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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0497000 |
| Transcript ID | LotjaGi1g1v0497000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cationic amino acid transporter; TAIR: AT1G05940.1 cationic amino acid transporter 9; Swiss-Prot: sp|Q9C5D6|CAAT9_ARATH Cationic amino acid transporter 9, chloroplastic; TrEMBL-Plants: tr|I1L617|I1L617_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0497000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101241280..101246842) extracted from Lotus japonicus Gifu genome v1.2.
GGTTAGATACATCCACAATAAGGGAAACAAATAATTAATAAATTATTTACCAATAAAAAATACATCTCAAAATTATTTCC CTTTCAATTCTATTTGATTGGGTGATCCTCCTCCAATCTTCTTCATCCATGGAGGTAGGAGGAGGAGAGACTGCACCCAG ACAAACAAACCCAACAAATTCCTAGTCATTTCACTTTCTTCCATTTTTCACCTCAATTTCTTCTTCTTCTTCTTCATCAT GGGATTGAGTGGTGTTGCTTCACCTTCTTCCTCATCATCATCTTATTGCTCCCGTTTCTGGTCATCAGCGCTCCGATCCA AACCCCTCGTATCGCCGGCGGAGAAGGCCGCTCGCGACAGCTCCGGCAGGGGTCTCTCCCGCCGCCTCGGTGTCTTCGAC CTCCTTCTCCTCGGGATCGGCGCCTCCATTGGCGCTGGCATATTTGTCGTCACCGGCACTGTAGCTCGCGACGCCGGTCC CGGTACGCCTCGCATTCAATTGAAATGGGTTGTTCAAATTTTCTGTTAAGAGGAGTGCTTTTAGATTGTCCTGCATCAGA CATGACTGTTTTAGTTTGTATTAGTCATTGCATACCCACAACATACTAGTACCATTTATTTTGATGGCAAATGAGCAACA AGCTTGTTGATAAACATGTGAAATGCAACTCTTAATTTGCAACTTTGAGAGGTTTATTTATTTTGATAGGGATAATGGGG TGGTTGTTAATGATAAATGCTGATTTGTTTCCTTTGTTGTGCTTTAGTTTATGGAATGAAAAGGAGCTGGTCGAAATTTC GATTCAGAGTTCTGTAATTTTATAGGGCGATATTGGAGGGCATGAACAGTTCATTTTCTTCGTTCTCTAATCTTTGCTAA ACACGATTGCAGTAAAAGTGAATACTGAATTTGTCTTAATTCCTCTTCACTTGCTCTCCTTATCTTATTTATTTTCATAT CCACAATGGGTTAGTGTCTGTTTCTGCGGATATGTATGTCTATGATAACATGGATTTTCTATGTTAGACTTAGACTTCTT CTCCATGAAAACTTTTATCCATCTCAAATGACTGCATCTTCTTCAGAAGGGAGTACGACAGGGTATAAAATACTCTTTAA TCACATCTTGAGCAGTTTCAAAATTTGGTGGTTTCTTCAGTTTGCTTACATTTTAACTTCCCTCCTCTATACTGAGCTCA ATTGTAATGCTAATTGATGTGCTGAGACAGGATTATTCGTACTTCTTATGTTGAAACAAAAACCTTCAATATGTGTCTAT TTATCAATATAGCTGCTTTAAAATATTGGTCAGGACAAGACATGTAATGGTTATTTTTCTGTTACAACTCCAAACTTAGT GCTTATACATGGTTACTTTTTGCAATGCAGGAGTAACAGTTAGTTTTATACTTGCGGGAGCATCCTGTGTTATAAATGCA CTCTGTTATGCTGAGCTAGCTTCTCGGTTTCCTGCCGTTGTTGGAGGGGCATATCTATATGCATATACTGCTTTCAATGA