Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0491500.2

Overview

Field Value
Gene ID LotjaGi1g1v0491500
Transcript ID LotjaGi1g1v0491500.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT4G38520.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q5PNS9|P2C64_ARATH Probable protein phosphatase 2C 64; TrEMBL-Plants: tr|A9PEM6|A9PEM6_POPTR Phosphatase 2C family protein; Found in the gene: LotjaGi1g1v0491500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:100493885..100500961) extracted from Lotus japonicus Gifu genome v1.2.

ATGTTACCAGAGTTGATGAACTTTCTGACGGCGTGCTTTCAACCGCGTTTGGATCGATATGCACGCAGTGGTTCAGATGC TGGAGGTAAACAAGATGGGCTCTTGTGGTACAAGGACTCGGGGAAGCACTTGAATGGCGAGTTTTCAATGGCTGTGGTCC AAGCCAACAACTTGCTGGAGGATCAGAGCTATCTTGAATCAGGTAGCTTGAGCACCAGTGATTCTGGGCCTTATGGCACT TTTGTTGGTGTCTATGATGGGCATGGAGGGCCTGAGACATCGCGTTATATCAATGAACACCTAGTTCGCCATCTCAAGAG TAAGTGACATCAAGACGAGTGAATTGAATTCAATTTTTTTTTGCTTTCTTGGGATAGATTGTACTTGTTAATTTGTTGTA TTTCTCTCTACCTCGAGTACCTTCCAATTCTAAGAATATGTGGTTAAAATTTGTTTTTGACTCTGACCAAAAACATAAAG GGAACTATGGAGTGTTGGAAAAATTTGCTAGCTTTTGTGCATCTGGTAAATACCAGAAGGAGCTGTTTAATCTTGGGGAG TGTTCGGAAATAAGCAGAGCTAGGATTGTACCCCGTGTGATGCACGACAAAACGGTTCTACTTGTTTAAATTGTTATTTT GACCACTATATGAAGAGTTTAATGATTATGCACTATCGTTGTAAAACATTTTTACACTGATAACTGAATGTCACGTATTC AAAAACAATTGCTTTCTTTTTTATTTTGATGAAATTAAAAACTTATATTCTGATTTGGGGACCCATTATTAGATGTCTGT GTAAAAAATGTTTACACTCACAGTCAATTACCATTAAATCCCTACATAACTGTGTGTTAATCAATTTAATACACACACAC ACACATATATAAATATTACATTTAACATCCATATATAAGCTTGTTTTAGTGTTTTAGTGTTAAACATACTTGGATTCAAA CTGGATACATGGAGGCCCACAATCTAATCTAATTTCAATAAACTGGGCCAATGTTAGTTGTGCCAAACAAAAAAAAAAGA GGCATTCTGAAATGAACAGTGAAAACAGTAAACTTTGAAACTGGCAAATTATATGTAGGAGATAAAACTCTTTGAGAACA GCTTGTGAATTAATCTATTTCTTGTTGTTTGCCTGTTTATCAAAGAGACGAGATTTTTGACTTGTGAACCGAAATATATG TCAATAAGGGATTTTTCCCCATTCTTTCTTTTGTTTCTGTTCCTAGCTGAATAAATTGTTAGAGCCATCACAAGTGACTT GGTAAAGTTTGTTTCTTTCGTGTCAAGATATGTGGCAAAGGGATGGTTTATATTCGTTTTACATTTTTTCCCTCAATCAT CATATCAATTATGCATCAATCATAGAGTAAAAAGTTAAAGATATATCATATATGCTGAGTTGAAACTACATAAATTGTGA TTTCACTTTTCAATACCTCGTTTGTTGCATGTATGTCAGTCAAATTTAGCCGTCTTTTGAATTGTTGTTCTATGCATGAT