Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0472800 |
| Transcript ID | LotjaGi1g1v0472800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase RIO1; TAIR: AT2G24990.1 Serine/threonine-protein kinase Rio1; Swiss-Prot: sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1; TrEMBL-Plants: tr|A0A151TBL1|A0A151TBL1_CAJCA Serine/threonine-protein kinase RIO1; Found in the gene: LotjaGi1g1v0472800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98335202..98341413) extracted from Lotus japonicus Gifu genome v1.2.
GTAATATTTCGGTTATTATTATTTCTTTGAATTTCATTTTTGATACATAGTAGGGTATTGGCAGCAAAAACACTCACCGC TTTCATCGCCTCTCTCAGTTCACGAACAACACCGGCGGCACAATGAACACCGCCGTTGAACACGAACCCCATCAAGAAGA AGTAGAAGAAGAAGAAGTTGAGGATTCATGTTCTTCAGATTCAGAAATCGGCGATGCGTTAGACTGGTTGGATTCCAAGG ACGAAGATGAAGTGTTTGATGGCTCGTTCTCTTCCTCCCTCAGTTCCTGGCGCCCTAACGCTCACGGTGGCCACCACTCT CATTCCTCCACACTCCAACCTCTCGCCAATCGCAACCAGAAGTTCACACATCATATTCGAGCTTCACCCTTGGAGGTTCC ATTCTTCATACTACCCCCTTTTTTGATACCCTTTACTTCCTTACATGCTTAATCATTCTAACATCCAAATGGGTGTCTCA TCTTGCAATATTGACATTTGAAGAGTCTTTTATCGATTAAAGTTTGATTTTTTAGGATTTTACTGTAATTTATATTGATA AATAGTGCTTATTTCACTATTGGGTTTTCCCCTCCTTTTCAGTATTACTTGGTTTTTCATTGAAAACATTGAGCTTTGGA CATTGTTGTTATAGCTGCATTAGAGTTTTTTTTTTTTGGTACAAATAGACTTAGTTTGAGCTTTCACCATTTGGTTTGTT TTGAAATAGGTTTAAGTTTGAGACCTGGTGGTGCAGGAGTGGGAAGGAAAACTTGTTGATATCTGCTTGTTTGTGTGTTT TTAAGTTTGTCTTGCTCATGTCCCCGAGGGTTAGCTCAAGTGGTAAGAGCTAGGGGACATAAGGGTTGGGTGGGATGAAG GGTCCAGGGTTCGAACCCTGAGGAGAGACTAATTTACTAAAATTACTAACAACTAACATTTGCCTATCAAAAAGAAAAAA AAGTTTGTCTCGCTCAGACCCTCCTGGTTTCCAACCTTTGCACTAGAAGTTTCAATGCCATTTGTAAGGGAAGCTTGCAG AGTATCATCACTCTCAGGCTTAATTGCCTCATATTTCTTGTGATCTTTACATTGTTCAGTAAAATATAGGTCACAGGAAG CCATTTTATGGGGTGGGATTTTTAACATCCTCCTCCTTAACTTCCTCAAATCCTCCATTAATGCCTGCCTACAGATGTGA CTTCCGGAGGCCCTTTATTGGAATGGACATGATTTTTTAAAACAATGCTACTTTTTTTTTGTTTCAACTGCATTACCTCT GCTGATTGAACCATTCTGTTGATTTAATTTATTTGACAGAGATTTATTGCTGCCTTCATAAGAAATATTGTTCCCTTTTA TCCTATTGGTCTTGTTTGTTTAATAGTTTTGAAATTGGGACCTGTTGGTGCAGGAGTGGGAAGGAAGGATGAATGTTGGC ATGTCTAACTCTGTGACAACAGCAATTCGTGGAAGTGTGAGAGATGGGGCCATTGGTAAAACTAATAAAACTGAGAAAGC