Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0490200 |
| Transcript ID | LotjaGi1g1v0490200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TPR repeat-containing protein ZIP4; TAIR: AT5G48390.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|B0M1H3|ZIP4L_ARATH TPR repeat-containing protein ZIP4; TrEMBL-Plants: tr|G7KSH2|G7KSH2_MEDTR SPO22/ZIP4-like meiosis protein; Found in the gene: LotjaGi1g1v0490200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:100349172..100354215) extracted from Lotus japonicus Gifu genome v1.2.
GAAGAAAACCAGTCATTCAAAATTTCCCGCCAAAGAGATGAGAATTGCCGAGGTATCAACGCCGGAGCTCCGCCAAATCC AACGTGACACGGAGGCTGACCACCACCGTCTCCTCTCACAAATCGAGGTCACCGTCAAACATCTCGAAGCCCACTCCACC GACAAACCCCCGCCGGCCACCGCCGCCGATGAACTCCGTCGGTTCGTCACTCAGCTGAGTCAACTCGCTCCATTTTCCAA CTCCTTCAAGCTTCTGATCTGGAAACTCAGCTACCGCCTCTGGAACGCCTGCGTTGACATCTCCAACACCGCCACCATCC GATCCTCCCCGTCAACCACCGAAGCTGCCGCCGTAACCCACGCAAAACTCCGTCACATCACCGCGGACCTCCTCTCCATC GCCGGCGAAGTCTCTGGCGTCCCTTCTCCGGCGATCAAGGCGGCGTCGTTCTACTACAAGACCGGTTTGATATGGCACAA CCTCCGGAGATTCGACCTTGCCGCGAAATGCTTCGAGCGAGCCACCGATCTGGTCTCGAAGCTCGACGTCGCTTCGATTT CCGACGCCGGAGAGCGGAAACTGCTGCTGGACCTGAATCTAGCTCGGTCCCAAACCGCGTGGGAGGTTCGGGACCCGAAC CTCGCGGTTGCGCTGCTGAATCGGAGCAAGGGCTTGCTATTCGGTTGCAGCGAGCATCACAAGGAGCTCGCGAAGCAGTT CATGGCGTTTGGCAAGAGCTCGTTGTCGAGTAATCGCGATTTGGGTGAAGCGCTGAAGCTGATGAACGAGGCGTTGGAGG GTTGCGAGAAGGGATTAGGTGTGGCGAGAACACGGGAAGAGAAGGTGGAGATCAGAGGGTTGAGGTGGAAGGTGTTGAGG TTCATCGCCGCGATTCATCTGCAGAAGGAGGAGTATGAGAGTGTGGTGAAGTGTGTGAAGGTTCTGAGAGATTCCGCTGA TGGCGGTGATGATCACCCGAGCCTTTCGGTGCTGGCGATGAAGGCGTGGTTGGGGTTGGGGAGGCATGTTGAAGCGGAGA AGGAGCTGAGGGGAATGGTGATTGATCGAGGGATTCCGGAGGGTGTTTGGGTTTCGGCGGTGGAGGCGTATTTTACTGCG GCGGGGACGGCCGGGGCGGAAACGGCGAAAGGGGTTTTCTTGGGGCTGTTGGGAAGGTGTCATGTCAGTGCCGGCGCTGC GGTGAGGGTGGCGAATAGGGTGCTTGGTGGTAGTGGAGGCGGTGAAGGAGGAAGAGTGAGGGCTAAAGTGGTGGCTGAGC TTGTGTCTGATGAAAGGGTGGTGGCGCTCTTTGCAGGAGAGAAAGCTGCTAAGGATAGGGTGGCAATGCATGCTATTCTG TGGAATTGGTATGACTCTTTGATCCAGTCCTAATCTGTTTCTTCTGTAGTTGCATATATTTGAATGTGGTTTGTGCCCTA TGCAATATGAACTACGGGGTCTGTCTTTAACAGTCAAACTTCAAATTTGGATGTGTTTGAATTGAATTTGTGTTATCTTC