TGTCAATTAAAAGTGTTCATGCTCAGGGTTTGCTGCAGAACAACAGTCAATGTCGGTGGATGTAATTCGGAAGGCAATCC AAGCAACAGAAGATGGATTTATGTCACTTGTTGCCAAACAGTGGTCAATGAAACCACAAATTGCAGCTGTTGGATCATGC TGTCTTATTGGCGTGATTTGTAATGGAACACTGTACATCGCAAATCTTGGCGATTCCCGGGCTGTTCTGGGAAGAGCGGT CAAGGCAACTGGGGAGGTTTTAGCGATGCAATTGTCAGCAGAGCATAATGCAGCAATAGAGTCTGTAAGACATGAGCTGC AATCTTTGCATCCTGATGATTCAAACATTGTTGTTTTGAAGCATAATGTATGGCGCGTGAAGGGCCTAATACAAGTAAGT CAGATATAGTTCTATAATTAAGAAATCAGTTGTAATTCTGCCAGAAATTGTTTGTCTAACTGCTCCAAACTCATGTGGAC ACTTTATCCTTTAACTCTAATAACATCGCATCCTCATAGCGTCTTAAAATTTTAAATTTCAGTGTTGGATCATGGATGTA TATAGTTCAGTTTTAAGAATGTAATATTATGTTTATCTTTAAGAAAAAGAATGTAACATTCAGATGTAAGAATGACTTAA TACTATAGTTAATACTTAATAGTTAATAGTATAGGTACAATGCTCATGTAAAAAGGGTAGGGAATGGAGTGCACTAGTGC AGGCTGACTGGGTGAGGGAGGAGCATGAGAGAGTTAGAGGACAGAAAAAACCTTGGGGTCAAGTTTATTTGTAGAAGGTC CTGATTATATCTCTAAACTTCATTGCAATTTTTTATGCAATATATTTTAATTGCATTAATGTTATAGTTAATTAATGATG TCTTATGCCTTCATATTACCAGAAAACTTCATTTGCTTAGAATAGTGAAGAACCATGACATAATTTGTGCTTAATTTATT TTGTATCTCTAGATGCTGTGTTAAATGTTGTGAAGTTTTTCTTACAATTTAATTTAAAACTTCCGAACTCCCGAAGTTAT AAATGTAGAAAGATTCAAATTCCCTCAATTTCACGTAATTCTGTGCTAACAACTTCTTTTGCTTGTAATTTAATTTGATA AAACTTCAATTTAATGCAGTTGAATGGTCATATTTAGTTGTCCATTATATGCAGTCAAAGCTTGCAAATATTGCTTTTTT ATCTATTCCTTTCATGAAACTTGGACCTTAAGATTATGACATCGAGTTCTTTTGTTGATCCTTACTCATAATCCTTCTCT TTAGCTTTATAAACATTGCAACTTTTTTTTTTTGAATGTCAGAACTTCTTAAATCTCTTCATACCTCTCTGTCTATCTAC AGTCTACTCTACCCACTTATCCATGTTAGAGCATTTGAACTTTTACAGAATGAAAAATCAGCTTTAGTTGTCATGTTGTG TCTTGTCAGCACCAACATATCCTTACTAGGAGCATCCCCCTTTTTTTGTTGCATGAATTAACATCTAAAACCTTTTGGTG TTTCAGATCTCTAGATCTATTGGTGATGTATATCTTAAAAAGGCCGAGTTCAATAGAGAACCACTATATGCTAAGTTTAG ACTTCGTGAGCCGATCAAGAGGCCGATATTGAGCTCAGAACCAGCAATATCAGTGCACCAGTTGCAGCCACATGATCAGT TTATTATATTTGCATCTGATGGATTGTGGGAGCACTTTACCAATCAAGATGCTGTTGATATAGTTCAAAATCATCCCCAC AATGTAAGATATATATATTTTCATACACCTTACTAGATGCTTTATATGCTGGTGAAATTGACATACTGTTGAATGCGATC ATGGTTTATTGCATCTATGTGTCACAGATGTGCTTATTCAGAAATTGTTTTCTTCCTTTCTTTTTTGGGGTTGTATTAGG GCTGGAAACCCCTAACAGCCAAACAGGGACGTAGATGTCATTTTCTGAATTAAAATAACTATTATTAAATCTGGAGTGGT