Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0504100 |
| Transcript ID | LotjaGi1g1v0504100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Defective in cullin neddylation protein; TAIR: AT3G28970.1 defective in cullin neddylation protein (DUF298); Swiss-Prot: sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2; TrEMBL-Plants: tr|I3SK46|I3SK46_LOTJA Defective in cullin neddylation protein; Found in the gene: LotjaGi1g1v0504100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:102172567..102181698) extracted from Lotus japonicus Gifu genome v1.2.
GCAAGATTGCATGATCTTAAGAAAAATCTATCCCTATTATTGATTTTCGTTTTTTTTCCAAACTCATTTGTTTATTTTTA TTATAAATAGTTAAATACAAAGAACACAATGAAGAAAAAAAATTGAAAAATTTGAAATTATCAAGCACTATATCATCTCT CTCTTTCATGTTCTGTGTATCTCTCTGATTCTGTCTCTCTCGGTTGTGCTTGCTCGAAGAGCTTCTGAGGGCAAGCTTCT CCATCCATGGATGCATCATCTCGGATCGACATCTTTGAGATTTATCGAAGATACTGTGGTAATCTCTTCTTCCACTTCCC CTTTTTTCAATGTGCAGCAATGACGAATCCGATTTTTGATCATGCAACAAGTTTTATTTTTGATCATGTTTTTGAAGATT TTACTCATTTGGGTCTCTGAAATTAATCTTTTTTTTGCTGGGTTTGATGGTATGGTTTAATTTGAGCACCATGGTGTGAT TCTTTCCATTTCAAGCAAATGAAGGGAACATGAAGAAGAAAGAAGACATTTTTAATTTTTAATTTGATTTTGATTTTGAT TGGTTAGTTATGCTTGTGGTGATTTGTTTATTTGTTTATTTTTTAATTTGAGTGTGTTTCTACAGACATAAGATCAGGAC ATGCATATGTTGTTGGGGAAGAAGGTTACAGGCAACACAGTGACTTTCACAAGGCTAAGGTCTCCAGGGAGGCACTGACT CAGCTCTCAAAATTGGTGGAGTCCAGAGTTAGTACAGGGTCTGTGTCTCTGAGATTTTCTTTAGATAATTTTGAAGCTGA ATGTTGCATTAACATGGTTTACTTTGATGTTTGTGTTTGTGCTTAATTTGAGTGAACAGTTTGATCAAGTGTTTATAGCA TGAAATTTTATTTCAAATGAGCTTATTCGTAAGAGTATTGAAATAAGCTCGATAGAGTTTATAGATAGGTTATTCGTTAT TTTTTTGAACTCAACTAAACATTTACTTAAGTCCTTGTCATAACATAGGTCTAAATATACTCCAAAGAAATTCTTATAAA CACCCCACCTCACGTAATTCGCTCCGCAATTGGCAGGAATAGATTGGACTTAGAATGATACTTCTTCAGTATCAGTTTTT GCTGAAACAGTTACAGAGTGAATGACGTCATGTTAATTAAATACACAATGAAAATTTTGTTGCTACCTTCCACTAAATCT GTAGTTTCTTTATAGTTCCCTTTTCTACCAATGTACGCACCCCATTTTAAAATAACAGGCTCATTTAGTTCTAGTATTTT GGAATTGCGGAAGAACAAGATGTGGAGTTAAGTTCCTTAGGACTTATTGGTTAATAAAACAAATCAGCAAACTGTGCTAG