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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0485900 |
| Transcript ID | LotjaGi1g1v0485900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Eukaryotic translation initiation factor; TAIR: AT1G73180.1 Eukaryotic translation initiation factor eIF2A family protein; Swiss-Prot: sp|O74965|EIF2A_SCHPO Eukaryotic translation initiation factor 2A; TrEMBL-Plants: tr|A0A1J7G1L6|A0A1J7G1L6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0485900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99904377..99910603) extracted from Lotus japonicus Gifu genome v1.2.
GTTTAATTAAGCTGTTTTCTCAAACGAACAACTTTAGACAACACTCAGCATGAGTTTTAATCCCTCAAAAATATTTTAAT CACGCCTAGTCCCTTTCACCTCTTCCTCCATAAGTCCATAACAAGCACACCACACAGATTCCGGCCACCGCCACCCACCA CCACACAAAAGGACTGTTGGCTGGCCACTCGCCCCTCGTAGCTGCTGCGCTTCATCTTCTTCTCGCCATCGCAGGTGCGT GCTCCCTCTTCTTCTCGCTTTGCTAGTGTTAGGGTTCACAACTTCACTCTTTCTCACTCTCCCTCTCTTCACTACGCCGC AATTGACATTTGAACTGTAGGTAGATTAGTAGATAGGTTTCTTCACCGTGAAAACGCTTCAATCACAGTACCTGTATTTT TCTTTCTTTAATCTCCAATTCAAACTGCAATGATTGAAACAGAAAAGTGAAAATTTACTCAAACCAATTGTGTTAAACAA ATGGGGTTTTTGTTTGTAGTTTAAAATCGGGTTAAAGCTGAAAACTTTCTCTGTTTTATCTCTATTAGTATATTACTAGA CGCTTAGCCCAAATATTGATGACAAGTTCACAATGCATTTTGAGATGCAAGTTTGTTCCTTTTTTTTTTTACCCCTTTTG ATTTGAAGTTATATTTTTGCATTGATAGTACATTCAAACCTTCAAAGTTATGTTTTTGTTCCCAGGCCAAGCTTTCATTG TTAGCATTCTATCTGCATTTCTGCCCCCCAGGTTCTAATGGCATCAGATGGCCAAACACCGCCTCTCGAGATATTAGGTA TTGACTAATTGGCTTCTTGATTCAGTTTTCATGTTAGTGGGACTCTCGTCTTTTATTTATTTGGTTGTTTATTTTTCGTT TTTGCTTCTCTTTCGTACACTCTCTCAGTTCGAGGGCCGGAAGAATTCTCAATCTGGACTGGACCCCCGTTTGCCAATGG TCAACCTGGTATCAAGCTTGAAAAGGTTAATTGTACGAGTGCGAAATATAGTGATGATGGATCTCGGCTTATGGTGATGA AATCCAACTCTGTGATTAGTGTGTATGATTGTAGAACTGCTAAAGAGGTAAAGTCTTTTGAAGTACCTAATGTTATGGCT GCTATCCTGTCACCACGCGGGACTTATTTGCAAATCTTCAAAAAACCTTCGGGGCCCCAAGATAAGAATGTGGCACTCTG GAAGACGGAGACTGGTGACCCTGTTTATCAACACTCCCAAAAGAACTTGACAAAAAACAATTGGTAGAGTTCTCACTATG GGTTCATTATGGCGCCGCATGTTCATGTGTTGATGAATGCCTTACATTCTCGCCGCTGCTTATGTTTTAACTGTCACAAT GTCTGTTGTTCAGGCCTGTGATTCAATTCAGCTCTGATGAAGCTACTGCGTGCCGGTTGGCAACTAATGAGGTGCAATTT TTTGATGCCACGGACTTCTCTAAAGGAGTTATCCAACGGTTAAGAGTTCCAGGAGTTGCTGCCATTGAGCTCTCTAGTTC ACCCGGGTCTCATATAGCTGCATTTGTTCCAGAATCCAAGGTTTGTGTCCATCAACATAATGCTTATCACTGAGGCTTAG TTCACTTTATGTGACCAGATGAATGAGAAATTGGTGCTATTGCAATTTGGTATGCTGCTGTTTAGGTATCTAATAAATAA AGTTCTGTGAACCATTGTAGGGAATTCCTGCTAGTGTGCAGATATTTGCTTGTGGAGATGCTTCTCAAAGCCAACCTATT GCTCGGAGGAGTTTTTTCCGATGTTCCAACGCCCAACTCAAATGGAATCATGGTTCAACTGGGCTTCTAGTGGTGGCGCA