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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0473600 |
| Transcript ID | LotjaGi1g1v0473600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-glucosyltransferase rumi like; TAIR: AT3G48980.2 O-glucosyltransferase rumi-like protein (DUF821); Swiss-Prot: sp|B0X1Q4|RUMI_CULQU O-glucosyltransferase rumi homolog; TrEMBL-Plants: tr|A0A151TBL3|A0A151TBL3_CAJCA KDEL motif-containing protein 1; Found in the gene: LotjaGi1g1v0473600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:98400838..98404487) extracted from Lotus japonicus Gifu genome v1.2.
GGTTCGTGAACCATTGTGAGCATGTTGAATTTGAATAAATGGGTTTTATCAGCCACAGCTTTCTTCATCTATTTTGTGTT CATAATTGGATGGAGCACCTTCATCAATAGGAGTCATCTTGTAAGCCCTTTTTTAAATTCCTTCATCATCTCTGCACTTG GGTTCATTATTTTTCCCACACAAATTCTCTTAATATTTCATCCTTATTTTGTACTCCCTGTCTTTATTTCATTGATGTCA TTGTTCATTCTTTGAGTTTAGTCTTAGGATTAGGGACTTTTTAAGGATTTTATCATTGTCACTGGGCTGAAATGAAACAT AAAAATTACAATTTTTAGGAGGCCGGAATAAAAATAAAAATAAAATCTATATCATATACAACTCTTTTATTTTAAAAACA AGGGCAGGCCATGAGCCCATGAGCATATTAATTAAAGGTGATATATTAGCTCCATACCGAATCCTTCTCCATACCATAAG GTGCCCAACTAGATTCTTAAGGATTCAAATTGTGTACCAATTGCGCTATACCATGTTAGTAGAATTGTATGCATATTGAC ATCATTATAAATACACAACTTTGCAAGTACATATATCAACACTCTTCACTTGATCATAACATTTCTTATGTGGATGAGCT GATATTATTTCAGAAAACTAATCACTTAATCGCTTTGCTTTGTGTTTCAGTTCAAAGAACAAAACAAAACAGTTACATCC TTCAGTAGGAAACAAACTCAATACACATTGAACTGCTTCAATGGAAACAACACAATAACCTGCCCAAAGAATTACCATCA ACAAACATTTTATGATCAGCAAGATCAAGATTATTCATCATCATCTGCATCATCAACTTGTCCAGAGCACTTCAAATGGA TCCATGAAGATCTAAAACCATGGAAAATAACAGGAATCACAAGGGAAATGATGGAGAGTGGGAAAAATGTTTCACATTTT AGGCTTGTGATTGTGCAAGGAAAAGTTTACCTAGAAATGTATTACCGTTCATATCAAACAAGGGATTTGTTCACAATATG GGGAATTCTACAGCTTCTGAGGTTATACCCAGGGAAGATGCCAGATTTGGAGCTGTTGTTTGAGACTGAGGATAACCCTG TGGTGCATAAACATCATTTCCAAGCCAGGCCACCACCTCCAATTTTCAGTTACTGTGGCAATAGAACTGCTTTGGACATT GTCTTTCCTGATTGGTCCTTCTGGGGTTGGTAAATTTCTTCTTTCTACACTGAATCTAACTTGGAATTATGTTTTGATCA GCTTATTTTTCCTTAGAATCAATTCCGACACTAAGAAGCTACTTATAGAAGCTTCTACCCTTAATAGGTTTTGGTTTAAA AATTAATTGTAAAAATATTTCCAAATATGCACTCAAATTGTTTGAGATCTGGTCCTTCTGGGGTTGGTAAGGTTTCTACA CTGAATCACTTATTTTTCATTACAATCAATTTCGACACATAAAAGCTACTCACAGAAGCTGCTTGAACCTATAATTAATT TTGACTTTACAATCACTTGTAAAATATTTTCCAAACATGCACTTAAATTGTTTAAGTTTTGGTCTAAGTGAATTTGGAGA AATCTTTCAAGTATTTGTATTATCTTATTCTTGTTTCAAAAACATGACTGACGGAAAATAGTTACAGAGCATTACCAATT