGTTTATTTTTTGTAGTGGTATATTCGTGGTTGACAAGTCTTGAC ACCTGTTGAAATCTTGACATCTTGTAGTTTTGAGTTAGTTAATGTCAGTTATATGTCGATGATATTTATTTTGTTTCGGG ATTGAGAACTACAGTTTTGAAAGTATAATCTACTAGTTACCAGTTTACTGCTTCACCTTATATGGAAATATGAAACCAGT ATACAATTAACAACAAAATGTGGATGTGCTACACTATGTTAAATGTGCACCTACTTGTCTTCATAAATCATGTTCAAGAT GTTTTACTTTTACTCAGATGTGAGTCATCTGATTTAGAATGAGATGTGAACCATAGGATTCATGCAACATGGGTAAACTA AAGGAATGCTTGGGGTGTAATTTGTAATGAAAAGTATGACTTAAGCTTGTAGAATTTTTTTGCTACACAACTATAAGACC AGACCTGTAGAAGAACCAGTAAGGAGCGTAAGGGAGATGGCGAATAACTGAGTAGTTAGAGATTGAGAGAGACCAAGAAA AAAAGTCAGGCAAACCATTAAGAAAGGTTTGGATATAAATGGTTTGTTTCTACACATGATTCATGATAGGATGTTATGTT ATCATTTGATTCATGTAGCCAACCCCTTGTTATGCTTGTGTGTCATTTGGTCATTGAAGTGCTATGATAATTGATGTGTC TTTCTGAAGAATGCTAAGATATAGTCCATTTCATGTTAGAAAAATGCATAGGTTATAGGATCACATTCAGGTTACTTTCT TTTCATTTGGTTATAGTCTTATGTTGTAAGTACAAGATTGTTGAATTTGAAATGTATTTTATACAATGTAATTTACACCC TTACATTTCTGTTTACCCTAAATTTATTAGCAATAAATATGACTTATTTCTTCATTGGATGAATTGAAATGTACTCTCTA GATTTTACTTTCAAACAGCCATTTCTTTGCTAAACTTTAGACATTTACATTTCATCTTTTCTGTCTGACCTTTTTTTTTC TTTTTCAGTGAGTCGTGCTTTGAAGATTTCCTTTGGTATGTACTTCTAGTGAACTTTTATATGACTTAAACTAAGTCCTT GGAGGTTGATAGCAGACTTGCCTTGATGCTAGGGCAAATTCAGTATTTTGGAGCCGGGCTTTGAACCTCCCTTTGCCTCG TTCTTATGTATTTCCAGAAATGCAAGAAGTTCAAGAGAGTTGCATTCTAGAAGCTGATGAAAAAAGTAACTTCATCTCTT TTTTCCTATCTAAGTAGTTTCCTATAAGAATTTTCTCTTCCTTGTGTGTCTAATTGAGAGGTGAGGTCATCATTTAAAAT TTTTCTGAGTTTAAGAGTTAAAAGTAATATTAAAATAGGGAAGTGTTTTTTTTCAGTAAGCCAGGATAAAAAACAGGACA ATCTAACCAAGGAAATTACATGTAACACAGTGCAAGGAGACACTGTATGGGTTGAAGGTCTTGTCCCTGGCATTGACTTC TGCAACCATGGTAACTTGTTGCTTGACATTCACTTTGCTATTTTTTTAAGTACTTTCCTTTTCCTTTATTCATTTATTGG GATCTGGTTGTTTCCCCGTTAGTTGTTGTTTGATATGAAACTCAGTCTAAGTGCTTCACCTAATAAAATTTAGTCAAATA ATTTCTTGACATGGTAGCAAAGTCTCGATGATCAAGTGACCAATATTTCAGCTTTCCCCTTTCTGATAAAATTTGGTACA AACTACAAAGCAATTGTTGCACTTCAAACCCCAACGAGTGAAGAACTGTTGTGTGGGAGGGAATAATATATATCTTGAAC ATTTCTGTAAATTTATTGATAGGGGATATATTACCTTTATGATATGCCAGTTGCTGTTTGTCTTGACTCTCGTGATGTTA AAGGGGTATTCTCTTTTGCATAATAACACTTATCAAAGTGGTATTCTTTTGTTTTCATAGTGACAGTGCCATGTGGTACT GCTGTACTGGTATCATATATAAACTAAGTCATAAATCCAGATGCAAGGTTCACAAGTGATAGGAAATATCTATTATTGCT TTGAGAAATGAAAAGTTAATGAACTATTTATATGCATATTAATGTGTGCTTGGCTTAGTTCCAGGGTGAGTTTTGGCTTA TATGGTAGATATATCAAATACCTCATGCTAATATAGTAATTTACCTTAATTACATGGCCAATCAGATCTGAAGCCAAAAG CGACATGGGAAGTTGATGGAACTGGTTTAACAACAGGAGTTCCTTTCTCCATGTATCTCATTTCCGGTAACATTCTTTTC