CATTTTTTCCACCCTAAATGTTTTCACAAGAAAATATGCAGTTAGTGTGTGATTGAATGGACCAAAGTTTTTTTGTTGGT GGTCAAATTGCCAGCTTTGTGGGATAGCTTTCATGGTTCAAGTGATGTTAGAGAACATAGCAACTCCCTATTCATTTCCT TGTTTCTTTGATGTGATGCAAAACTATTACTGATCTGAATGCATGTTTGGTGGATGCTGCATGAGCATTAAGCTTCCTTA TTGTGTGTGTCCTCTGACTCGTGAGAAATTTTAGTCTATGCAAGTGTGATAGAAAGATATAGTTAAAATCATATTCAGTG GGGAAGTAATAAGTCACTTTTTAGTGCTTTCTCCCTGATTCCTAGCTCTACTGCAGAAAGTAAACCTTGAAATGGCAGCA GTCTCAAACATTGAAGAATTAGGTGAGAGATCAACCATAAGTATGCCTATGCAGTGTTAATGTGTGTGATTTTAGCGCAA AAATATACCTGCAGCTGCACTGATTATGTTATTAAGCACTGCATCATCTTCTTTACTTCGCATGGCACATTTTAAGTTAA TCTAGGATGATCCTTTTCTGTTGCTATCCAATGGAGTCTTCACAGATAACCACTACCTAGGAGACTAAGCTTTGTTTTAC TTTTGGCTTTATCTGCTGCTATCAGAGTATTTTAATTTTTCATGACCTCTATTTTCTTTATCCTGCTGAGAGAATCCTAT TTCCATGTTTTCAAAATAAGAAGATGAACATTCCCTCTATTTTCCTGGTTGAAGCACATAGATATTCCCTCTCATATTTT CAGAATTCATTAATGGATATCATTCTCAAAGCTTTAATATCGGTTACCTGATTGATATTTGCATTACTTATGAATTGGCA ATATCTAGGAAGAATCTCTCTTCAAATGAGGTCACAATATTTTTCCGTGATTTTCAGTGGTGCTGATAGTTTTCAATCAA AAGACTACGAGACCAGTGCTGAACTCTTTGAAAAATCTATGCTATACATTCCATATGACACAGAGAATAGAATACTTCGA GCCAAGGGCTTTCGAGTTTTATGCCTCTGCCACCTTGGTCTCTTGCAGCTGGATCGCGCTCAAGAATACATTAATGAGGC TGAAAAGGTATTGTTATTGACAACTACAATCTTGAATTTGCTGCTTTAACTTTCCTTCGAATATGAAATAATTCCATGCT TTTCCATATGCAGCTTGAACCCAACATTGTCTGTGCTTTTCTTAAGGTACATCTCTATCTCTACACATCTGTTAGTGCTT CCTTCTATGTGTCAAACATTATGTATACATGAATATAGATGGCCGAAAACATCAGACAAATTTATATTTCTTACTGATAA TTGGATTCTGTGAAGATACTTCACATTAGATTTCCTTTGTAATACTTTAAGCTAGTTACAACTCAGGATAATGTTTATAA TTAGCATGACATAATTACTAATATTGACATTTCATTTGTTTTAACTCAGTTCAAAATTTTTCTCCAAAAGAAAGATCACC AAGGTGCTATTAATCAAATTGAAGCGATGACTGCGTGCCTTGACTTTCAACCAGAATTTCTCTCACTTTCAGCCCATGAA GCTGTTGCTTGCCATGCTCTAACAGTTGCCGTTGCCTCTCTATCTAGTATGCTAAACTTTTATGCTTCAGGAAAGTCCAT GCCTACTGCAGAAGTAACAGTTTTGCGCACCTTGGTAACAGTCCTCTCTCAAGAACAAGGTAATGAGCAGCAAGTCCTCA AATTTTTAAAACGCGCCCATACACGAGCATCTGAGCTTGGTCCTGATTGCTTCTTTGGAAAAGAGGAGGTTGGGAAACGG GAGCGCAACTGGTTTGCTGTGACTTCATGGAACTTCGGTAGAAAAACCGGGCAGGATAAGAACTATGAACTGTCAGCCGA ATTCTTAAGACTGGCATCAAATTTTCATGCTCTAGTTAAAGAGTCTGATACTGAGAACAATGTCATGGTTTGTAAATCGT