Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024788
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 94 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.529s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
2 domain predictions
 –
Lj0g3v0115159.1
n.a. PREDICTED: probable receptor-like protein kinase At4g39110-like [Glycine max] gi|356542359|ref|XP_003539634.1| chr0 50578610 50582102 -
2 domain predictions
 –
Lj0g3v0188189.1
n.a. FERONIA receptor-like kinase [Glycine max] gi|351724969|ref|NP_001237588.1| chr0 91898560 91901439 -
2 domain predictions
 –
Lj0g3v0196229.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740-like [Glycine max] gi|356559015|ref|XP_003547797.1| chr0 95686819 95693065 -
2 domain predictions
 –
Lj0g3v0249939.1
n.a. Kinase-like protein [Medicago truncatula] gi|357454055|ref|XP_003597308.1| chr0 129568127 129572119 -
2 domain predictions
 –
Lj0g3v0266779.1
n.a. Mitogen-activated protein kinase HOG1 [Medicago truncatula] gi|357513567|ref|XP_003627072.1| chr0 138227354 138230676 +
2 domain predictions
 –
Lj0g3v0276029.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X1 [Cicer arietinum] gi|502164205|ref|XP_004513081.1| chr0 143146225 143151476 -
2 domain predictions
 –
Lj0g3v0286449.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880-like [Glycine max] gi|356556621|ref|XP_003546622.1| chr0 148819423 148823480 -
2 domain predictions
 –
Lj0g3v0314489.1
n.a. PREDICTED: receptor-like protein kinase FERONIA-like [Cicer arietinum] gi|502148875|ref|XP_004507304.1| chr0 164149847 164152145 +
2 domain predictions
 –
Lj0g3v0346559.1
n.a. PREDICTED: receptor-like protein kinase THESEUS 1-like [Glycine max] gi|356543264|ref|XP_003540082.1| chr0 181802771 181806732 +
2 domain predictions
 –
Lj1g3v2533770.1
n.a. FERONIA receptor-like kinase precursor [Glycine max] gi|351726958|ref|NP_001237656.1| chr1 29029722 29034240 +
2 domain predictions
 –
Lj1g3v2534940.1
n.a. FERONIA receptor-like kinase [Medicago truncatula] gi|357477625|ref|XP_003609098.1| chr1 29085034 29086458 +
2 domain predictions
 –
Lj1g3v2738190.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like [Cicer arietinum] gi|502105313|ref|XP_004492776.1| chr1 31458384 31460770 -
2 domain predictions
 –
Lj1g3v4996200.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Cicer arietinum] gi|502113633|ref|XP_004494710.1| chr1 60679629 60682812 -
2 domain predictions
 –
Lj2g3v0322770.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like, partial [Cicer arietinum] gi|502120055|ref|XP_004496832.1| chr2 5389361 5392675 -
2 domain predictions
 –
Lj2g3v0636810.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g59680-like isoform X1 [Cicer arietinum] gi|502164954|ref|XP_004513345.1| chr2 10336474 10340345 -
2 domain predictions
 –
Lj2g3v1102970.1
n.a. n.a. chr2 17760528 17766202 -
2 domain predictions
 –
Lj2g3v1226740.1
n.a. PREDICTED: receptor-like protein kinase FERONIA-like [Glycine max] gi|356502649|ref|XP_003520130.1| chr2 19522075 19525318 +
2 domain predictions
 –
Lj2g3v1226750.1
n.a. n.a. chr2 19525691 19530089 -
2 domain predictions
 –
Lj2g3v1902230.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like [Glycine max] gi|356575998|ref|XP_003556122.1| chr2 28215800 28218259 -
2 domain predictions
 –
Lj3g3v2718830.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357454715|ref|XP_003597638.1| chr3 33211640 33217419 -
2 domain predictions
 –
Lj3g3v3132890.1
n.a. PREDICTED: receptor-like protein kinase HERK 1-like [Glycine max] gi|356542591|ref|XP_003539750.1| chr3 39032314 39035838 -
2 domain predictions
 –
Lj3g3v3639930.1
n.a. PREDICTED: probable receptor-like protein kinase At5g59700-like [Vitis vinifera] gi|359486440|ref|XP_002275845.2| chr3 44323482 44326830 -
2 domain predictions