CTGCATAAATGAACATTTGTTTTTCTTAGGTTAGGATCCTCTCATGGAAATGTCAAGTCAAAAGTTGTGTCTATCTCTCT TTTTATAAATATTTAGAGATCACAATTATTTGTTACATAAGAAGAAAAAGGTAAACACTAAAATTCAACATGTGAAGCTT CCACCTAAGATGATTTTGATCCTGCTTCTCTCTTATACTTGTTTATTTGTCTTTGGCACAAATGCCTTTAACTATTCGTG AAACTGATGTTGTGTCTCCCAATAAATTACTTTCTTGGCTTTGAACTTGTGTTTTCATCTCGTGGAGGTTTAATTTGCTT ACTTTTAGACCAACACTTTGTTAGTTGCTTCTATCTTATATAAATTGCGATCTAATTTTCTTTTTAATATATGATTTCTA TTCCTTTAATTTCAAGGGCTGAGGTTGGAATAAGACCGTGGGAAACAACTCTACAGAACATACAAGATAGCAGCAAGAAG ATCAAATGGAAAGATAGGGAGCCTTATGCTTATTGGAAAGGAAACACTGATGTCTCATGGAAGAGGTACCACATCCTCAG GATGTGCAACGTCTCAAACCAACATGATTGGAACGCTCGTATATATAGAGTGGTAATTAAATATATATGATGTCAAATGA AAATAATATCAGAGCTTGTGAAATTTACCTTCATGTAATGATGAATTGTTTGCTTTTTTAGCACTGGGATAATGAAACTG CACAAGGGTTCAAGACCTCAAAACTTGAAGATCAATGTACCCACAGGTAATTAAGTATCTAATAAGATTTTCACGCCTTT GGAAATCTTTCAACAATTGATTCTAAAGCTATAATGAATTATGGGGAAAAAACTTTTATGAGTAACTTCAGGGTGCCACA ATTGATTTTGAGGAAATAGAAGTTGATCTAAACATACAACAGTTATCATTAGATACACTGCTATGCAATTACTAGATTTT CTTTTCTTGTGTTACTTTTTCATGTGAAGGTACAAGATTTATGTGGATGGGAAAACATGGTCTGTGAGTGAAAAATATAT CATGGCATGTGACTCCATGACTCTGTTTGTAGAGTCTGACTATTATGATTTCTATACAAGAGGCCTGGTACCTTTCAAGC ACTTCTGGCCCATTAGCAACCAAACCATGTGCCAAGATATTAAGAATGCTGTTGAATGGGGTAATGCTCACCCAGACAAG GTAAATCTATTATTTCTTCCATCATAAGTGCTTATTCATTAAGCTAAGTTGAGCAACTCATTAAAATAAGCTGAATATAC ACTATAAGTAAGTATAAGCATTTGTTCATAAGCTAATTTGAACAACTTATAAAATTAAGCTCCAAACAACTTTTAGGTAG GTCATAGCTAATAGACTCTTTTCAAAAAAACTTACATAAAAATTTATGTTATAAGATTAGCTTAAATAAGCTCTTCCAGA CAAGAAATTTGACCCCTTGAATATCAGTTAAGGCTTTTTTTCTTTCTAAATTGTATGTCTAGCTCTTTATTTATAATTAT ACACATAAGACAAACCTTGTCCATGAAGCTGTGGAGAAGTCAATCCCACATTAGTTTAATTACTTCACTAGTTTTCATTT AAAATTGTAGCTTAATTAGTACTTTTTAATTTTTAATTTTTTATGCATATTTTCACCAGGCAGAAGCTATTGGCAGAGCA GGGACAGGGTTCATAAAAGAGAACCTAAAGATGAAGTTTGTGTATGATTACATGTTTCATCTGTTAACAGAATATGCAAG ATTCTTGAGATTTGAACCAACCATACCTGAAGAAGCTATTGAGATTTGTTCTGAAAACTTGGCATGTACAAGGGATGCTC TGTGGAGGGAGTTTATGGATGAGTCCATGGTCAAGTCACCAAGTGACACACCTCCATGTACAATGTCTTCTCCTTATGAT GAAGACGAAGGCTCTGAGTATGATAAATAAGATAAAAAACTCACAATGAT