GTCGGACGTTGACAAAACTAATCAGAGTTATTATGGAGAATCAAAGTTATACTACCTGACAACAGATGGGAAGCATGAAG GACTTGTTCCTCTTCGTATGTTCTTATTACTAGTAAAAGAGGAACTTATAATTCCCTATATAATCTCCATAAGAAGGATA ACTTTTTTCATGTAAATAATTGGCAGGAAAAGAAGGGCCTATTCATGATGCTCACTGGTCATATTCTGGCTTGGAATTTG CCGTTGTATATGGCTGTATCCTTTTGTCTGTGATATATACGTTTTAGAGATAAACAATATGTACTGAAGTTTCAGCTTTT GTTATTTACTGAAGATCCCGTAACATTAAATACTGTGGCCTGATTTGATATTATTCAGAGGCAAAACTTATGGTAATGTC ATGGAACCATTTCTGCTAAAGCACTGAATTATTTTGCGATGATTTTAGACTTATGTTAGGAAATGCTTTTGAAAAAGTAT CAGGCTACTTCTTTCATCTTCTTGATATAAAAAACTAGTCCTTCTAATCTATGAATTTTTATAAGCCCTAATGATAACAA ACAACTACATAGTTCCGCTGCCTAATGAAATTTTCATTTTAAGAACTTAGGTGTTGGTTATTTGTGTCTGCATATATAAA TCATACTTTTATGGTTTTTTTTATAGATCTCTTGAGCACTTCACTTTTCCTGAACTCGTCTTAGTTATGCCTGCTAAAGC AACTCTGTTTGACAAGAACTGCAATCCTCTACTGGAGCTTGGAACTGGTCCTTACAATACTATTCGATGGAATCCAAAGG GAAGATGTATCCTCAACTAATGAATTGGCATTCACCATATTCAATAAAATTAATTTTAAGTCTTAGTCTTCAGGAGTTTT CATTCGTTTTCAATCAAATCTTTAAAGGGCCTTCGAGGGTATTGGCCTGGGGTTGGAATTCTGAAGTGACTCATTATTAT TTGATATAAGTATCCGAATCAGGGTAAGAGTAAAAAGTTATTGTATTTTGTGGCCTTGACCTTTGGTGTCCAGTTTTATG TTTGGCTGGCTTTGGTAACTTACCTGGTGACATGGTATGTTCTCCTGAGTCCTGACTGATCGAATCCTTATGCTTTCTTT TAACTTTTTGTTTTGGTGGAAGGAATTTGGTGCTTGATTCCCTTATCTAGAACTACTAAGTGCATGGTTGAATACACAGT GGAAACAGTGAGTCAAAATCCACGATGTATCCAAACACGCACTGGCTCACCTTATTATAAAATTAAATTATTACTTACAG TCACTTTTAGATGCTAAGTATCACTTAGAGATGAAATAATTGGTGCCTTTTCTTGCTTTTTGGCTCTTAGTACTGAATGC ATCTGTCGCTTTTCTCATTTTCATCTTAATTTTAAGTTTTGATGATTAACTGCAAGTGTATTTTCTTATTTTTAGCATTT TCCAAGTTTGCAAGATCAAAACATTAATTTTTTTTTTGCCAGTATATGCTGTACTTCCATATGACACATGCTCAAATTGG TGCAAGTATGCAAAAACATGCTATGTATAAGGAATCCATATGTTTTTCATGCTTACTTTATAGGTGTTCTGGGATTACGC GGATAAGAAACAGCTCGCAGCAACTAAGGCTGAATGGTCTGTTACAAGTGAATGGTCTCCGGATGGGTGCTATTTCATGA CAGCGACAACAGCTCCGAGGCTTCAAGTTGACAATGGGTATGTTACAATTGGCCATTAGTGGTCCTTGTTCTACTCGTTG CCTGAAAAATATCACGCAATTATGTTGCCAGTGTGATACATCATCCAGATTTGTTCCTTTGATTATCAATTATAGGTGAT CAATTTAAACAACATTTATCGGGTGATATAGGTCACTAACCAAATTAATTATTGGGAGAATATTTTGCTGATTGTTATAC GTTGGTTTCCACATGTTTTAATTTATTCACTAAGAAAGCATTTTGTTAATGTTATTTTATTCCATTGTAGGATCAAGATT TTTCACTACAATGGATCATTGTACTTCAAGAAGATGTTTGACAAGTTGTTCCAGGTTAGTCATGTCCTGAACTCTGATTA ATAAGTCCCCAAGTTTTTTCTATTACCTTTTTGCAGACATCACTGAATTGTTTGCGAACTATATACAGGCTGATTGGAAA CCAGAGTCGCCAAGTAAGTTTGGTGACATCGCTGAATTAATCAAGTCTATAGACTCGGTAAAACTTGAAGATAAAAAACC ATCAGGTTCATACACATATCCTAATATATCATCTAGTGATGAGTTATGTCTCTTTTGTTTTTTGAAGACCGTGGACTAAT TGCAGGTCAAGGACCAAAACCTACCCAGGCTGCTACAAAAGCCTCATCTGCCAACCCCCCTGCGCAAAAACCCGCTGCCT