ACTTACAGCTTTTCTTGTTTTTGCACAATTAATGCTTGACTATCATATTGGAGCAGCTAGCATAGCAAGAAGCTTAGCAA ATTATTTGGTAACAATTCTAGAGCTCTTCCCCATTTTCAAAGATAACATTCCGAAATGGATTGGACATGGTCAAGACATT GGAGGTGTGCTATCCATCAATGTCTTAGCTCCAATTCTCCTACTTCTTCTCACTTTTGTTCTCTGTCGGGGTGTTCAAGA ATCATCAGTTGTGAATTCGTTTATGACAGTGACCAAGGTTACTTTCTATCTTACCAATATATTATTAAGCATTGGATGAA AGCTGGGGTTTACGTGAGACCAGAATCACAAGTTATTTTACTGTTTGTTGTAGGTGGTCATCGTTATTATTGTCATTTTT GCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTATGAAAAGCATATTTACTGGAGCTAC TGTAGTCTTCTTTGCATATGTTGGATTTGATGCAGTTGCAAATTCTGCTGAAGAATCTAAGAGGCCACAGGTATGTTATG TATTGTGAGATTGCTCTGATAGTTGATGGATTTTCCTGATGGCTTATATGTTATTTAATGTTTCTGTTGGGAACAATAAT GATGCTAGAAGTAAATGGTGACTATTTAGAGTTTTATGTCTGCTGCTAGATGCCGTAGTCTATTGGTCACACTTTGCCTT CAATAATCTTACAAGTAAATAGTAACTATTCGGATTTAGTTTTCCCCTTACCGGGATACTGTAGTTATTAATTAACTTCA GGTCATTTTGTAAATGTACTTGTACATCAGAATAGCAGTTTAGCAGAAGCTATCTGGCAATGATATTTTTATTTGCTGTG TCTAGTAAACTCATGGTTTCCATTCTAACGTTTTCTCCTCTTTTTGTTGTTATGAGTTAGTTGATGATATTTTTCTTTTA ATGTTTCTAATTTCTAACATTTCAGCGTGATTTGCCGATAGGCATAATCGGAAGCCTCTTGGTGTGTATTGCTTTGTACA TTGGAGTGTGCTTAGTGATTACTGGAATGGTTCCATACAATCTCCTAGGAGAAGATGCTCCGTTGGCTGAAGCTTTTAAA TCTAAGGGGTTAAAATTTGTTTCTATTCTGATTAGCATTGGTGCTGTTGCTGGACTTACGACAACACTCCTTGTTGGTCT CTATGTTCAGGTGAATCACTTGTGAATTAAGATGTAATTGATTGATGTGCCTTGTGTGTGCTAATAATGTACACAATGAC ATGTTTCTGATGAGCAGTCTCGGCTATATCTTGGGCTTGGTAGGGATGGTTTACTACCCGCAATATTTGCTAAAGTTCAC CCCAAACGCCACACCCCCATTCATTCTCAGGTTTGGGTTGGCTGTGTGGCCAGTGTTTTGGCTGGACTGTTGAATGTGCA CATGCTCTCACACATTCTGTCTGTTGGTACACTGGTAAGATTCGATATCTAATTTCTTGATGCTGAGTTTGTCAACAAAA CATATGTATCTATATAATCTTGAATTATATGTGTGTACGCGACATAGAAAACGTGATGCCTGTCTAGCTCAGTGGGCATG CCTCTTTATATTGGCTACATTAATATAATATTACTATGCTGTTGGATCAAGATCCTCTCAGGCAAAACTTCACATGGCAC AGTCATGCTGTAATTTTATGCCTATCTTTCTTTTCATATGTATTAAATAGTTGGGACCCTTTGAATAATTTATGAAGAAA GAGATAGGCACAAAGTTTCACATGACACGGTTATGTGACATGAGAGGATGCCAATCCCTGTGTTTTTTAACATATGTTCA GACAATGCATCATATTTTCCATTTAGGGAATAATACAACATGCTGTGCCTTGACATTTCACAAAGTATACTTCACAGGTG TTATTGATTAGTGTTTGTAAATATTTTTAGTTAATGCCCCTCACTTAATATTTGCACTTATTTTAGACTGGCTATTCAGT TGTCTCGGCATGTGTTGTTGTACTTCGCTGGAAGGATAAAACAACTGGTCAAGTATCACCTTCAGCCAAGAGGGAAGGTG TAATTTGCCTCATTGCTGTTGCAGTTTCTGGATTTATTGGGGGGGTCTCTTTCCGCTATGATGCCTCACCTATTTTACTG