TAGTGCTTTCAGCATCATCAATGATAGCTTTAGAATTTGAAAGGAAGACTGCTTTGTCAGAAACTGAAGTCAAGCAAGCT GCACATTTGCTAGATAGAGCGGGGCAGGTATGCAAATTGTTTCCTTTACTGAAAGTGAAAGTATTCTTAATAGTTTATTG ATAATTGATTAATTTAGAAGTACAATATTTTTAAACTAAGTTCATAGAGGTTTATTAGTGCTAAGAGAAGTTGCTTCTGT CCACTTTGATTTTAGCTTTACCAAGGTTTTTGAACGAGTTTCCAAACATGTGCTTCTACTACAAACTCTAAACAATAAAT TTTTCATATCCTAATCTGTCATAACAGAGAAATATCTTATCACAACTATATATTCTGTCCTAGTGTATAATTACAGAACC ATAACATATCTGAATATATCTCAACATCCTTCATTACATAATGCTCGCTGCATTAGTCTTTTGCAAATGGGTCAAGTTGA CATGATGCCTAAAATGCTGTATCATACTATAAAATACCACCCTTTTAAGTTCATACTTTAATTTTCAGCTCTGTTGGATA TTATCTTGCTCTACTCTTATGTGGATGCAGATGCTAAAGTCAATTTCATCTGGGAACTCTGCTAACGATGACCAGATTAA TTCCATGGAGCCTGATCTTTTTTTCATGTACACTTTCTGTGCATTTGATATACAAGGCAGGCTCAATAACTCAGGATCAC AACTCCTCATTGTGAAAAGTTTTGCCAGTTCAAAGTTTTGCAAACCCCAGCACCTCCTTCAGATTGGCCTCTCTGCCTCA CAGGGACCGCGGTCTAATCACGAAGTAGCCACGTTTGCTCTAAATGAGTGCCTCTCATCTTTCCTTTCATCACCAGTTCC AGATTATCAGAATATTGCTCTTGTTGTCCGCAAGCTCATAGCCATTGCCAGCATTCACAAGGGTGATAACAATGACGATG TTGTACATAGCATGTACAAGCAAGCCAAGGGGATAATGGTTGGATTAAAGGAAGGCGAGTATCCGATTGAAGAAGGAAAG TGGCTTTCCATGACTGCGTGGAACCGAGCAGCGGTGCCAGTGAGGTTGGGTCAGCTTGAAATGGGGAAGAAATGGATGAC TGTGGGGTTGGACATTGCAAATCATGTTCCAGGCATGGAAACTTACAAAGCATGCATGGAAGATCTCCTTAGGAATTTGG AGAAAAAACTTTGATATGCATGAATTTCAAATCCAGTTTCTAGCAGTTACAGAATCCATACATATCATGTATAGGAAAGA AGCCTATAAAAATGTAGATAATATTGATTTTTCATTGAGAATGTTCTATAAGGATCATATGAGCTGGTTTTGACTGCCAT GTCCTTGTTGTTGAATTTATATATATAGAGTAAGCATAGCAGAAACTAATTGACCAACAAAACATGTTAATATCTTATGC TCCCATTTATTTTGGTCATCCAAAAGAAACATACTATTGTCAGATATGACCCATTAATTGTTCAGTGAAAGTATGATGCT TGAG
CDS sequence (LotjaGi1g1v0490200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAATTGCCGAGGTATCAACGCCGGAGCTCCGCCAAATCCAACGTGACACGGAGGCTGACCACCACCGTCTCCTCTC ACAAATCGAGGTCACCGTCAAACATCTCGAAGCCCACTCCACCGACAAACCCCCGCCGGCCACCGCCGCCGATGAACTCC GTCGGTTCGTCACTCAGCTGAGTCAACTCGCTCCATTTTCCAACTCCTTCAAGCTTCTGATCTGGAAACTCAGCTACCGC CTCTGGAACGCCTGCGTTGACATCTCCAACACCGCCACCATCCGATCCTCCCCGTCAACCACCGAAGCTGCCGCCGTAAC CCACGCAAAACTCCGTCACATCACCGCGGACCTCCTCTCCATCGCCGGCGAAGTCTCTGGCGTCCCTTCTCCGGCGATCA AGGCGGCGTCGTTCTACTACAAGACCGGTTTGATATGGCACAACCTCCGGAGATTCGACCTTGCCGCGAAATGCTTCGAG