Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0479700 |
| Transcript ID | LotjaGi1g1v0479700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | receptor-like kinase; TAIR: AT4G00300.1 receptor-like kinase; Swiss-Prot: sp|Q9FLW0|Y5241_ARATH Probable receptor-like protein kinase At5g24010; TrEMBL-Plants: tr|A0A151TB05|A0A151TB05_CAJCA Putative receptor-like protein kinase family; Found in the gene: LotjaGi1g1v0479700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99185081..99187747) extracted from Lotus japonicus Gifu genome v1.2.
TGACACTATTGCCGGATCTACGAACATCTTCAAAACGATGATGATCAACGTTTGAGATGTTTTGATCCATATTTAGAACT TAAATTCACCTTTGAGAATCGCAACCAAACGCGCTCCGAATATATGACAAGTTAGTGAATCAAACAAGATGCTTCCCAGC CTGTGTGAGAGCGTGTGGGCCCAGTTGACTCATTCTTCCCTCCATACCAGTCTTCTTCCACACAACAAAACAATGGAACC CCTTTCTATTTCAACACAATCTCCCTCTTCATCTTCTTCACTCTTCACCTCTCAATCAACCATGGAGTTCACACGCAAAA CCCTCTTTCTCTCCTTCTCCTTCCTCTCCTTCTTCACAATCCCCATCTTCTCCCACCTCTTCTCCCCCCTCGACAACTAC CTCATCGACTGCGGCTCCACCGCCCCCACCACCCTCATCGACAACCGCCCCTTCTCCGGCGACCTCACCGGAAAACACAC CCCACTCTCTTCCTCTTCCCACGTCGTCTCGATCCGGAACCAAAGCCCTCTCCCCGGTTTACCCTCAATCTACCACACCG CTAGGGTCTTCACAAACCCTACAAGGTACTCGTTCCCCATCAAAGACAGAGGTACCCACATGGTTCGCCTTCACTTCCAC CCCTTCGATTCCCCGAAACTCGATCTGGGTCGCGCTCAATTTCACGTCTTGGTTGATGGGCATGTCGTTTTGAGCAATTT TACCCGTTTGATGAAGACTGGCGGTGATGGAAACCCTAGGGTTGTTGAGTATCTGATCTGGGTCGATTCGAAAAAGCTTG TGATCGTGTTTGTGCCGAGTAAGGATTCGAAATTGGCGTTTGTGAATGCCATTGAGGTGATTTCTGCACCCAAAGACCTT GTTCCTGTTAAAGCACAGTATTTGAATTTAGGAAATTTAGAGAGTTTTGATGGTTTGAACATGCAAGCACTTGAAGTTGT GTATAGAGTCACTGTTGGGGGTCCTAAAGTTACCCCTTTTAATGATTCATTGTGGAGGACTTGGGTTACTGATGATGAGT TTTTCAAATCAAGTGTTGGGTCTGAAAGAATTGTCTTTGGTGGTAGGATCAAGTATCAAGTTGGCGGTGCTAGTCGCGAA GTTGGACCGGATAATGTGTATAATAGTGCAAGGTTGATCAGGAGTAAGAATGATTCTGTTCCTAATGTGAATATGACTTG GGTGTTTTCAATTGTTGGAGGATACAAGTACCTGGTTAGGTTGCATTTCTGTGATGTTGCTAGCATTTCGCTTGGTTTGC TATATTTCAATGTTTATGTCAATGGCTATTTAGCTTCTGAAGACTTGGATCTCTCTTACATGACAAATTCACTGGCTTCC CCTTATTATGCTGACTTTGTTGTTGATGGAGATAGCAGCACAGGGACAGGGGCACTGAGTGTTAGTATTGGTCCTTCTAA AAACAGCATTCCTCATGTCATTGATGGTATATTGAATGGAGTTGAGGTTATGAAGATGAATAACTCGCGTAATAGTCTTG