ATTAGTACAAATCCCTTCCTGGCTGTTGTGTTATTAGAATCTTAGCCTTCCCTTGACTTAGATAACTCCTGCACAATAAA TAATCTGTTCTTAAATTGGAGAACTATTTGCTGATGTTAAACTTTTAATGCAATTGACCTAAAGCTATGCAACAACTATT AGATAACATTAATGCTTAAGTGTATATTTCGGAACGTTACCTTAAAGTAGATTCATGTTTTATAAATGAACCTGTTGAAT ATCTATTAAGATTTAGTTTATAATTAGTCTTGTCTCATTGAGATATAGTTTAGATTTGTTTCTCTATCTTAGATTAGTAT ATCTTAGATTAGTATCTATTTAAATAGAGATGATATCTATTTAAATAGAGATAGGTTTAGATAGATTTAATTTCTTTTTA TCTCTTTGTTAGTCTATATATATTGTAGTTTTCAGTCAAGTATTAATCAATGAAATACAAGTATTATTTTATCAAATTCA AGTTGGTATCAGAGCAAGTTTCGATCCTACCGCTGTGAGGGGGCTCCTCCCCATGAGCCCCCTCATGGTGACTTTCCAAA TCTCTTTGGATTTAATTTTCCTTGTACTTCGCTTCCGCGCTTGTTAGTTCTAGCCGTTTTCTTACGGCTTTGTTTCTTTC TGATCATGGTTCCCTTTCTCTTGGAACCCTAGTGATCCTTGTCACGTTCTTGACAGTCATTATTGACGTTCAACACTGTC AACACTGTCAACGTCTTTCCACCGCCGTTTTCCGAAGTTGCTCAGAACGGATCAGAGAATCCTCCATCTTTTCCGCCGCC TGTATCTTGAACAAGGTTGGTCCTTGAGCGGGCGATACTCATTGGTTAGTGAACAAGTAATGGAATACGAATTGTTAGTA TGGCGTGGTCAATGGCTGGTATTATTTTAATGGAAGCAAGCTGCAGAGTTTGATTAAAGTCTCCCGTGGTGCAGCACCTT TGAATGCAGCGGTTATTTATTACTTTGTCCAAACTTTCCCTAATGTTGATTTCATACAAGATACGTGAATAATGAGGAAG CCACAATTTCAACAATAGATAAAGATGGTTATTGGAGATGTTGTTTATTTCGATCAGGATGAGTATATACATATATCTGA TCGCTATCTGATCGCTTGAAAGGTATTATCAAATACAAAGGCTTTCAGATTGCTCCTGCTGATTTAGAAGTTGTGTTAAT TTTGCATCCTGAAGTAGTTGATGTTGCTGTTACAACTACCATGGATGAAGAAACTAAAGAGATACAAGGTGGCTCTTTGG TCCAGTCAAATTCTCAAATAGTGTGTTGGGTTACTCCGGTAATATTTCTTCTGTTGAATGGATGTATGCATCTGATGTGC ACTGCAACTCTTTCTTAGAGTCTAATATTGAGGCTACTATTGTTTGAAAGGGCAAAGTCTTTACCTACTCGTTGGGAGTA GGCGGTGAAGGGAAATTTCAAGTCTCTACAATTTCTGATTACCACATTGCATTGTGTGCTCCGTTTGTGTGTGAATTTCT CTCTCCGGCAGCAACGATTTCTCGAGTTAATTATATTTGTTACAAGCTATGCATATGATATATATGCTCTAGCTTGAGGG TAAGTGTTGTGTGAATTTCTCTCTCCGGCAGCAGCGGCTTCTCGAGTTAATAATATTTGTTACAAGCTATGCATATGATA TATATGATCTAGCTTGAGGGGGGAAAGTGTTAGATATTGTTAAATATCTTAGAGACTACAGTCAGCCACCGCCGCCGGAT TCCAAGCCATGCGCCTCCCATCTCTCTGCGTGTGAAGTCCACGCGCCTCTATCTCCGCTGCTTTGTTCTCGCTGGTTCTC TTTGTGTATCAGCCAGGTTGCGCCGCTCTCTCCGCTGCTTTGTTCTCGCTGGTCCTCTTTGTGTATCAGCCAGGTTTGGT TTTAAGGATCCTCTGTTTTGACGTGTGTTGTGCCATCTCTCATTGTTGGCCAAGTTTGGTTTGGTTTGGTTTGGTTTGGT TTGGTTTGGTTTGGTTTGGTTTGGTTTAGTTTGGTTTGGTTTGGTTTAGAGTTTTAACTCTGTTTTGACGCTCAGATCCG