AGACCGAGCCACTGTTGAGCAGGTAAATTATGTTGATTTCATAAAATCTGGTACCTTAATTACATAAAAAAATTAAGTCA ATGTTTGTTACTTCTCCCTATCCACTCGTTGTACACCTCATTACATTAGTTATATAAAGTATGATAGTTTAATAACTTGT TTCGTGACATGCTTCCCTACATTTTATTTAAAGAGTATATTATACAGGTGTTGTGCACGTATAATAAACAGTGACAGTTA GTCATAATAGAAGCTGCTGAGCTTCTGTTATTCTGTTCCAACAGATTCAGCTCTGCCCTGCAGTTATTTCTGTTAGGCCC TACTTATAAATAACGAGTTCTCTACAGACACTTCTTTGTGCTCAGTTCTCAAAAATGTTCTATATACAGTTTCGGTTTTC TCTCACATTCTCTCTCCCCCTTTCTTTCATTCTCTTCTTGCCTACTCAAGTGCTTGCCCATTTTATTTTATTCTTTTTTA TTATTATATAGGCTTGTTTGTTGTATGTTTCTTTTTTATAATTATCATGCAGCTAATTCTAAAATATTCCCTAGGCAATT GATCCAAGAACGCGCATGGTTTTATTCAAGATGCTGAACAGGGGTGTGTTTAACGATATCAACGGATGCATTTCAACTGG AAAGGAAGTATGTGACACACCAGAAGCCTTTATTTTCATGTTTAAGTTTGTTTTTTCTTGATCTTATGGCTTTACTTCTA TGATGAGGACTTTATGTGGATAATTTGTTATGTGATACCAATCCATCGTATTTTTATTTTGACATTTCTTGTTCTTTGAC AGGCAAATGTTTATCATGCAACCAAAAACGATGGTCAAGAACTTGCAATTAAAGTGTACAAAACATCTGTTCTGGTATTT AAGTAAGTACTCTATGTGTTAGCTTGATTTAGCTTCTTCTGTTATTATAGATTATGTTGAAGGCCGAAAATTATGAAAGA TTTACATAAGAGAGCACTGGAATCTTTATTCAAGAAAACTTTTGTTATTATTTTTTTATCATGAAAAAGTTTCTTCGAGG GGCTAGATCCTGGATATTATGATATAATATATTGTGAAAGAATTTATGGAGTTATCTTGCCTTTAGAATTAGTGAAATTG TCTTGATACATGTTCTTCTAATAAATTCCTTATATACATGCAATGCACAAATGCAGCACAAATTGTTTTCAACACATTGA ATGGAAACCTGGTTTCTTGAACCAAAGGTGCCTTTTTTTTTTATTTATCATATGAACTGAACTTTATAATCATCTGGGTG CCTTCAGGGATAGAGATAGATATGTGCAAGGAGACTTCCGGTTTAGGAATGGATACTGCAAGCATAATCCCAGGAAAATG GTAAAAACTTGGGCAGAGAAAGAAATGAGAAATCTTATGAGGTTTGCATTTGTTCTTTTTTCGTTTTTTTTTGTTAGCTT ATGCATCACAGTAAAAACTGTTAATGAAATTCCATTGAAATATGATATACTAAATTATACTATTAAAAGAAAAGGAGAGA GAATTGAAGGAAGGTAATCATGTCGGTCAACATCATCCGCTATGCATTAGGAGTTTTGTTATTAATACTCCTACCTGTAG GTTATGGCTTGATCCGTTGCTAACCTTAGATAATTAATATGTTAGCTTTTACTTAAACCAGGAACTTCTGTAGTCATCCT TTCTAATAGTTGAGATCTCTGTTAAGAATTTTATTTACGTCTTAGAGCAAATAAACTCAAATAAACCTATATGAAGTGTT AATCTGTTCTGGAGTGAATTGTCATGGTTGTCAATTTTTCCGAGCTTTTGCTCTTTTTTCCTTCTAGAGTTTTTTCTTCT GATAAAGGGGGCTCCTTGTTTTGCTTACTCCCTGAGCATGTGGGTTTATTCCTTGGGCTGATTTCAATAAAAAACTTTGA TTATTTTTTTTTTCCTGAGCTGTTTCGTTCTTTTGCCCTTTCTATATTGGATTGCAGGCTAAAAGCAGCAGGGCTTAGGT