ATGGAGATGTTTGTGCTGGTTTTGTTATGCAGAGCTGGTCAAGTGGAAATTCAGGTATTGTGCTAACTTTCATGGCTGCT GTTTGCATTGTGTTAAGCTTAGCCATAGTGATTCGTAGGAGGATGGTTGAGTCTAGGGAATCTGTATCATGGTCAAGGTT GCCTGTGAATTTATCGGATGATAATGTTAAAACCAGCAATATATAGTTTTATCCAAAGAAAAGAAGAAAAGATTGGCAGT GTCAGGCAAGTAAACTGTCAGCAAATCTAGCCATCTATGTGGCTTTGATAAGAAAGTTGAAACATGAAAGAACATGCTGT GTTCAAGCTAGAAAGGATGGTATAGTTTTGAAGCATAACTATTAGGGATTGTTGTACTGTATCTAAGTTGTCATACTTGT TTATATCAGAATATTTGCGTATTTAAGGCACACCTTTTGCCTTTACTTGTTGTTCATTTTGCTATGTTTTTTAATGTTAT AGCATTTTGCAATGTTTTGTAATGTTATAGCTTTCATCACTGTAATTGTTTCCACTTGAAAAATAAATTATGTAACCTTC ATATTGAGTTGTGATACTTCATTACTGAGGCTCCAAATTATCTGTTGTGGTGTGCTCAGTGCTCGTGAGTATTTTTTTGT TGTTGTAGAAAACAAGAGCTAAGCTCTTCCTGTTTTGATGATGTCGCCACCTGTTCGGAAAATGGTTACGTGTTCTCCCT ACAAATGTCTTTCTCGGGATTCAAAATTGTGCTCTCATCCTTACGAGGCCTAGCTTCCTTATCCTGAGACTAACACCTTG TTGGTTTTTTTTTATAAAAAAATTAAAAGGGTTTGTCTTTATAAAAATACAAAATCCAAAAACATGTCTTTTTGTTTTGA CATACAATCCAAAAACATGTCTACTTTGCAAGTGAATTTGAAAAATACAAAAATATAATTCCCCTTTTGGAGAAAATCAT AAAAAACATGCTCTGAGCATTCAAATCAAGCTTAATTAATATAACTAAGTTGCCTTGACTTCTCCCCTGTGCGATTTGGG AATCGATTATTGTCAAAACTCAAAACACTCCAAAATCAAGTTTCTTCAAGCAAATCAAAACACAAATAATTCAAATAATT AAAATGACAAACAAAATGTTCTTTTAG
CDS sequence (LotjaGi1g1v0479700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTCCCAGCCTGTGTGAGAGCGTGTGGGCCCAGTTGACTCATTCTTCCCTCCATACCAGTCTTCTTCCACACAACAA AACAATGGAACCCCTTTCTATTTCAACACAATCTCCCTCTTCATCTTCTTCACTCTTCACCTCTCAATCAACCATGGAGT TCACACGCAAAACCCTCTTTCTCTCCTTCTCCTTCCTCTCCTTCTTCACAATCCCCATCTTCTCCCACCTCTTCTCCCCC CTCGACAACTACCTCATCGACTGCGGCTCCACCGCCCCCACCACCCTCATCGACAACCGCCCCTTCTCCGGCGACCTCAC CGGAAAACACACCCCACTCTCTTCCTCTTCCCACGTCGTCTCGATCCGGAACCAAAGCCCTCTCCCCGGTTTACCCTCAA TCTACCACACCGCTAGGGTCTTCACAAACCCTACAAGGTACTCGTTCCCCATCAAAGACAGAGGTACCCACATGGTTCGC CTTCACTTCCACCCCTTCGATTCCCCGAAACTCGATCTGGGTCGCGCTCAATTTCACGTCTTGGTTGATGGGCATGTCGT TTTGAGCAATTTTACCCGTTTGATGAAGACTGGCGGTGATGGAAACCCTAGGGTTGTTGAGTATCTGATCTGGGTCGATT CGAAAAAGCTTGTGATCGTGTTTGTGCCGAGTAAGGATTCGAAATTGGCGTTTGTGAATGCCATTGAGGTGATTTCTGCA CCCAAAGACCTTGTTCCTGTTAAAGCACAGTATTTGAATTTAGGAAATTTAGAGAGTTTTGATGGTTTGAACATGCAAGC