CGAGCCACCGATCTGGTCTCGAAGCTCGACGTCGCTTCGATTTCCGACGCCGGAGAGCGGAAACTGCTGCTGGACCTGAA TCTAGCTCGGTCCCAAACCGCGTGGGAGGTTCGGGACCCGAACCTCGCGGTTGCGCTGCTGAATCGGAGCAAGGGCTTGC TATTCGGTTGCAGCGAGCATCACAAGGAGCTCGCGAAGCAGTTCATGGCGTTTGGCAAGAGCTCGTTGTCGAGTAATCGC GATTTGGGTGAAGCGCTGAAGCTGATGAACGAGGCGTTGGAGGGTTGCGAGAAGGGATTAGGTGTGGCGAGAACACGGGA AGAGAAGGTGGAGATCAGAGGGTTGAGGTGGAAGGTGTTGAGGTTCATCGCCGCGATTCATCTGCAGAAGGAGGAGTATG AGAGTGTGGTGAAGTGTGTGAAGGTTCTGAGAGATTCCGCTGATGGCGGTGATGATCACCCGAGCCTTTCGGTGCTGGCG ATGAAGGCGTGGTTGGGGTTGGGGAGGCATGTTGAAGCGGAGAAGGAGCTGAGGGGAATGGTGATTGATCGAGGGATTCC GGAGGGTGTTTGGGTTTCGGCGGTGGAGGCGTATTTTACTGCGGCGGGGACGGCCGGGGCGGAAACGGCGAAAGGGGTTT TCTTGGGGCTGTTGGGAAGGTGTCATGTCAGTGCCGGCGCTGCGGTGAGGGTGGCGAATAGGGTGCTTGGTGGTAGTGGA GGCGGTGAAGGAGGAAGAGTGAGGGCTAAAGTGGTGGCTGAGCTTGTGTCTGATGAAAGGGTGGTGGCGCTCTTTGCAGG AGAGAAAGCTGCTAAGGATAGGGTGGCAATGCATGCTATTCTGTGGAATTGTGGTGCTGATAGTTTTCAATCAAAAGACT ACGAGACCAGTGCTGAACTCTTTGAAAAATCTATGCTATACATTCCATATGACACAGAGAATAGAATACTTCGAGCCAAG GGCTTTCGAGTTTTATGCCTCTGCCACCTTGGTCTCTTGCAGCTGGATCGCGCTCAAGAATACATTAATGAGGCTGAAAA GCTTGAACCCAACATTGTCTGTGCTTTTCTTAAGTTCAAAATTTTTCTCCAAAAGAAAGATCACCAAGGTGCTATTAATC AAATTGAAGCGATGACTGCGTGCCTTGACTTTCAACCAGAATTTCTCTCACTTTCAGCCCATGAAGCTGTTGCTTGCCAT GCTCTAACAGTTGCCGTTGCCTCTCTATCTAGTATGCTAAACTTTTATGCTTCAGGAAAGTCCATGCCTACTGCAGAAGT AACAGTTTTGCGCACCTTGGTAACAGTCCTCTCTCAAGAACAAGGTAATGAGCAGCAAGTCCTCAAATTTTTAAAACGCG CCCATACACGAGCATCTGAGCTTGGTCCTGATTGCTTCTTTGGAAAAGAGGAGGTTGGGAAACGGGAGCGCAACTGGTTT GCTGTGACTTCATGGAACTTCGGTAGAAAAACCGGGCAGGATAAGAACTATGAACTGTCAGCCGAATTCTTAAGACTGGC ATCAAATTTTCATGCTCTAGTTAAAGAGTCTGATACTGAGAACAATGTCATGGTTTGTAAATCGTTAGTGCTTTCAGCAT CATCAATGATAGCTTTAGAATTTGAAAGGAAGACTGCTTTGTCAGAAACTGAAGTCAAGCAAGCTGCACATTTGCTAGAT AGAGCGGGGCAGATGCTAAAGTCAATTTCATCTGGGAACTCTGCTAACGATGACCAGATTAATTCCATGGAGCCTGATCT TTTTTTCATGTACACTTTCTGTGCATTTGATATACAAGGCAGGCTCAATAACTCAGGATCACAACTCCTCATTGTGAAAA GTTTTGCCAGTTCAAAGTTTTGCAAACCCCAGCACCTCCTTCAGATTGGCCTCTCTGCCTCACAGGGACCGCGGTCTAAT CACGAAGTAGCCACGTTTGCTCTAAATGAGTGCCTCTCATCTTTCCTTTCATCACCAGTTCCAGATTATCAGAATATTGC TCTTGTTGTCCGCAAGCTCATAGCCATTGCCAGCATTCACAAGGGTGATAACAATGACGATGTTGTACATAGCATGTACA AGCAAGCCAAGGGGATAATGGTTGGATTAAAGGAAGGCGAGTATCCGATTGAAGAAGGAAAGTGGCTTTCCATGACTGCG TGGAACCGAGCAGCGGTGCCAGTGAGGTTGGGTCAGCTTGAAATGGGGAAGAAATGGATGACTGTGGGGTTGGACATTGC AAATCATGTTCCAGGCATGGAAACTTACAAAGCATGCATGGAAGATCTCCTTAGGAATTTGGAGAAAAAACTTTGA