ATTCTGGCTATACTTGTTGGAGCTGGTGCTTCTGCTGCTCTTCATTTCCGCCAGGTGAGTGTTCTTTTGTATTTTATTAA CTGTTTGTTGCATGGACTTCTTCAAAATGGTTTGGTTAAAAAATAATTAATTTGATGTAACATGGTGGCATAGAAAACAA ATAAAAAACACTAAGGGATATTCAGTTATAAGTTAATTTTGCTTAAGTACAGGAGGGAAAGTAAAAACCTTCTTTGATTG AATAACTAATCAAAGGTAAAATTAATATTGATTTGATTCGATTTAATATGCAACTTCAGCATGCATATCACAACATGGCA AAGACACGTGGCTTGTTGAGAGGGGGAATACGACATGATTTCATGAGAAGAAGATCAAGTACTGAGGTTGTCTCATACAC TCCACAATGGTGACTCAAATTTATTATAAATAGGGGTGGATAACAAGCACAATATGGGTTGAAAACCAATCTCAATGCCA ACATGGGGTGTAACCAGGTTTGGGCCAACTCGCGAACCTGATCAACCGACTTGATCCATGTAAAAATATTGCTCGTTTCG GTAGGGCAGGAAGGAAAAGAATCTTGATCCAACTGTAGTCAGGTTTTGGGTCAAGAAAATTGAGTTGAGACCTCGATCAA TCCGACCCGACTCAATATTGCATTATTTTATATATCTTTTTAAAAAAATTCATTTTATATATTCGAAAATCAAAATTGAT CTTTAATTGTTTTGCATATATTTCTCTCAAATCTGACCTGACCTGATTACACCTCTATGGCCAACCAACAGTTTTGCTAA GCTTTCCGGACCTCATAACTTGAAATTTTGTAAAATTCATGTATGTTGCATAGATCTTATTTCCTCTCATTAATTCCTTT CTGTTATATCATTTGGATTTCTAGGATTATGCAGCAGATTCACCAGGGTTTTCTTGCCCTGGGGTTCCCATTGTGCCAAA TGTTTGCATCTTTTTCAACATGTTCTTATTTGCCCAGGTATGCCCATGCTACTTTTGACAAATTAGCCAGAATAGTACTA TATCTTTTTTTTTTGGTTACAGGAGGAAGAGTGAATAGTACTATATCTGAAAAGACTAAAGTTAATAATTTTAATATTTA TTCATCAAAACTGACATGATGATGAACTTCTGTTGACAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTTAGTGT TGTCATGGTTGGTCTTTATGCAATATATGGGCAGTATCATGCTGACCCCAGTGCAGAGGAGAATACTGTTTATCATGAGG CACCAGAGGAAGATGGTCGATGAGTTATCAGTTCAATATTAAACATTACGGTTTACATTATGGCCAATGGGGAGAAGGGT GTGTTGGTTAAAATGTATGTAGCAAATATAAGGTGAATGTGAATGGGGTGAAGATGGTCGATTTGTTAGGAATGTGAATG TCCATCAGGTGTAGTTAGATTGTATACGGCACACTCAGCAAGTATAATACGTTCCATTTGGGGTTTAAATTCCTGTTGCG GTTGTATCGTGGATAAATGTGGCTACAATTGCAGTAGAGATACCATTGCAGGGACTCAAAAACCCTAGTACATTGTGGTC GCAATTGTGGGGGTTGTAAACTTAAATTTGAAGCCTTGCTTCCCCTCAAAGGGCTCCTCCTCCTTTGATCCCCAACATAT GTATGATGTATCTCTTGTAGTTTACAACTTAATTCGAAAAGAAAATAATCATGTACCATTTTCTTATGTGAATATTCAGT TGATATTTTTTGACTTGTTCAAGCCCAACATTTGTCTGCATTTTTCTTTAATAAAAAAGAAGCTCTATTAAAACTTTATC TATAATACTTTACTTTAATATCAAGGATTAAATCATGCTTATA