GCCCTACACCACATCTTCTGCGGCTACATGTTCTGGTTATGGAATTTATAGGTATTGCTTTATCCTGGATTTTGAGAAAA TACAAACTGACGATTCTGATCGATTGTCCATATTTAATCAGTTGCTCAAAATTGATCATATGGATTATCAGTTTATAAAT GTCTACATTTGAATAAAAAAAATGATAGAAGAGTAATGCGTAGTTTAATTGCTCTGTTCACTTATATTGAAGATGGAACT GCTAATAGCCACCCTCTAATTATCTATCACCAGTCTTCGAAAATTCCGAATTCTTTCTGTAGCATATATTATATTATTCT GGTAATGTATACTGCAGTATAGACTGAATAAATGCAAGTACAATTTTAATTGAAGTTCCGTGGTTATTTGTTTCACATAG GAAAGACTGGTTGGGCTGCTCCTCGTCTCAAAGATGCTGCTTTATCTCTAGACAAGTTACGGGAAGGCTATGTGGAGGTG GGTGATACAATAGTCTATTAATGTTTGCATGGTTTAGAAGTTAGAACATATTCCTTTAGCAGGTCTCTTGATAGTGTGTT GTTGATACTTTAACATGAGGTTGTTGTTTAGGTCCTTGGAAGCCTGCTATCTAGAATGATTACTAAAACCATACTTGTTG GTTAAAGCCTGAAAAGTCTTTACCGTCTCCTTTGAGTGTCATTTAGGGAAACACTTGTCCCATGTTTTTTACTCTTCTAA ATTCTAAGGGTGCATGTTGTAGTCTGTTCTGCCAATTTTTGAGGTTGAAATTATGTGAGCATTTGTATTTCAGATTATTA TTGCAATGCGGACGCTGTATCAAAAGTGCAAATTGGTGCATGGTGACCTTAGTGAATATAATATACTTTATTTTGAGGTT AGCATATCCTTCTACTGTTTCTATTTCATTCATTAAATGTATGTGTCAACAGTCAACGAATTTTTTTCTTAATTTGTCAG GGTCACTTGTATATTATTGATGTTTCTCAAGCTGTTGATCCTGACCATCCTCATGCTCTTGATTTTCTGCGTGAAGATTG TGTTCATATATCTGTAAGACTTATAAGAACTTGCTCTAAATTGCATATTTCTTGTGTGTTGGTGGGGCTAAGGGAAAAGT GTGATTAAGTAGTTGTTTCTCTTGTAGGACTTCTTCAAAAAGCATGGTGTGGCTGTCATGACAATAAAAGAACTGTTTGA TTTTATTGTTGATGCATCCATTGCTGATGATGCTGTGGATAGCTATTTGGAAGAGGTATTTGTCATTCTCTAATTATTGT TACATTTTATGAACAACTTCAAAGTAATCATTGTGGTATTCAAAAATTTCTAGGTGCAACAAAAAGTTTTAGCAAGAGGA GATTTATCCGTGGAGGAAGAAATTGCGGATTCTGTATTTGTGCAGGTAACCTTCCTTTTTATGTCAACTTCTTGCTTGGA AAATGCTATCTAATTTCCACTTTCTTTTCAGGTTTTAACTTTTTTACAGAAAATAATATGTTGTTGTTTGTTTCCTTTAT TAAACTTTGAAATCTAAGAACAAAGTGATAGTATTTTTGTAATGGAAACAGAATATAGGAAATGGCATCTGAGAGGTAAG TAACTAATACACCCTAACAACCAATTCTAAATCTAAACATGATTGTTGGAATATTTTTTTGTTTGAACTATAGGTATACT CCACTTAGGCAATCTTGTTCGAGCCGGGTAGTTGGAATATGATATCAACATAGAAGTTTATTTATTTCTCATAAAATTGT AAAATTCATTCCTTATTTTCATCTAAGCCGCCACTTTTCTTATTTTCTTCTATAAGCAGTAGATATGAGCTTGATTAATC ATTTTTTTTTATCAAGAACTGAAATGGGGTTCAGAACTTCAGATTGATCTTTGAATAGGTTTGTGGTCACATTGATCTTT TATGTCCGTTCTTACACAAGTTTCTGAACTCTTGTTACAGTCTTACATTCCAAAGAACCTAGTTGATGTTAAGAATGCTG