 –
Lj3g3v3639940.1
n.a. PREDICTED: probable receptor-like protein kinase At2g39360-like [Cucumis sativus] gi|449451880|ref|XP_004143688.1| chr3 44323863 44326830 -
2 domain predictions
 –
Lj3g3v3639940.2
n.a. PREDICTED: probable receptor-like protein kinase At5g59700-like [Vitis vinifera] gi|359486440|ref|XP_002275845.2| chr3 44323863 44326830 -
2 domain predictions
 –
Lj4g3v0473090.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51860-like [Glycine max] gi|356519607|ref|XP_003528463.1| chr4 7160660 7167790 +
2 domain predictions
 –
Lj5g3v0616170.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like [Glycine max] gi|356503698|ref|XP_003520642.1| chr5 8105165 8112815 +
2 domain predictions
 –
Lj5g3v0616170.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like [Glycine max] gi|356570730|ref|XP_003553538.1| chr5 8107467 8112815 +
2 domain predictions
 –
Lj5g3v1401620.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356533641|ref|XP_003535370.1| chr5 20851897 20852517 -
2 domain predictions
 –
Lj5g3v1401630.1
n.a. PREDICTED: receptor-like protein kinase ANXUR2-like [Glycine max] gi|356533641|ref|XP_003535370.1| chr5 20852585 20853304 -
2 domain predictions
 –
Lj5g3v1776180.2
n.a. PREDICTED: receptor-like protein kinase At3g21340-like [Cicer arietinum] gi|502118303|ref|XP_004496200.1| chr5 25333526 25338874 -
2 domain predictions
 –
Lj5g3v1988700.1
n.a. PREDICTED: probable receptor-like protein kinase At5g24010-like [Glycine max] gi|356575998|ref|XP_003556122.1| chr5 27936713 27940009 -
2 domain predictions
 –
Lj5g3v2057440.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357444307|ref|XP_003592431.1| chr5 29653388 29658092 -
2 domain predictions
 –
Lj6g3v1641160.1
n.a. Kinase-like protein [Medicago truncatula] gi|357448519|ref|XP_003594535.1| chr6 18518883 18522341 -
2 domain predictions
 –
Lj6g3v2007180.1
n.a. PREDICTED: receptor-like protein kinase At3g21340-like [Cicer arietinum] gi|502078008|ref|XP_004485811.1| chr6 23704976 23711048 -
2 domain predictions
 –
LotjaGi1g1v0458500.1
n.a. Receptor-like kinase; TAIR: AT3G51550.1 Malectin/receptor-like protein kinase family protein; Swiss-Prot: sp|Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA; TrEMBL-Plants: tr|I1N3A7|I1N3A7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0458500 LjG1.1_chr1 96197696 96201892 +
2 domain predictions
 –
LotjaGi1g1v0458500.2
n.a. Receptor-like kinase; TAIR: AT3G51550.1 Malectin/receptor-like protein kinase family protein; Swiss-Prot: sp|Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA; TrEMBL-Plants: tr|I1N3A7|I1N3A7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0458500 LjG1.1_chr1 96198345 96201029 +
2 domain predictions
 –
LotjaGi1g1v0479700.1
n.a. receptor-like kinase; TAIR: AT4G00300.1 receptor-like kinase; Swiss-Prot: sp|Q9FLW0|Y5241_ARATH Probable receptor-like protein kinase At5g24010; TrEMBL-Plants: tr|A0A151TB05|A0A151TB05_CAJCA Putative receptor-like protein kinase family; Found in the gene: LotjaGi1g1v0479700 LjG1.1_chr1 99185081 99187747 -
2 domain predictions
 –
LotjaGi2g1v0123500.1
n.a. Receptor-like protein kinase, putative; TAIR: AT5G24010.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FLW0|Y5241_ARATH Probable receptor-like protein kinase At5g24010; TrEMBL-Plants: tr|V7C243|V7C243_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0123500 LjG1.1_chr2 45253074 45256404 +
2 domain predictions
 –
LotjaGi2g1v0191100.1
n.a. Leucine-rich repeat receptor-like protein kinase; TAIR: AT5G59680.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9FN93|Y5596_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g59680; TrEMBL-Plants: tr|A0A0B2QSB5|A0A0B2QSB5_GLYSO Putative LRR receptor-like serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0191100 LjG1.1_chr2 62247996 62253525 -