GTGGCTTTTCAGTGTCCTTGTTAACGACCAATAAAGTTATTTCCTTTTATGTACCTCTGCAGTTCTAATAGTTACTGTCA TATCTCTAACATAATTTCCTTTTATTTTTCTCTTTCATTTAAGCATTTTTGTAATATTGTATGTCGTAAAACTATTCCTG TCTAATTAATATTTTTTTTATTGCAAAGCTGCTCAAAGTCCCTTGCAGACTGATCAAGAAATTTCCATTAGTTATGGCAC CAAGGGAAATGAGGTACTTTATATTGTGTTATGATTGGAAAGAAAATGAAAAAATATAACCAAATTCCTTTATTCTTTTA TACTCTAGAGTTTACTTTTCTCCCTCTTCTTTATCAAGCACTAATCTTTTTATGTGCATGCAGACACATGGGGGAAATAA GGTTTGTCATAGGAATTTTTCATGTGGCTAATACTGGTGCAATGTTTTGTTGGCAGTTTATTCAATATGAGTATATGACT AAAAGAAGGTTTAATAACCATATACATAACTATTGTTCGATAAATGCAAATCTAGACATTGCACCATTGACTTGGCCTTT TGGCTTAGTTGAGTTTCTCATGAACCAACTATCCAAAAAGTTGAAGTTGTTGGGTGAAGACACCTTATTGGTTTTATATT ATATTTCTAACATGTTCCTTCATGCAAGAGCCCATTGGCCTTAATTTGGTGGACGGCCATGGTACAAGCTTCATAACCAA GGCCAATTGTCTCTTGCGTAGACAATGCACGCCTTTTTATTAAAATAATAGAGTCAACAAAGATTGAACTCTAGAACACT TAGTCATAGAGCCTCCAATGTCATGTCATGAACCAACTATCCCAAAAACCTAAGTTGTTGGTTGAAGAGTGAACTGAAGA CACATAAATGATTTTATATTTTATTCCTAACAGAGTTCACATCTACCATTATGAAACATTTAAAGTTTTGAATATATACT TTCATATATATATTTACTAAATGTGAGTAAAAGTCAGTAAATGGAGCTTCTATTCTGTTGAAGGCTATTTGAATCTTATT TCAAGTACTACATGGTTTCCATATTTTTCAACTTGATGCAGGAACTTCTATATCTGTACGGTTTTGTCATTGATGGTAAC ACAGATGACTATCTCATGGTAATGACTTACTCTTGTATTCAGTTTCTACTTTATTGAAGATTTATGTTGTTTATCACTTG ATCTTTAGAACTATGCCCCCAATGTTTGTTGCTATTTGGCAGCTTTCATTTACCAGAAGTCTTACTAAAAATCTTTAATA TTAATAATATCCAACTGTTCTTTATCCATTTCCTTGCAATAGTAGTACAATTAGTTTTGGTTTGCAACTACAGTAGCATT TCATACTTTGACCATACTTTCTTAATTTTGCCCATGGCTGCTGCCATTTTGCTTCAGTTACTGTCTCTATATCATGGGCT GTTTAGCACGGTTCATACAGTTATAGACATGGCTTACTAATCCGTGTTGTTGGGCTGTTCAGGTCCACTATCCAACAGAA GCAATTAGTACTATTTCTTTTTCAGAAGCCAAAAGCCAGCTTCTTGAAGTGCAGGTATGGTAATAATATATGTTAACCTT TAAGCCATTTTTTTAAGAAGTAGAATATGATTTATCTCTCCAACTTTGTACTACCTATTTTCTAAAATTCCCCCCTTGTG TAACTTCACTTTATTTTTGTGTTTACAGAATGCTGAAATGAGATGTCTTTTACCCAAAGCTTTGCTGGAGCATGGATTTT TTCCATTAGGCACACGAAACAGTGGAGAAAATAACAAGTCCAACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAA ATGCCATCTTATGTAAACAAGCTGGTTTTTCCTGAGAAGTTTATAGCCACCTTGAGGACCATAGCCATGCAAGAAGATGA GCTTTTCAAGGTTTCCTCAATGCTGGAAGAGGTAAAGTTTCTATGCAGCATTTTATTTTTCATATTTCCCTTGGATGTCA GACTTAGCTCCTGCCCTGACTATTGAAACTGTGTTTTCTTTTGCTTTGGTAAATTTTCTATCAAGATTTGCCACATTTCC TACCCTTTGCATCGCTTAACTAGGACAAGTGATGTGACTCTGCTACTTGATATGTAGTTCCATGCTTCATGGGGACAGCA TCTGGGAATTGTATGATACATTTATGATTTATCTTTTATAGGCAAAACAGACCTTACCTCTTTTACATTGGAATTTCCCA ATACTTGGAAGAAATTAATAATTCAAACATAAAAGAATAAATGGAACCACTAATTGTAAATTGGTGCTGAACATAGTACA