CATTGGTTTTTGAGACTTGAGTTGTTGTTTGCGTCTCATTGTTCGAGATGCTCTTATTATATTGATCTTGGCTGATTTTA TGCAATTTGGTTTTAAAGGTGACAATGTCACCTTCGTTTGTTTTGTCTCGATTGTTTGGTTTTCTAGTTGTTTGGTTTTC TGGTTTTAGGGCTTCAGCTGCGGGTTGCGCTGGCCCACTCTCTAATGTTTGAGAGTTGTCTGTGTCAAAGTTGACACCAT TGTTTGTCTTAGAAGCCATCAATCGATCGACCTCAAGTGTGTTTTATTTCTGTGTGGTTGTTGTTGGGGAGTTGTTGCTT CAGCCTTTGTTTTCTGGCGTATTGTTGCTGGTTTTTCGCCCTTATTTGCTGGCTCAGCTACCCTACGACACTTCAGAAGA ATTGGTTTTTGTCTTGCATCAATTTCAGCCAGATCAAGTATGAGAAGTTATCTCTTGCCTGCCCGTGAATTTTGCAGAAG TTCGAAAGATTATTCAATTTGAAGTATGAGAAGTTGTCTTTTGCCGCCATGGATTTACTAGAAGTTTAAAAAGTTATTCA ATTCAGAGATTCGCCAAGACCGTCATTGTTAAGGGATATCTATTAAGATAATTTTCTTTTTGGGTTTGATTTGTTACAAG CTTAAAGCTAAGTAAGCTTTAGCTTGAGGGGGAGTGTTGAATATCTATTAAGATTTAGTTTATAATTAGTCTTGTCTCAT TGAGATATAGTTTAGATTTGTTTCTCTATCTTAGATTAGTATATCTTAGATTAGTATCTATTTAAAGAGAGATGATATCT ATTTAAATAGAGATAGGTTTAGATAGATTTAATTTCTTTTTATCTCTTTGTTAGTCTATATATATTGTAGTTTTCAGTCA AGTATTAATCAATGAAATACAAGTATTATTTTATCAAATTCAAGTGAACCCAAAATGCTGGATTCATGTTTTTGTCCTTT TTCCTCATTGGAAACCATGAGCTCACATTCCCAAACATGAAACGGAGTGAAGCGTGGGGCGGAATGGCAATCCAAACGTG TCATAATTTGCTTTATGATGTGCTGTCTAAAATATTTATCCAGATTTATGCATGACTTGGGAGCAACTTAAAGCTATCTC TTTGGGATTAGATAAGTTCCTTAATCATTGCAGACAACACTCACGATAAAGAATGAATATATGGTTTATCTTGTGTCTTT TTCTCAGGGAATTGCAAAGAGGCTGGTGAAAATGGCCCTTCAGGAAGCAGCAAAGAAGAGAGAAATGAGATATTCTGACC TGAAAAAAATTGACCGCGGGGTTCGTCGGCATTTCCACGATGATATCACAGTGATTGTTGTGTTTCTTGACTCCAATCTT GTGAGCAGGGCAAGCTCTGGCAAGTTTACCAATATCTCTGTTAGAGGGGCTGGCATCAACCTGCCCCCTAACATACTGGC ACCTTGTACTACACCAACAGAGGCTGGTTCTACCTAA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0491500.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTACCAGAGTTGATGAACTTTCTGACGGCGTGCTTTCAACCGCGTTTGGATCGATATGCACGCAGTGGTTCAGATGC TGGAGGTAAACAAGATGGGCTCTTGTGGTACAAGGACTCGGGGAAGCACTTGAATGGCGAGTTTTCAATGGCTGTGGTCC AAGCCAACAACTTGCTGGAGGATCAGAGCTATCTTGAATCAGGTAGCTTGAGCACCAGTGATTCTGGGCCTTATGGCACT TTTGTTGGTGTCTATGATGGGCATGGAGGGCCTGAGACATCGCGTTATATCAATGAACACCTAGTTCGCCATCTCAAGAG GTTTGCTGCAGAACAACAGTCAATGTCGGTGGATGTAATTCGGAAGGCAATCCAAGCAACAGAAGATGGATTTATGTCAC