AATTATGATGATGTGATGACAACGCAAACACAAAGTGAAATTGGTCCTGTATCCATTGAGTTAAAAGAGATTCGATCAAG AATTCATGATCTAACAATAACAAAGGTGGAATTCGAGTCAATTGATCTAGATACTGACAAATACTAAGTAGTAATTTAGT TCTAGACCCAAAGCATCGGGGACAGACCGACAGAGCAACATAAATTGTATTACTATAGCATTTACACTAATTAGTAATTA GAGAGGACCCATATATAGGAACAAAAATATTTGTAGTTTAATTGAGACAGACTTTCCTTCAAAGAAATAATGAATACTAA AGTTATATTGTTGTGTCAACAATCAAGGCAAATATGACAATGAAGTTTTGTTTAGTAACTTATCACTTGCAGCATTGCTT CTATTTGAACATTTGGATTTCTAATTTGCCAGCAAACTAAAATTCTGAATGAGTAATCACACATTTGAGATTCATACTAC CGGTGTTGTCAATCTTGGATATAGCGCATAGCGGGATGACTATATAATTTATACTATATAGTGTATACATATCTAAATGT TAAAAAATGATAAAAAATACTCAAAATCATGACATTCACAATAAAAATTTATAGGTGTCTTAAACAAAACTTAAATACCA ACAAAAGTCAAGGTAATTGAGAAGTTTAAGCCTCTAAGGTTTAAACTAAACTGCCTAAAAACATGAAAATTCAAATTAAA GTTTCATAAATAGGAATAATCAATTATCCTCTTTTAGGTCCAATCCTTCCTCTTTATTACTTTCGCTACTATATCATAGT TGTAGATCTCTTCCTCCATATTCTCTTTTAAACCAGGCTCTTACCACTAACTTCCAAAAAGGCCCTAACATATTTCCGCC GCTTTAGCAGCTGCGACGTAGCCACTATACTAAACTGTAAGGCTATGCTGAAGCCTGGAGAGGCCAGGCGCTACACACTG ATATGGTGTTGTAGTGCCACGATTACAACCCTGATTCACTAAATGTATGCAGCTCCAAAATGTCAAATTTATGTTTCCTT CTGTGATGTTCACCTGTGTTATTTTACTACGTCTCTAGGATTTTCTACAATTTGTGGTTTATGGTTTATTGGAAAATGAA GGATTCAGGTTTAAGCTTAATCCTGGCAGTGTTGGAGTCTTTTTTGGATCTTGTGTGCTTTATATTTGCAATCTGCATTG AAGTTATGCTTCTAAAGGATCAACTTTGTTTTTCCACTCCAGTTAATTGTCATTGTCATGTACATCTCAAAGTTACTGCT ATATCATGTATAGATCAATAAATTTGAATATTCATAAAATTACATGATGGAACCATGTGATGTGAGCATCTTTTGTATCT TGAATGTGTTTGACATGCCAAATTTTCCAGGGTAACAATTTTTGATGAACTTTCAATGCTCATGTCACGGCTTGACTTGA TGGTAAGTTTTGATTTCTTTCAATACAAACATCACTCGCCTCTGTCATTGGGACCTCTTGGTATAAATAGTGAAATCCGA ATAGATTGTGAATTCTTTATACTATAAGGAGAGAGGAGAAAAAATGATATAGCACGATGCAATGAATCCTCACATTCATT TTCTGCCCCCCTCCCCCCATGATACCTCTTCGAAATCTTTAATTTGAATATGTGCTTGCTTTGTTTCTCGGTCTAGGTGG ACTTTTCAGCGTTCTCCCGGTTCTATGAGTTTGTATTCTTTATGTGTCGCGAAAATGGTCAGAAGAACATCAGTAAGTAC TAATATTTGCAATTTGTACTAATCTTCTACTTTTATTGATTCCATTTAGTGGTGAAGCTGTATGTAATACTCATGGTAAT TTCCTTTGCTATTTAACTTTGATAATTTACAGCTGTTAGCAGGGCAGTAACTGCATGGAAATTAGTTCTTGCTGGGCGGT