ACAACAAAAGCTTTATTCAACTAAGTGAGGTCGGCTATATAGTAAATTGGTGCTGAACATAGTACATGATTTTTACAATG CATATAAGGTCATTTACATTTCTTTCCTTTAATTTCCTTTGATTGCTGGCCGATTTTAAGCTGGGATAAAATGAAGTTAA TTTATTACATCTAGCCAAGACCAATAGAAAAGTACTAAGCATTATATTAATTTGAATTTTTTATTTTCAATTTCCTCTGA TTTCAAACTTCATAAAAATTTTATGCTTTCTATTAAGCTTGCTGGACCTGAAAGGGAGAGACAACCGTCTGATACAGATG TCCAATCAGCAATATGGGAGGTGTGCGGCGATTCCGGAGCCTTACAATTGCTTGTTGATCTTCTTCATGTAAAGTGAGTC CCAGGAATTACACAGACACCATAATTGTGGATAGGATCATGTTAATCACAACCTGAAATATTTTTAGTACTTTACTCAAG TGCATGCATTGCAACTTTTTTCCTGGAAATGATGTTAAATTTTTTCTTTTTTATCTCCAATGTGCCATTTCATTTATGGA GCAAATAAGGACACATACTAGAACACCAACATTGATATATCTTATGTACAATGCCTAATTAACTTCACTCCATTCAAGGT TGATGGATCTTGAAGAGAGTTCTGGAACAGAAGAAAGTGACCATGATTTACTCAAGAAAGCCCTTATTATTGATAGCCAG GATGATAGCAAACAGTGCACGAGCAATTTAAGGTAAAAACTTGTGTACTTGATCTCAGTAATCATAATCATATACCTTAG ATTATTGGAGACCGCTCTGGTACTTATCTTTTATCAAGCGTACTGGTACTTGATTTACAACTTATGGTGACACTGCTAAA TCTTCTTTTATGAATCAAATCACTTTTGAAATCCATGCTTTTATAATTCTTCCATGTTTAACATTTTTGGTTGCATACAA GTCTAGGATTGTTGAGTGTGAACTGTGAAGTGAGTGTGTATCTTACCCCTCCCTGGATTTAAGATGCTAAACTCCTGTGA TTCATAATTTTCTTAGTCTGACAGTGTACCATCTTTCTATTATAAATGTCAAATTGTGAAGTGTTTGTTGATTGAAAAGA TTTGCAAAGTATCTAAAATTATCTCATCAGCCAAAGAAAGCTTGCATTCCTCACCTGATTTATAATTTTCCTACTGATTT TTTTTGTCTTTCAGACCTAGCACAATAATGTCAGATGATCCATATAGCCAACTTCACTTAGTTGGATAAGGATTTTGTTG TATTCTTTGTCTTTCTAATAGTTATTTTCCACAAAATTTCAGCACATTTGCAAATGACTCAGAAGAATCAAAGTTGATGA TGACTAGAAACAAATGGTCAGCTATAGTGTACCGGCAAGGCCAGAAGGAGCTAACTCGATTATTCTTGAAAGAAGCAGAA CATGCTCTGGAGTTATCACAAAACGAAGAGGTGAATGCTCCTTGATGAGTGATAACCATATCAAACTGTATAGTGTTCTT CTTGTTCCCTGATTAACCAATAATTGGAGTAAACTACTCTCATATTCGTCTGAGAAATAGAGTAGTAGGACACATTAGTC CCGGTAATGCCAAATGATTATCGGAAGTGTTATTTAGCCTGTTTTTCTATTTTTTGTATGCCCTTAAAAGATATGGGTGA ACAAGTCAGACATGAGGATTTCATGAAAAACGTTCTTATTTTAAGTTGCATTTGTATGAGAGAATTTAT
CDS sequence (LotjaGi1g1v0470000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAACCCAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTGCAGACAAATGGGGTGGAGCTACGAGGTTGCAAGAT CAAGTACTGTGATTCCAGAAAAGGGTTTGGCATCTTTTCTGATAATGATGTTTCTGATGGGGTTCTGGTGGTTGTTCCAC TAGACTTAGCAATTACTCCGATGAGGGTGTTGCAAGACCCTCTTTTAGGACCAGAGTGTAGGGCAATGTTTGAAGAAGGA GATGTAGATGACAGGTTATTAATGATGCTGTTGCTGACTGTGGAGCGTTTGCGTAAGAATTCTCCATGGAAGCCGTACCT TGCTATGCTTCCAACCACTTTTCAAAATACACTTTGGTTTAGTGATGATGAACTTCAAGAGCTAAGAGGAACCACATTAT ATCGTGCAACTGAATTACAGAAGAAAAGCCTGCTGTCATTGTATGAAACTAAAGTGAAGGATGTAGTCAAGAAGCTTTTG