2 domain predictions
 –
LotjaGi2g1v0228700.1
n.a. Receptor protein kinase, putative; TAIR: AT4G29180.2 root hair specific 16; Swiss-Prot: sp|C0LGR6|Y4291_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g29180; TrEMBL-Plants: tr|A0A0B2RLK7|A0A0B2RLK7_GLYSO Putative LRR receptor-like serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0228700 LjG1.1_chr2 68672496 68678201 -
2 domain predictions
 –
LotjaGi2g1v0228700.2
n.a. Receptor protein kinase, putative; TAIR: AT4G29180.2 root hair specific 16; Swiss-Prot: sp|C0LGR6|Y4291_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g29180; TrEMBL-Plants: tr|A0A0B2RLK7|A0A0B2RLK7_GLYSO Putative LRR receptor-like serine/threonine-protein kinase; Found in the gene: LotjaGi2g1v0228700 LjG1.1_chr2 68672881 68678204 -
2 domain predictions
 –
LotjaGi2g1v0267700.1
n.a. Receptor-like kinase; TAIR: AT3G51550.1 Malectin/receptor-like protein kinase family protein; Swiss-Prot: sp|Q9SCZ4|FERON_ARATH Receptor-like protein kinase FERONIA; TrEMBL-Plants: tr|A0A151RVU1|A0A151RVU1_CAJCA Receptor-like protein kinase FERONIA; Found in the gene: LotjaGi2g1v0267700 LjG1.1_chr2 73711136 73714718 +
2 domain predictions
 –
LotjaGi2g1v0281200.1
n.a. Leucine-rich repeat receptor-like protein kinase; TAIR: AT1G25570.1 Di-glucose binding protein with Leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9ZQQ7|Y2144_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440; TrEMBL-Plants: tr|K7K2R7|K7K2R7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0281200 LjG1.1_chr2 75339428 75347869 -
2 domain predictions
 –
LotjaGi2g1v0281200.2
n.a. Leucine-rich repeat receptor-like protein kinase; TAIR: AT1G25570.1 Di-glucose binding protein with Leucine-rich repeat domain-containing protein; Swiss-Prot: sp|Q9ZQQ7|Y2144_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440; TrEMBL-Plants: tr|K7K2R7|K7K2R7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0281200 LjG1.1_chr2 75340375 75347558 -
2 domain predictions
 –
LotjaGi2g1v0330500.1
n.a. Receptor kinase; TAIR: AT1G67720.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q8LKZ1|NORK_PEA Nodulation receptor kinase; TrEMBL-Plants: tr|Q8LKX1|Q8LKX1_LOTJA Receptor-like kinase SYMRK; Found in the gene: LotjaGi2g1v0330500 LjG1.1_chr2 80612722 80618932 -
2 domain predictions
 –
LotjaGi2g1v0357800_LC.1
n.a. Leucine-rich repeat protein kinase family protein; TAIR: AT1G28340.1 receptor like protein 4; Swiss-Prot: sp|Q9FZB1|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880; TrEMBL-Plants: tr|A0A151SAL0|A0A151SAL0_CAJCA Putative LRR receptor-like serine/threonine-protein kinase family; Found in the gene: LotjaGi2g1v0357800_LC LjG1.1_chr2 84972799 84979855 -
2 domain predictions
 –
LotjaGi2g1v0366800.1
n.a. Receptor-like kinase, putative; TAIR: AT3G46290.1 hercules receptor kinase 1; Swiss-Prot: sp|Q9LX66|HERK_ARATH Receptor-like protein kinase HERK 1; TrEMBL-Plants: tr|A0A1J7HCA0|A0A1J7HCA0_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0366800 LjG1.1_chr2 86408797 86412434 -
2 domain predictions
 –
LotjaGi3g1v0062000.1
n.a. Receptor-like kinase, putative; TAIR: AT4G39110.1 Malectin/receptor-like protein kinase family protein; Swiss-Prot: sp|Q9T020|Y4391_ARATH Probable receptor-like protein kinase At4g39110; TrEMBL-Plants: tr|I1LVC2|I1LVC2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0062000 LjG1.1_chr3 6551749 6554400 -
2 domain predictions
 –
LotjaGi3g1v0078000.1
n.a. Receptor-like kinase, putative; TAIR: AT5G54380.1 protein kinase family protein; Swiss-Prot: sp|Q9LK35|THE1_ARATH Receptor-like protein kinase THESEUS 1; TrEMBL-Plants: tr|A0A0L9ULL9|A0A0L9ULL9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0078000 LjG1.1_chr3 8597969 8606691 +
2 domain predictions
 –