TTCCACTGCTTCATCAATGGTGTGAATTTGTTGAGGTAAAATACAGGACTGTGGAACTTTTGTGGGTTTTCCTAGTCACG GGGTTAGTGTTTGAGAGGGAGGCCTTGCAGTTTTAACCATGTATAAAGAAACCACTCTCTGGGCTTAATGAAAGTAACTA CATTGAAAACATAAATTATTCCACCCACATAAACAATACTAGAGGCCGATGACTATTCCCCCTTGAAATACACAGATCAA TCTCTCTCTGGGCTTAATGAAAGTAATTACTTGCTAATCCTATTAACCCTGAATAACTACAAAATGGTAAATTGCTTGGA ATAATACGATAAAAAGTGATACAATTGGACCCTGCTCTAAGATTATTAGGGTTAGTCTTACTCAACCAATTTAAAATCTT GGTCTATACGGCTCGGTTTATTTAATCTGTGACTGAAATGGATTGAACCATGTTAACCTGGTTCTATCCATCGTTACAAC CTGGTAGGTTGTATTCTCTTACTTTCATTTTGTTGGAATCTGATCTATTACTTCTTATTCAGAAAAATCAACGATACAAC ATCTCGGAGGATACCTGGCAGCAGGTTCTAGCTTTCACCTGGTGCACACGCGATAATCTGGAAGCCTATGATCCTGAAGG TACTATTCTCATAGGTGTACTTTTTACAATTAGCTAGGCCTAGAGATGTAGATATCCATACTTATTTACCTCTCTCCGCA TGCAATTTATTCTTTTTAAATGCAATAATACTTGCATGGTTATTTCATTTCTGCTTCTTATGCTGCACCTGAATGTTTTT TTGTATAATTACTATATGAAAATGAAAAAAAAGAAAAAGAAAATTAAGTACTCTTGTTAAATGGTGACATCAGAAAAAGG AAATTAAGCTTTTGACCTCTTTTAAATAGTGGAAGGTTAGATTATAAGCTTGTTGACTACTTGAATATCGTTACTTGGGG AATCAGCATTGCAAGGGACTTTTGGGTGGCTGATGGGAGGGGGACTTGTGTGTGTAGAAAAGATGTTTTGAGTATTGACT AATCGGTGCAATTATCTTTTCTTTTTCTGCTCTTGCAGGTGCTTGGCCTGTTTTAATAGATGATTTTGTCGAGCATATGT ACAGGTTTGGTTTCTTTATGGCCACACAGAAGCATCGTAAACTTTTGCAAGGATTTTGATGATGATATCACTGTTAGGTT TACTGAAAATTCAATTTTTGATAGAACCCAATAGAATTGATTGATCCGTATAACCCCCCCTAATATGCTGAATATTAGTT AATAATTATTCCATGAAAGTCAGATGATCTCCCATCGGTTGTTTTTATGCTTAAAGATTGTTTATTAGCATGTTTCAGAC ATATTATTAAGTTGCCAACGCCAAAGGTTCAGTAGGATATCTTTCATGACATTGTATATTTTGGAGGTCATGCAGAATAA TGGTAACCCAAAATATGGTGTATTTTGGATCAGTATTGTCAATCCCGGATAGCGGCCGACCCCAAAAATGCTATAGCGGT ATAACGCATAGCGGGATGGCCGCTATGCTAAATATTTATATATCTATATAATCTATACAATATACATAAATAAATGATAA AAAATACTAAACATGTGAAATTCATAATTAATATTAAAAAGTCATCTGACACAAAAAGAAATCACACAAGTCTGAACAGT GAGAGATATAAAAGGAGTGAATAAAGTCAAAATAGAACCATTGAAACAGAGAAGAGCGAAAAAATAAGAACCATAAAAGA GACAAAGTAAAACACAAAAGAAAGAAAAACAGGGGAAAAACCGCTGCTGAACGAGAAGAAAATAGATTGTTGGGGGTCTG CAGATGGTTGCAGGAGGATCGCTGGAGCGTGTCGGTCTCTACGGTGGCTGGCTGTCCGTCGCTTGATTGGTGCATTACAG