ATCGCCCACCACATGCTAAGACTGCAGCTGTTATACAGGCACAGGTACACAGTGACAATCTATGGCTATGCTCTTAATTG TCATTGTTTCTATTTAAATTGTCAATATAAATTATTATCAGCAACACTTTTGCATGGCGTTACTTATATGTAGTTATGAA TTATTTTGACCATTGTTAAAACTGGACCGGTTAAGGTCCATTTGAAGGAAAAACCGCTAGATTTCAGAATCGGTGAGAAC CGGATTAAAATTAGTGAAAACTGGACAAGGTAATTGAACTGGCGTGAACCAGCCATATTTCAAAAGTTGCCAAAAAATCA AATTTTTAATACTTTTTGTTTAAATTTAAGAAAAACATATTTTATTCTAATAAAAGTCAAAGGTCAAGTTATAATACCCA TGTATATATGAATTATCATTATTTTTATCTTTTTTTCATTTCTATCTTATAAAATATAACATATGATGATTTTATGTCAA TTTAAAATTTAATTTGACTTAATTTCTTAACATTTTATGTTAATAAATTATTTAATATATGTTATACAATACTAAAAACC TATATTTAATTATCACCGGTTCAACTGAACTGTGAACCAATGACTTCACTGATTCACTGAACGGAGTTTTAAAATATTGG TTGAGACCCTTTTTAGTGGTTGATCCGACATGCATGTTTATGCATCTTCCAATAAATTCTTGGAGTTGAGTTTCATTTTG GTTAATGTTCTAATGATGTCAAAATGATTTTGTATCTGCAGCTACTTGGAGAGAGCCCTTCAGAGTAAGTCCCTTTCTCT CTTCCCCTCTTCGTTATATGCTTCTTATGATTTACATTCTTTTAATTAAATGCTTGTTGTTGATTAATTTAGAACATTGA GCAAGAATGCTTTACGAAACAAGAAAAAAAGGGAGAAGAAAAAGGCGGCTACAGATGCCAGTTCTTCATGACTGAATCAA GATTCTCTCTGGCTCACTCAAGATTCCTTCTCTATTACTGCACTCAAATGCATGAGAATTTGAGGGTTTTGGTTTAAGCT TCCTGAATTTAATTGTATCACGTCCCTGGCAGAGAACTTTAGGCAATTTTGGTTTGTTTGGATCTTTGAGATCATTGAAG TTTTGTTTTATATGTTTTGTGCTTTCTTTAATTTATAATTGGGATATAGTATTAGTGGTGAGAGTAGAAGATAAATCTTT TATGTGCAATTCTAAGGTGGGCTATGTTAAAAAATGGTCCATGATATGTTATTTACAATATTCTCATTATATTCTAAAAT TAATTTGCAGGGATGCCCTGTTTAACTTGTGGACTATGCTTTTCTTAATTCATGAGCGTTTATGTTACAAAACAAGCTCA TTTCAAACGAGACTTAGTCATTTACAAGATACTAGAATCACATCAATTTTCATCAATACAGTGAATGAGTGAAGCACACT CCAAAGTTTTCCACTCCAAAGTTTCCTATAAGTTTTTTAGCCGGATTAAATTTTTGTTAGAAGCCTTCAAATGTCCTAAA TATTTGTGAATAGAGATAAAAACGATGTTTCACTCAACCTTATCATGTCATCGTACGAGGGATTACACTTGAGCTGCACC TCTCAACTTCCTCCATTTCATATCAAAATGCCTCACTCACTTTACCATTCATCATGCTTATTGTTTCAGCATGATGACCC CTCAAGGCCTTCCCGTTATCACCAGAGTCACAGCCTATCTCAGACTTCCATCTCCTTCTCTCTACAAAAACTCTCTCATC TTCTCCAAAACCCAGCCTTCAATCAATTCTGGTTCCTATTTAAGAAAGAAACCAAACAGCACCTTCATCTAAGATTGCCC TGAAATTTTCTAGTAAATCATACAACAATAGTAGAAAAAGAGAAGAGGAAGTGAAAGAAGAAGAGTGGACGAGGCTTACA TCAACAAATGGAGAAAGCAAAAGAAAAAGGAACATAATTTCAAGATTACAGTCTTGTTAAGCATCAC
CDS sequence (LotjaGi1g1v0485900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCATCAGATGGCCAAACACCGCCTCTCGAGATATTAGTTCGAGGGCCGGAAGAATTCTCAATCTGGACTGGACCCCC GTTTGCCAATGGTCAACCTGGTATCAAGCTTGAAAAGGTTAATTGTACGAGTGCGAAATATAGTGATGATGGATCTCGGC TTATGGTGATGAAATCCAACTCTGTGATTAGTGTGTATGATTGTAGAACTGCTAAAGAGGTAAAGTCTTTTGAAGTACCT AATGTTATGGCTGCTATCCTGTCACCACGCGGGACTTATTTGCAAATCTTCAAAAAACCTTCGGGGCCCCAAGATAAGAA TGTGGCACTCTGGAAGACGGAGACTGGTGACCCTGTTTATCAACACTCCCAAAAGAACTTGACAAAAAACAATTGGCCTG