GCTCTTGATGGAGATTCAGAGATTGAGTCGTGCTTTGAAGATTTCCTTTGGGCAAATTCAGTATTTTGGAGCCGGGCTTT GAACCTCCCTTTGCCTCGTTCTTATGTATTTCCAGAAATGCAAGAAGTTCAAGAGAGTTGCATTCTAGAAGCTGATGAAA AAATGCAAGGAGACACTGTATGGGTTGAAGGTCTTGTCCCTGGCATTGACTTCTGCAACCATGATCTGAAGCCAAAAGCG ACATGGGAAGTTGATGGAACTGGTTTAACAACAGGAGTTCCTTTCTCCATGTATCTCATTTCCGCTGCTCAAAGTCCCTT GCAGACTGATCAAGAAATTTCCATTAGTTATGGCACCAAGGGAAATGAGGAACTTCTATATCTGTACGGTTTTGTCATTG ATGGTAACACAGATGACTATCTCATGGTCCACTATCCAACAGAAGCAATTAGTACTATTTCTTTTTCAGAAGCCAAAAGC CAGCTTCTTGAAGTGCAGAATGCTGAAATGAGATGTCTTTTACCCAAAGCTTTGCTGGAGCATGGATTTTTTCCATTAGG CACACGAAACAGTGGAGAAAATAACAAGTCCAACCAAGTTTGCAACTATAGTTGGAGTGGTCAGCGCAAAATGCCATCTT ATGTAAACAAGCTGGTTTTTCCTGAGAAGTTTATAGCCACCTTGAGGACCATAGCCATGCAAGAAGATGAGCTTTTCAAG GTTTCCTCAATGCTGGAAGAGCTTGCTGGACCTGAAAGGGAGAGACAACCGTCTGATACAGATGTCCAATCAGCAATATG GGAGGTGTGCGGCGATTCCGGAGCCTTACAATTGCTTGTTGATCTTCTTCATGTAAAGTTGATGGATCTTGAAGAGAGTT CTGGAACAGAAGAAAGTGACCATGATTTACTCAAGAAAGCCCTTATTATTGATAGCCAGGATGATAGCAAACAGTGCACG AGCAATTTAAGCACATTTGCAAATGACTCAGAAGAATCAAAGTTGATGATGACTAGAAACAAATGGTCAGCTATAGTGTA CCGGCAAGGCCAGAAGGAGCTAACTCGATTATTCTTGAAAGAAGCAGAACATGCTCTGGAGTTATCACAAAACGAAGAGG TGAATGCTCCTTGA
Protein sequence (LotjaGi1g1v0470000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENPEAKLETFMQWLQTNGVELRGCKIKYCDSRKGFGIFSDNDVSDGVLVVVPLDLAITPMRVLQDPLLGPECRAMFEEG DVDDRLLMMLLLTVERLRKNSPWKPYLAMLPTTFQNTLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDVVKKLL ALDGDSEIESCFEDFLWANSVFWSRALNLPLPRSYVFPEMQEVQESCILEADEKMQGDTVWVEGLVPGIDFCNHDLKPKA TWEVDGTGLTTGVPFSMYLISAAQSPLQTDQEISISYGTKGNEELLYLYGFVIDGNTDDYLMVHYPTEAISTISFSEAKS QLLEVQNAEMRCLLPKALLEHGFFPLGTRNSGENNKSNQVCNYSWSGQRKMPSYVNKLVFPEKFIATLRTIAMQEDELFK VSSMLEELAGPERERQPSDTDVQSAIWEVCGDSGALQLLVDLLHVKLMDLEESSGTEESDHDLLKKALIIDSQDDSKQCT SNLSTFANDSEESKLMMTRNKWSAIVYRQGQKELTRLFLKEAEHALELSQNEEVNAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 202 | 199 | 2.5E-251 | – | |
| PANTHER | 4 | 202 | 199 | 2.5E-251 | – | |
| Gene3D | 5 | 292 | 288 | 3.2E-56 | – | |
| SUPERFAMILY | 7 | 296 | 290 | 1.8E-50 | – | |
| ProSiteProfiles | 25 | 278 | 254 | 8.982 | ||
| Pfam | 35 | 278 | 244 | 9.7E-11 | ||
| PANTHER | 211 | 533 | 323 | 2.5E-251 | – | |
| PANTHER | 211 | 533 | 323 | 2.5E-251 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0470000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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