GTAAGAAGCCAGACGTTGTTATCGGGAAGGACGGATGTGCCAGGAGGAAAACATATTCCATCAATTTTAACTGAAACCCA AAATTACGACAGAAAACCCAATATTACCCCTAAAAGCTTACCCTAATCTTCAATCTGTGAGGGCGACTTTTAGTTTTCCC TTCGTTCTAGAACTGCTAAGGCTCTGCGAAGTCGGCGATTTCAGCCGCGATGGCTGCGGCATTAGACCACTCCGCTATGG GGCTGCTCCACCCTGCTCTGCCGCGGCATCGCTATTGCACGTAATTGACAAGCCTGTTTTGGATTAACAAGTAGGTCAGG GTCATTGTAAGGGTGGCATGTACTTGGTTGACCTTTTGGAACCTTGAGGGATGCAAGCAACATATTCTCTAACTCGTTCT TTTTAATACATTTTTTTAATGGGTGAAAGTTATGTGGGTTCCACTAAATCACATGGGTCCCACTCTCTATTTGGTGGAAC ACACATGATTTTGCTCAATAATGAAGAACGTGGTATGAAAATTCCTCACATGGGTTTGAGAATTGTTTGAAAGATCTCTT CAATTGTTTATGCTAGTGGACGTATTAATGAGATTCGGAACCAGCTCTCTATAATTGCTACAGATTTACGCATATCTTGG TTTTATTGAAGATCCTGATGCTGATAACTTGAGATTAAAACATAGAATGTTCATTTAGGTTGTACATTGATTGTATGGCC AAGGAGAATTTCACATCAAATTTCTAAACTAAATCTGGCGACAAGATTCTTCTATTAATTGACCTTTTATCCAGATGACT ATTACACTTTGTGCTAAATTTGCTGCCTAGATTGAGTGATTTTAGATTTCCTAGACCAAATACAAATTTTAGAAGTGGTA TTAATTCAGACAGTGGGGCTTGCAAATCACTCACATAGGTTTGTGATCAGAGACTTGCTGAGGAAGAGAAGTGACTCAAG TTAGTACTTGCTCTGATACTTCCAATCTGGAGATCAATATATATTAGACTAATTACAAGTCTTTTCCTAGTGGCATAACC ATTTACGAGTGTTGGTCTTTAGGTTGATATAAGACCCACTGACTGTGACCTAGTTGTTAAGAGTTCAATCTTTGCAACTC CCATTTTTTAATTAAGAAAAAAATAGTTGAATCTCAGCTTAAGGTAAAGTGATTTTATGCAACGTCCATGCTTTAAATTC AAATGAACTTGTGTGAAGGGGCCTGTAACCAATCACGAGCCTTCACTAACAACTTAAGCTTTATAGGAGACAAACTCAGT TCATCCGTTGTGGAAGTTTCCTTTCAAATCTAGATTTTGCGGCCATTTGTTGAGGTTACTAATTCTTTCCCTCTGGTTTC AGTCTAAATCAATAGATGGAAGGAGAAATCAAGTGATATAATTCTAGGATTTGACTCTTCTAAAGTGAAATTTGGACTTT AGAGGATAAAGTGCGAAATTATAGATAGTGATTGGAAATTTAACTATTAATATTGTAACAACTTCATACTATTATACATG TACATGCCTTTTATCACAATCTTGACTGTTGATTTACCAATCAATGGTTATCCTTTAAAGTTCATCTCCCAATTACTGGA CCAGATTTGTAGCACATGATTGTGAAAGTGTTAATGTAGCTCTAACTTTCGGTACATGATATTCGGTTTGGTGGAAGAAT TTGCTAATATCAACGAGTTCGCTCTGAATATTGCTGGTCATTTTTATGCTGTGTTTTTTCACAAAAATGTACGCAAACAA AAGAAACCCATAATCTGAAATGATACAACAATGACAACAACGAAAGTCTTATCTCACTGAGTGTAGATAATCTGAAGGAT AATCTTGTGAAATTCTTTAGGTGCTGTCTCAATATGACATGAATTTAACAAATCTTGCTTTGAAATCTTGGTGTTACTTA