CDS sequence (LotjaGi1g1v0473600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTGAATTTGAATAAATGGGTTTTATCAGCCACAGCTTTCTTCATCTATTTTGTGTTCATAATTGGATGGAGCACCTT CATCAATAGGAGTCATCTTTTCAAAGAACAAAACAAAACAGTTACATCCTTCAGTAGGAAACAAACTCAATACACATTGA ACTGCTTCAATGGAAACAACACAATAACCTGCCCAAAGAATTACCATCAACAAACATTTTATGATCAGCAAGATCAAGAT TATTCATCATCATCTGCATCATCAACTTGTCCAGAGCACTTCAAATGGATCCATGAAGATCTAAAACCATGGAAAATAAC AGGAATCACAAGGGAAATGATGGAGAGTGGGAAAAATGTTTCACATTTTAGGCTTGTGATTGTGCAAGGAAAAGTTTACC TAGAAATGTATTACCGTTCATATCAAACAAGGGATTTGTTCACAATATGGGGAATTCTACAGCTTCTGAGGTTATACCCA GGGAAGATGCCAGATTTGGAGCTGTTGTTTGAGACTGAGGATAACCCTGTGGTGCATAAACATCATTTCCAAGCCAGGCC ACCACCTCCAATTTTCAGTTACTGTGGCAATAGAACTGCTTTGGACATTGTCTTTCCTGATTGGTCCTTCTGGGGTTGGG CTGAGGTTGGAATAAGACCGTGGGAAACAACTCTACAGAACATACAAGATAGCAGCAAGAAGATCAAATGGAAAGATAGG GAGCCTTATGCTTATTGGAAAGGAAACACTGATGTCTCATGGAAGAGGTACCACATCCTCAGGATGTGCAACGTCTCAAA CCAACATGATTGGAACGCTCGTATATATAGAGTGCACTGGGATAATGAAACTGCACAAGGGTTCAAGACCTCAAAACTTG AAGATCAATGTACCCACAGGTACAAGATTTATGTGGATGGGAAAACATGGTCTGTGAGTGAAAAATATATCATGGCATGT GACTCCATGACTCTGTTTGTAGAGTCTGACTATTATGATTTCTATACAAGAGGCCTGGTACCTTTCAAGCACTTCTGGCC CATTAGCAACCAAACCATGTGCCAAGATATTAAGAATGCTGTTGAATGGGGTAATGCTCACCCAGACAAGGCAGAAGCTA TTGGCAGAGCAGGGACAGGGTTCATAAAAGAGAACCTAAAGATGAAGTTTGTGTATGATTACATGTTTCATCTGTTAACA GAATATGCAAGATTCTTGAGATTTGAACCAACCATACCTGAAGAAGCTATTGAGATTTGTTCTGAAAACTTGGCATGTAC AAGGGATGCTCTGTGGAGGGAGTTTATGGATGAGTCCATGGTCAAGTCACCAAGTGACACACCTCCATGTACAATGTCTT CTCCTTATGATGAAGACGAAGGCTCTGAGTATGATAAATAA
Protein sequence (LotjaGi1g1v0473600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLNLNKWVLSATAFFIYFVFIIGWSTFINRSHLFKEQNKTVTSFSRKQTQYTLNCFNGNNTITCPKNYHQQTFYDQQDQD YSSSSASSTCPEHFKWIHEDLKPWKITGITREMMESGKNVSHFRLVIVQGKVYLEMYYRSYQTRDLFTIWGILQLLRLYP GKMPDLELLFETEDNPVVHKHHFQARPPPPIFSYCGNRTALDIVFPDWSFWGWAEVGIRPWETTLQNIQDSSKKIKWKDR EPYAYWKGNTDVSWKRYHILRMCNVSNQHDWNARIYRVHWDNETAQGFKTSKLEDQCTHRYKIYVDGKTWSVSEKYIMAC DSMTLFVESDYYDFYTRGLVPFKHFWPISNQTMCQDIKNAVEWGNAHPDKAEAIGRAGTGFIKENLKMKFVYDYMFHLLT EYARFLRFEPTIPEEAIEICSENLACTRDALWREFMDESMVKSPSDTPPCTMSSPYDEDEGSEYDK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 27 | 21 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 28 | 466 | 439 | - | – | |
| PANTHER | 42 | 458 | 417 | 3.3E-201 | – | |
| PANTHER | 42 | 458 | 417 | 3.3E-201 | – | |
| Pfam | 87 | 461 | 375 | 4.1E-168 | ||
| SMART | 162 | 409 | 248 | 1.9E-116 | ||
| MobiDBLite | 439 | 466 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0473600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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