ACTTGAAGTTGTGTATAGAGTCACTGTTGGGGGTCCTAAAGTTACCCCTTTTAATGATTCATTGTGGAGGACTTGGGTTA CTGATGATGAGTTTTTCAAATCAAGTGTTGGGTCTGAAAGAATTGTCTTTGGTGGTAGGATCAAGTATCAAGTTGGCGGT GCTAGTCGCGAAGTTGGACCGGATAATGTGTATAATAGTGCAAGGTTGATCAGGAGTAAGAATGATTCTGTTCCTAATGT GAATATGACTTGGGTGTTTTCAATTGTTGGAGGATACAAGTACCTGGTTAGGTTGCATTTCTGTGATGTTGCTAGCATTT CGCTTGGTTTGCTATATTTCAATGTTTATGTCAATGGCTATTTAGCTTCTGAAGACTTGGATCTCTCTTACATGACAAAT TCACTGGCTTCCCCTTATTATGCTGACTTTGTTGTTGATGGAGATAGCAGCACAGGGACAGGGGCACTGAGTGTTAGTAT TGGTCCTTCTAAAAACAGCATTCCTCATGTCATTGATGGTATATTGAATGGAGTTGAGGTTATGAAGATGAATAACTCGC GTAATAGTCTTGATGGAGATGTTTGTGCTGGTTTTGTTATGCAGAGCTGGTCAAGTGGAAATTCAGGTATTGTGCTAACT TTCATGGCTGCTGTTTGCATTGTGTTAAGCTTAGCCATAGTGATTCGTAGGAGGATGGTTGAGTCTAGGGAATCTGTATC ATGGTCAAGGTTGCCTGTGAATTTATCGGATGATAATGTTAAAACCAGCAATATATAG
Protein sequence (LotjaGi1g1v0479700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLPSLCESVWAQLTHSSLHTSLLPHNKTMEPLSISTQSPSSSSSLFTSQSTMEFTRKTLFLSFSFLSFFTIPIFSHLFSP LDNYLIDCGSTAPTTLIDNRPFSGDLTGKHTPLSSSSHVVSIRNQSPLPGLPSIYHTARVFTNPTRYSFPIKDRGTHMVR LHFHPFDSPKLDLGRAQFHVLVDGHVVLSNFTRLMKTGGDGNPRVVEYLIWVDSKKLVIVFVPSKDSKLAFVNAIEVISA PKDLVPVKAQYLNLGNLESFDGLNMQALEVVYRVTVGGPKVTPFNDSLWRTWVTDDEFFKSSVGSERIVFGGRIKYQVGG ASREVGPDNVYNSARLIRSKNDSVPNVNMTWVFSIVGGYKYLVRLHFCDVASISLGLLYFNVYVNGYLASEDLDLSYMTN SLASPYYADFVVDGDSSTGTGALSVSIGPSKNSIPHVIDGILNGVEVMKMNNSRNSLDGDVCAGFVMQSWSSGNSGIVLT FMAAVCIVLSLAIVIRRRMVESRESVSWSRLPVNLSDDNVKTSNI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 58 | 58 | - | – | |
| Phobius | 59 | 78 | 20 | - | – | |
| PANTHER | 59 | 524 | 466 | 1.1E-203 | – | |
| TMHMM | 59 | 78 | 20 | - | – | |
| PANTHER | 59 | 524 | 466 | 1.1E-203 | – | |
| Phobius | 79 | 475 | 397 | - | – | |
| Gene3D | 83 | 257 | 175 | 1.2E-8 | – | |
| Pfam | 86 | 450 | 365 | 1.4E-34 | ||
| Gene3D | 266 | 432 | 167 | 2.3E-5 | – | |
| TMHMM | 473 | 495 | 23 | - | – | |
| Phobius | 476 | 495 | 20 | - | – | |
| Phobius | 496 | 525 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0479700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…