AATGATAAACTTGTATATGGTTTCCTTCCCAGTTGGGTATAGTTTTGCCTTCCTTGTTTAAAACTTTGCAACAAAGCCAA TTTCAGGCACCATTTGTAGGATTAATTTTTTGCACATTGGATTTTATGGTATCGGCATCTCTGAACTTGGTTTCTTGTAT AATCCTGCAGGATACAAGGATCATATTATGATTATTCCAACTTTCGCTGCAACTGTGGTGATACAGAATCCCAGTCATGT GTTCTTGAGGATCCACTTCCTGGTCAGTTTATTGAAGTTACAACCATTCCCTGATATAAGGAAATAGAGTTGTACTCACT GGTGCACAAGGGGTTGTTTGATTCCTTTCTCTATTTTCTGAATTTAAAAACTGTTTTTCAAAAGAAGAAAAGAAAAAAGC AGTTAGGGCACGATATTTTGCAAAACTAAAAACAGAAAACTAAAAATGAAAACAGAAAACATACATGAGAGATGTTTTGA GATTTTAGTTTTAAAAACTAAAAATAAGAACAATTTTGAAGAATAGTTTATATCAAATAAGTTTAAAAAAAAAAACTAAA ACCTAAGGGCTTGTTTGGTTTCTGTATTAAGAACAATTTTTAAAATCTGCTTTTCAAAAGAAAAAACTGTTTGAATGAGA TGTTTTACAATGTTAAAAAGGTGATTTTGAAAGCTTAAAAAAGAAACATAAAGCATCTCTGCGATGTTTTGAGATTTTAG TCTTAAAAGTAAAATCTGAAAATAAGAACTGTTTTTAAAACAGTTTTTGAAAACATGTTACAACGGACAATTTTTTTTTA ATTTTCAAAATTTGAAAACAGGAAACAATTAAAAAACTGCAAACAAATAGAACCTTAGGGTTTTTTTTTTATGTTTTTTT ACAGGACTGAGAAGTGTTTCTGTTCTCAAGAGGAAGTTACCTGAGGAGACATCAAACAATGATATGGAGCACTCTAGTGC ATCTGATGAGTTGATTTCTTCAAATTGCAAGAGAAGTAGAGCTCATGGGGCAGTAGATTGGGAGGACCATGATCCACTAG GGAACACATCAGAGGACTGCATGGAAACTAGCAGGCAAAATAGCCCCTTGTGTTCATCCAAGTCCCAATGTGCAGTTGAA GGTTGTCTTTCAAAGGGGTTTGCAGGGCTGCTCTCAACTCGGTCCTTTGTGCAGTTTGGTAGAGAGAGGAGGGCTTCCTT TAGATGAAGGATCTGTCATAGTAAAGGTATACAAATTTCTTGTTAGTTGGTCTGTTGGTGAATGGGCTATAACTATGTAA TTCTAGTTTCTCATTTTTTTGTGGCATTGTAATATTTTGTTGGTGAGTGCTAATTAACTATCCATTGCTATTTTGATAAA ATCAATAAATGTATTTTACTGTTTCTCTTCTGTTTTCTTTTAAAATTTTGTTGTTTAAATAAATAAAAAACAATATCTCA TATACCTTTATTGATTTTATATTTAGTTATATACTTTTATTTTATAGATAACCTGGTTTTATGAGAATTTAAAATAATAG TGTGACTTCACTAATAAGTTAGCTGAAAAGTGAAAAGCTAGTGGAAAACTTAACTAGTATAAAACTTATTAAATTTATTC TCATCCGGAATACCTTTTCTAGTTGTGTAGCAAGCTTTTCAACTTCTTTTCATGGCTCTTGTGCGATCCTTGCTGAGCTT TTGGTTTGAAATTTGTGGTGCTTGTAGGGTGTGCTGTGAGAGTGTTTCTTTGTATGTTATTCACTTGTTGGAGGTTCCTG CCATGTTTTCGCCTATAAGCATTGGGTTGGAGGACATAATTGCTATCTCTATATGAAAGGGGTTGAAATAGTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAATTAGGGGTTGAAATAGTTATATATACTGTTGAGATGTTGTGGTATT TTTTTTTTTAATTTCCTTCTTGTACTATTACTCTGGCTTCAGGAAGTTCATAAAACAGTTGAATTGAATAACAGACGAAA ATTAACCGTCAA