CDS sequence (LotjaGi1g1v0497000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTGAGTGGTGTTGCTTCACCTTCTTCCTCATCATCATCTTATTGCTCCCGTTTCTGGTCATCAGCGCTCCGATC CAAACCCCTCGTATCGCCGGCGGAGAAGGCCGCTCGCGACAGCTCCGGCAGGGGTCTCTCCCGCCGCCTCGGTGTCTTCG ACCTCCTTCTCCTCGGGATCGGCGCCTCCATTGGCGCTGGCATATTTGTCGTCACCGGCACTGTAGCTCGCGACGCCGGT CCCGGAGTAACAGTTAGTTTTATACTTGCGGGAGCATCCTGTGTTATAAATGCACTCTGTTATGCTGAGCTAGCTTCTCG GTTTCCTGCCGTTGTTGGAGGGGCATATCTATATGCATATACTGCTTTCAATGAACTTACAGCTTTTCTTGTTTTTGCAC AATTAATGCTTGACTATCATATTGGAGCAGCTAGCATAGCAAGAAGCTTAGCAAATTATTTGGTAACAATTCTAGAGCTC TTCCCCATTTTCAAAGATAACATTCCGAAATGGATTGGACATGGTCAAGACATTGGAGGTGTGCTATCCATCAATGTCTT AGCTCCAATTCTCCTACTTCTTCTCACTTTTGTTCTCTGTCGGGGTGTTCAAGAATCATCAGTTGTGAATTCGTTTATGA CAGTGACCAAGGTGGTCATCGTTATTATTGTCATTTTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCCTTT GCTCCAAATGGTATGAAAAGCATATTTACTGGAGCTACTGTAGTCTTCTTTGCATATGTTGGATTTGATGCAGTTGCAAA TTCTGCTGAAGAATCTAAGAGGCCACAGCGTGATTTGCCGATAGGCATAATCGGAAGCCTCTTGGTGTGTATTGCTTTGT ACATTGGAGTGTGCTTAGTGATTACTGGAATGGTTCCATACAATCTCCTAGGAGAAGATGCTCCGTTGGCTGAAGCTTTT AAATCTAAGGGGTTAAAATTTGTTTCTATTCTGATTAGCATTGGTGCTGTTGCTGGACTTACGACAACACTCCTTGTTGG TCTCTATGTTCAGTCTCGGCTATATCTTGGGCTTGGTAGGGATGGTTTACTACCCGCAATATTTGCTAAAGTTCACCCCA AACGCCACACCCCCATTCATTCTCAGGTTTGGGTTGGCTGTGTGGCCAGTGTTTTGGCTGGACTGTTGAATGTGCACATG CTCTCACACATTCTGTCTGTTGGTACACTGACTGGCTATTCAGTTGTCTCGGCATGTGTTGTTGTACTTCGCTGGAAGGA TAAAACAACTGGTCAAGTATCACCTTCAGCCAAGAGGGAAGGTGTAATTTGCCTCATTGCTGTTGCAGTTTCTGGATTTA TTGGGGGGGTCTCTTTCCGCTATGATGCCTCACCTATTTTACTGATTCTGGCTATACTTGTTGGAGCTGGTGCTTCTGCT GCTCTTCATTTCCGCCAGGATTATGCAGCAGATTCACCAGGGTTTTCTTGCCCTGGGGTTCCCATTGTGCCAAATGTTTG CATCTTTTTCAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTTAGTGTTGTCATGG TTGGTCTTTATGCAATATATGGGCAGTATCATGCTGACCCCAGTGCAGAGGAGAATACTGTTTATCATGAGGCACCAGAG GAAGATGGTCGATGA
Protein sequence (LotjaGi1g1v0497000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLSGVASPSSSSSSYCSRFWSSALRSKPLVSPAEKAARDSSGRGLSRRLGVFDLLLLGIGASIGAGIFVVTGTVARDAG PGVTVSFILAGASCVINALCYAELASRFPAVVGGAYLYAYTAFNELTAFLVFAQLMLDYHIGAASIARSLANYLVTILEL FPIFKDNIPKWIGHGQDIGGVLSINVLAPILLLLLTFVLCRGVQESSVVNSFMTVTKVVIVIIVIFAGAFEVDVSNWSPF APNGMKSIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYNLLGEDAPLAEAF KSKGLKFVSILISIGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPAIFAKVHPKRHTPIHSQVWVGCVASVLAGLLNVHM LSHILSVGTLTGYSVVSACVVVLRWKDKTTGQVSPSAKREGVICLIAVAVSGFIGGVSFRYDASPILLILAILVGAGASA ALHFRQDYAADSPGFSCPGVPIVPNVCIFFNMFLFAQLHHEAWVRFVILSVVMVGLYAIYGQYHADPSAEENTVYHEAPE EDGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 49 | 49 | - | – | |