Protein sequence (LotjaGi1g1v0490200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRIAEVSTPELRQIQRDTEADHHRLLSQIEVTVKHLEAHSTDKPPPATAADELRRFVTQLSQLAPFSNSFKLLIWKLSYR LWNACVDISNTATIRSSPSTTEAAAVTHAKLRHITADLLSIAGEVSGVPSPAIKAASFYYKTGLIWHNLRRFDLAAKCFE RATDLVSKLDVASISDAGERKLLLDLNLARSQTAWEVRDPNLAVALLNRSKGLLFGCSEHHKELAKQFMAFGKSSLSSNR DLGEALKLMNEALEGCEKGLGVARTREEKVEIRGLRWKVLRFIAAIHLQKEEYESVVKCVKVLRDSADGGDDHPSLSVLA MKAWLGLGRHVEAEKELRGMVIDRGIPEGVWVSAVEAYFTAAGTAGAETAKGVFLGLLGRCHVSAGAAVRVANRVLGGSG GGEGGRVRAKVVAELVSDERVVALFAGEKAAKDRVAMHAILWNCGADSFQSKDYETSAELFEKSMLYIPYDTENRILRAK GFRVLCLCHLGLLQLDRAQEYINEAEKLEPNIVCAFLKFKIFLQKKDHQGAINQIEAMTACLDFQPEFLSLSAHEAVACH ALTVAVASLSSMLNFYASGKSMPTAEVTVLRTLVTVLSQEQGNEQQVLKFLKRAHTRASELGPDCFFGKEEVGKRERNWF AVTSWNFGRKTGQDKNYELSAEFLRLASNFHALVKESDTENNVMVCKSLVLSASSMIALEFERKTALSETEVKQAAHLLD RAGQMLKSISSGNSANDDQINSMEPDLFFMYTFCAFDIQGRLNNSGSQLLIVKSFASSKFCKPQHLLQIGLSASQGPRSN HEVATFALNECLSSFLSSPVPDYQNIALVVRKLIAIASIHKGDNNDDVVHSMYKQAKGIMVGLKEGEYPIEEGKWLSMTA WNRAAVPVRLGQLEMGKKWMTVGLDIANHVPGMETYKACMEDLLRNLEKKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 903 | 903 | 0.0 | – | |
| PANTHER | 1 | 903 | 903 | 0.0 | – | |
| Gene3D | 119 | 342 | 224 | 1.5E-6 | ||
| SUPERFAMILY | 134 | 513 | 380 | 1.26E-11 | ||
| SMART | 136 | 169 | 34 | 0.39 | ||
| Pfam | 193 | 465 | 273 | 6.3E-47 | ||
| Gene3D | 417 | 625 | 209 | 8.0E-8 | ||
| SMART | 438 | 471 | 34 | 350.0 | ||
| SMART | 479 | 512 | 34 | 93.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Meiotic cell cycle | Progression through the phases of the meiotic cell cycle, in which canonically a cell replicates to produce four offspring with half the chromosomal content of the progenitor cell via two nuclear divisions. |
Expression pattern of LotjaGi1g1v0490200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…