TGATTCAATTCAGCTCTGATGAAGCTACTGCGTGCCGGTTGGCAACTAATGAGGTGCAATTTTTTGATGCCACGGACTTC TCTAAAGGAGTTATCCAACGGTTAAGAGTTCCAGGAGTTGCTGCCATTGAGCTCTCTAGTTCACCCGGGTCTCATATAGC TGCATTTGTTCCAGAATCCAAGGGAATTCCTGCTAGTGTGCAGATATTTGCTTGTGGAGATGCTTCTCAAAGCCAACCTA TTGCTCGGAGGAGTTTTTTCCGATGTTCCAACGCCCAACTCAAATGGAATCATGGTTCAACTGGGCTTCTAGTGGTGGCG CAGTCGGACGTTGACAAAACTAATCAGAGTTATTATGGAGAATCAAAGTTATACTACCTGACAACAGATGGGAAGCATGA AGGACTTGTTCCTCTTCGAAAAGAAGGGCCTATTCATGATGCTCACTGGTCATATTCTGGCTTGGAATTTGCCGTTGTAT ATGGCTTTATGCCTGCTAAAGCAACTCTGTTTGACAAGAACTGCAATCCTCTACTGGAGCTTGGAACTGGTCCTTACAAT ACTATTCGATGGAATCCAAAGGGAAGATTTTTATGTTTGGCTGGCTTTGGTAACTTACCTGGTGACATGGTGTTCTGGGA TTACGCGGATAAGAAACAGCTCGCAGCAACTAAGGCTGAATGGTCTGTTACAAGTGAATGGTCTCCGGATGGGTGCTATT TCATGACAGCGACAACAGCTCCGAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTACAATGGATCATTGTACTTC AAGAAGATGTTTGACAAGTTGTTCCAGGCTGATTGGAAACCAGAGTCGCCAAGTAAGTTTGGTGACATCGCTGAATTAAT CAAGTCTATAGACTCGGTAAAACTTGAAGATAAAAAACCATCAGGTCAAGGACCAAAACCTACCCAGGCTGCTACAAAAG CCTCATCTGCCAACCCCCCTGCGCAAAAACCCGCTGCCTATCGCCCACCACATGCTAAGACTGCAGCTGTTATACAGGCA CAGCTACTTGGAGAGAGCCCTTCAGAAACATTGAGCAAGAATGCTTTACGAAACAAGAAAAAAAGGGAGAAGAAAAAGGC GGCTACAGATGCCAGTTCTTCATGA
Protein sequence (LotjaGi1g1v0485900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASDGQTPPLEILVRGPEEFSIWTGPPFANGQPGIKLEKVNCTSAKYSDDGSRLMVMKSNSVISVYDCRTAKEVKSFEVP NVMAAILSPRGTYLQIFKKPSGPQDKNVALWKTETGDPVYQHSQKNLTKNNWPVIQFSSDEATACRLATNEVQFFDATDF SKGVIQRLRVPGVAAIELSSSPGSHIAAFVPESKGIPASVQIFACGDASQSQPIARRSFFRCSNAQLKWNHGSTGLLVVA QSDVDKTNQSYYGESKLYYLTTDGKHEGLVPLRKEGPIHDAHWSYSGLEFAVVYGFMPAKATLFDKNCNPLLELGTGPYN TIRWNPKGRFLCLAGFGNLPGDMVFWDYADKKQLAATKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYF KKMFDKLFQADWKPESPSKFGDIAELIKSIDSVKLEDKKPSGQGPKPTQAATKASSANPPAQKPAAYRPPHAKTAAVIQA QLLGESPSETLSKNALRNKKKREKKKAATDASSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 5 | 514 | 510 | 7.5E-167 | ||
| PANTHER | 9 | 512 | 504 | 1.4E-191 | ||
| SUPERFAMILY | 41 | 395 | 355 | 4.71E-21 | – | |
| Pfam | 217 | 410 | 194 | 1.2E-76 | ||
| MobiDBLite | 434 | 514 | 81 | - | – | |
| MobiDBLite | 445 | 459 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Translation initiation factor activity | Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide. | ||
| Biological process | Translational initiation | The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA. |
Expression pattern of LotjaGi1g1v0485900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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