CDS sequence (LotjaGi1g1v0504100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCATCATCTCGGATCGACATCTTTGAGATTTATCGAAGATACTGTGACATAAGATCAGGACATGCATATGTTGT TGGGGAAGAAGGTTACAGGCAACACAGTGACTTTCACAAGGCTAAGGTCTCCAGGGAGGCACTGACTCAGCTCTCAAAAT TGGTGGAGTCCAGAGTTAGTACAGGGGTAACAATTTTTGATGAACTTTCAATGCTCATGTCACGGCTTGACTTGATGGTG GACTTTTCAGCGTTCTCCCGGTTCTATGAGTTTGTATTCTTTATGTGTCGCGAAAATGGTCAGAAGAACATCACTGTTAG CAGGGCAGTAACTGCATGGAAATTAGTTCTTGCTGGGCGGTTTCCACTGCTTCATCAATGGTGTGAATTTGTTGAGAAAA ATCAACGATACAACATCTCGGAGGATACCTGGCAGCAGGTTCTAGCTTTCACCTGGTGCACACGCGATAATCTGGAAGCC TATGATCCTGAAGGTGCTTGGCCTGTTTTAATAGATGATTTTGTCGAGCATATGTACAGGATACAAGGATCATATTATGA TTATTCCAACTTTCGCTGCAACTGTGGTGATACAGAATCCCAGTCATGTGTTCTTGAGGATCCACTTCCTGGACTGAGAA GTGTTTCTGTTCTCAAGAGGAAGTTACCTGAGGAGACATCAAACAATGATATGGAGCACTCTAGTGCATCTGATGAGTTG ATTTCTTCAAATTGCAAGAGAAGTAGAGCTCATGGGGCAGTAGATTGGGAGGACCATGATCCACTAGGGAACACATCAGA GGACTGCATGGAAACTAGCAGGCAAAATAGCCCCTTGTGTTCATCCAAGTCCCAATGTGCAGTTGAAGGTTGTCTTTCAA AGGGGTTTGCAGGGCTGCTCTCAACTCGGTCCTTTGTGCAGTTTGGTAGAGAGAGGAGGGCTTCCTTTAGATGA
Protein sequence (LotjaGi1g1v0504100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDASSRIDIFEIYRRYCDIRSGHAYVVGEEGYRQHSDFHKAKVSREALTQLSKLVESRVSTGVTIFDELSMLMSRLDLMV DFSAFSRFYEFVFFMCRENGQKNITVSRAVTAWKLVLAGRFPLLHQWCEFVEKNQRYNISEDTWQQVLAFTWCTRDNLEA YDPEGAWPVLIDDFVEHMYRIQGSYYDYSNFRCNCGDTESQSCVLEDPLPGLRSVSVLKRKLPEETSNNDMEHSSASDEL ISSNCKRSRAHGAVDWEDHDPLGNTSEDCMETSRQNSPLCSSKSQCAVEGCLSKGFAGLLSTRSFVQFGRERRASFR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 179 | 179 | 24.713 | ||
| PANTHER | 7 | 233 | 227 | 1.2E-63 | – | |
| PANTHER | 7 | 233 | 227 | 1.2E-63 | ||
| Gene3D | 39 | 180 | 142 | 2.4E-33 | – | |
| Pfam | 81 | 177 | 97 | 1.6E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0504100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…