| PANTHER | 8 | 559 | 552 | 5.7E-296 | – | |
| PANTHER | 8 | 559 | 552 | 5.7E-296 | – | |
| Gene3D | 46 | 492 | 447 | 8.1E-111 | – | |
| Pfam | 50 | 459 | 410 | 3.1E-51 | ||
| TMHMM | 50 | 72 | 23 | - | – | |
| Phobius | 50 | 71 | 22 | - | – | |
| Phobius | 72 | 82 | 11 | - | – | |
| TMHMM | 79 | 101 | 23 | - | – | |
| Phobius | 83 | 104 | 22 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| Phobius | 116 | 137 | 22 | - | – | |
| Phobius | 138 | 177 | 40 | - | – | |
| TMHMM | 145 | 164 | 20 | - | – | |
| Phobius | 178 | 200 | 23 | - | – | |
| TMHMM | 179 | 201 | 23 | - | – | |
| Phobius | 201 | 206 | 6 | - | – | |
| Phobius | 207 | 228 | 22 | - | – | |
| TMHMM | 208 | 230 | 23 | - | – | |
| Phobius | 229 | 247 | 19 | - | – | |
| TMHMM | 240 | 262 | 23 | - | – | |
| Phobius | 248 | 269 | 22 | - | – | |
| Phobius | 270 | 280 | 11 | - | – | |
| Phobius | 281 | 307 | 27 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 308 | 326 | 19 | - | – | |
| Phobius | 327 | 350 | 24 | - | – | |
| TMHMM | 328 | 350 | 23 | - | – | |
| Phobius | 351 | 382 | 32 | - | – | |
| Phobius | 383 | 401 | 19 | - | – | |
| Phobius | 402 | 406 | 5 | - | – | |
| TMHMM | 403 | 425 | 23 | - | – | |
| Phobius | 407 | 425 | 19 | - | – | |
| Phobius | 426 | 440 | 15 | - | – | |
| TMHMM | 440 | 459 | 20 | - | – | |
| Phobius | 441 | 459 | 19 | - | – | |
| Phobius | 460 | 464 | 5 | - | – | |
| Phobius | 465 | 484 | 20 | - | – | |
| TMHMM | 466 | 484 | 19 | - | – | |
| Phobius | 485 | 495 | 11 | - | – | |
| TMHMM | 494 | 516 | 23 | - | – | |
| Pfam | 495 | 544 | 50 | 3.0E-15 | ||
| Phobius | 496 | 516 | 21 | - | – | |
| Phobius | 517 | 521 | 5 | - | – | |
| Phobius | 522 | 540 | 19 | - | – | |
| TMHMM | 523 | 545 | 23 | - | – | |
| Phobius | 541 | 564 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0497000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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