AGGAGGATGCACAACGGATAGCAAGTGGGAAGGACACCGGCGATTTATTATATAAGACCATTACAGGGCTTAAACACGCT GTGCCGAATACCCAGCCTTCCCTGCGAGATGGCGAGCAAAGGCAGGAATCAAGTCGTATAGAAGATTCATGTTTAATTTC TGACAGTAAATCTAGCCTCGCAGAGGGTGATGATGCGGAGTCTCAATCAGATCAGGACGAAGATAGTGCTACTGATCCTG AAGAGGATGGGGATTCATCCTCTGGAAGTGAAACCGGTTCTCCTGTGGATAAGAAAGCAGCAAGAAAAGAAGCTAGGAAG GAAAACAAGAAGAAGGTGAAGGAGGAGAAGAAAGAAGCGCGGAAAAATAAAGTCCCTAAAGCTGTGAAGAAAAGAAAGCA AAAAATGGCAAAAGCTCGTAAGACTAGATAGGGATTTATCTATTAATATGATTATGATCATCAATTTTGCTAGTAGTTTG TTTGTCTTTTATAGAAGTCATAATGAGATATACAAAAAAGAGCAGACCTAACACAGCATTTTTGTTCAATCTGTAATTTA TGTCAGCTTATGCTTTTCTCTACATTACAAATTAGTTTCAGCCCTGTTGTTTTCTGAACATTCCATTTAACTTCATATAA CGTTTTGCTGTTTTCTTTATGAAAAAAATCTTTCTGATAGCTTAGATTGTAA
CDS sequence (LotjaGi1g1v0472800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACACCGCCGTTGAACACGAACCCCATCAAGAAGAAGTAGAAGAAGAAGAAGTTGAGGATTCATGTTCTTCAGATTC AGAAATCGGCGATGCGTTAGACTGGTTGGATTCCAAGGACGAAGATGAAGTGTTTGATGGCTCGTTCTCTTCCTCCCTCA GTTCCTGGCGCCCTAACGCTCACGGTGGCCACCACTCTCATTCCTCCACACTCCAACCTCTCGCCAATCGCAACCAGAAG TTCACACATCATATTCGAGCTTCACCCTTGGAGGAGTGGGAAGGAAGGATGAATGTTGGCATGTCTAACTCTGTGACAAC AGCAATTCGTGGAAGTGTGAGAGATGGGGCCATTGGTAAAACTAATAAAACTGAGAAAGCAGACCGAGCCACTGTTGAGC AGGCAATTGATCCAAGAACGCGCATGGTTTTATTCAAGATGCTGAACAGGGGTGTGTTTAACGATATCAACGGATGCATT TCAACTGGAAAGGAAGCAAATGTTTATCATGCAACCAAAAACGATGGTCAAGAACTTGCAATTAAAGTGTACAAAACATC TGTTCTGGTATTTAAGGATAGAGATAGATATGTGCAAGGAGACTTCCGGTTTAGGAATGGATACTGCAAGCATAATCCCA GGAAAATGGTAAAAACTTGGGCAGAGAAAGAAATGAGAAATCTTATGAGGCTAAAAGCAGCAGGGCTTAGGTGCCCTACA CCACATCTTCTGCGGCTACATGTTCTGGTTATGGAATTTATAGGAAAGACTGGTTGGGCTGCTCCTCGTCTCAAAGATGC TGCTTTATCTCTAGACAAGTTACGGGAAGGCTATGTGGAGATTATTATTGCAATGCGGACGCTGTATCAAAAGTGCAAAT TGGTGCATGGTGACCTTAGTGAATATAATATACTTTATTTTGAGGGTCACTTGTATATTATTGATGTTTCTCAAGCTGTT GATCCTGACCATCCTCATGCTCTTGATTTTCTGCGTGAAGATTGTGTTCATATATCTGACTTCTTCAAAAAGCATGGTGT GGCTGTCATGACAATAAAAGAACTGTTTGATTTTATTGTTGATGCATCCATTGCTGATGATGCTGTGGATAGCTATTTGG AAGAGGTGCAACAAAAAGTTTTAGCAAGAGGAGATTTATCCGTGGAGGAAGAAATTGCGGATTCTGTATTTGTGCAGTCT