TTGTTGCCAAACAGTGGTCAATGAAACCACAAATTGCAGCTGTTGGATCATGCTGTCTTATTGGCGTGATTTGTAATGGA ACACTGTACATCGCAAATCTTGGCGATTCCCGGGCTGTTCTGGGAAGAGCGGTCAAGGCAACTGGGGAGGTTTTAGCGAT GCAATTGTCAGCAGAGCATAATGCAGCAATAGAGTCTGTAAGACATGAGCTGCAATCTTTGCATCCTGATGATTCAAACA TTGTTGTTTTGAAGCATAATGTATGGCGCGTGAAGGGCCTAATACAAATCTCTAGATCTATTGGTGATGTATATCTTAAA AAGGCCGAGTTCAATAGAGAACCACTATATGCTAAGTTTAGACTTCGTGAGCCGATCAAGAGGCCGATATTGAGCTCAGA ACCAGCAATATCAGTGCACCAGTTGCAGCCACATGATCAGTTTATTATATTTGCATCTGATGGATTGTGGGAGCACTTTA CCAATCAAGATGCTGTGACAATGGGAATTGCAAAGAGGCTGGTGAAAATGGCCCTTCAGGAAGCAGCAAAGAAGAGAGAA ATGAGATATTCTGACCTGAAAAAAATTGACCGCGGGGTTCGTCGGCATTTCCACGATGATATCACAGTGATTGTTGTGTT TCTTGACTCCAATCTTGTGAGCAGGGCAAGCTCTGGCAAGTTTACCAATATCTCTGTTAGAGGGGCTGGCATCAACCTGC CCCCTAACATACTGGCACCTTGTACTACACCAACAGAGGCTGGTTCTACCTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0491500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLPELMNFLTACFQPRLDRYARSGSDAGGKQDGLLWYKDSGKHLNGEFSMAVVQANNLLEDQSYLESGSLSTSDSGPYGT FVGVYDGHGGPETSRYINEHLVRHLKRFAAEQQSMSVDVIRKAIQATEDGFMSLVAKQWSMKPQIAAVGSCCLIGVICNG TLYIANLGDSRAVLGRAVKATGEVLAMQLSAEHNAAIESVRHELQSLHPDDSNIVVLKHNVWRVKGLIQISRSIGDVYLK KAEFNREPLYAKFRLREPIKRPILSSEPAISVHQLQPHDQFIIFASDGLWEHFTNQDAVTMGIAKRLVKMALQEAAKKRE MRYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSGKFTNISVRGAGINLPPNILAPCTTPTEAGST
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13832:SF685
17 376 360 1.6E-177 –
PANTHER
PTHR13832
17 376 360 1.6E-177
IPR015655
Gene3D
G3DSA:3.60.40.10
36 358 323 9.0E-76
IPR036457
SMART
SM00332
39 346 308 2.5E-73
IPR001932
CDD
cd00143
48 348 301 3.33043E-64
IPR001932
SUPERFAMILY
SSF81606
56 349 294 4.05E-52
IPR036457
ProSiteProfiles
PS51746
66 348 283 38.973
IPR001932
Pfam
PF00481
78 318 241 4.9E-38
IPR001932
ProSitePatterns
PS01032
81 89 9 -
IPR000222

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0043169
Molecular function Cation binding Interacting selectively and non-covalently with cations, charged atoms or groups of atoms with a net positive charge.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0491500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…