TACATTCCAAAGAACCTAGTTGATGTTAAGAATGCTGAGGAGGATGCACAACGGATAGCAAGTGGGAAGGACACCGGCGA TTTATTATATAAGACCATTACAGGGCTTAAACACGCTGTGCCGAATACCCAGCCTTCCCTGCGAGATGGCGAGCAAAGGC AGGAATCAAGTCGTATAGAAGATTCATGTTTAATTTCTGACAGTAAATCTAGCCTCGCAGAGGGTGATGATGCGGAGTCT CAATCAGATCAGGACGAAGATAGTGCTACTGATCCTGAAGAGGATGGGGATTCATCCTCTGGAAGTGAAACCGGTTCTCC TGTGGATAAGAAAGCAGCAAGAAAAGAAGCTAGGAAGGAAAACAAGAAGAAGGTGAAGGAGGAGAAGAAAGAAGCGCGGA AAAATAAAGTCCCTAAAGCTGTGAAGAAAAGAAAGCAAAAAATGGCAAAAGCTCGTAAGACTAGATAG
Protein sequence (LotjaGi1g1v0472800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNTAVEHEPHQEEVEEEEVEDSCSSDSEIGDALDWLDSKDEDEVFDGSFSSSLSSWRPNAHGGHHSHSSTLQPLANRNQK FTHHIRASPLEEWEGRMNVGMSNSVTTAIRGSVRDGAIGKTNKTEKADRATVEQAIDPRTRMVLFKMLNRGVFNDINGCI STGKEANVYHATKNDGQELAIKVYKTSVLVFKDRDRYVQGDFRFRNGYCKHNPRKMVKTWAEKEMRNLMRLKAAGLRCPT PHLLRLHVLVMEFIGKTGWAAPRLKDAALSLDKLREGYVEIIIAMRTLYQKCKLVHGDLSEYNILYFEGHLYIIDVSQAV DPDHPHALDFLREDCVHISDFFKKHGVAVMTIKELFDFIVDASIADDAVDSYLEEVQQKVLARGDLSVEEEIADSVFVQS YIPKNLVDVKNAEEDAQRIASGKDTGDLLYKTITGLKHAVPNTQPSLRDGEQRQESSRIEDSCLISDSKSSLAEGDDAES QSDQDEDSATDPEEDGDSSSGSETGSPVDKKAARKEARKENKKKVKEEKKEARKNKVPKAVKKRKQKMAKARKTR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 554 | 554 | 1.7E-223 | ||
| MobiDBLite | 1 | 30 | 30 | - | – | |
| PANTHER | 10 | 553 | 544 | 7.6E-224 | – | |
| PANTHER | 10 | 553 | 544 | 7.6E-224 | – | |
| MobiDBLite | 11 | 27 | 17 | - | – | |
| MobiDBLite | 47 | 72 | 26 | - | – | |
| SMART | 125 | 361 | 237 | 6.3E-127 | ||
| ProSiteProfiles | 142 | 459 | 318 | 8.683 | ||
| Gene3D | 153 | 255 | 103 | 4.8E-16 | – | |
| SUPERFAMILY | 156 | 342 | 187 | 4.76E-27 | ||
| CDD | 156 | 345 | 190 | 2.1721E-147 | – | |
| Pfam | 167 | 354 | 188 | 3.9E-76 | – | |
| Gene3D | 261 | 402 | 142 | 1.2E-50 | – | |
| ProSitePatterns | 294 | 305 | 12 | - | ||
| MobiDBLite | 440 | 555 | 116 | - | – | |
| MobiDBLite | 478 | 498 | 21 | - | – | |
| MobiDBLite | 508 | 535 | 28 | - | – | |
| Coils | 510 | 535 | 26 | - | – | |
| MobiDBLite | 536 | 555 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0472800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…