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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014764
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.385s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0041729.1
n.a. PREDICTED: DCN1-like protein 5-like [Glycine max] gi|356562876|ref|XP_003549694.1| chr0 13741414 13746038 +
2 domain predictions
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Lj0g3v0253979.1
n.a. PREDICTED: DCN1-like protein 4-like isoform X1 [Cicer arietinum] gi|502174435|ref|XP_004515517.1| chr0 131767853 131771932 +
2 domain predictions
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Lj0g3v0284739.1
n.a. PREDICTED: DCN1-like protein 5-like [Glycine max] gi|356562876|ref|XP_003549694.1| chr0 147744980 147749810 -
2 domain predictions
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Lj1g3v2975940.1
n.a. PREDICTED: DCN1-like protein 2-like [Glycine max] gi|356531764|ref|XP_003534446.1| chr1 33711629 33720447 -
2 domain predictions
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Lj3g3v0950140.1
n.a. PREDICTED: DCN1-like protein 2-like [Glycine max] gi|356525740|ref|XP_003531481.1| chr3 11925588 11933742 +
2 domain predictions
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Lj3g3v0950140.2
n.a. PREDICTED: DCN1-like protein 2-like [Glycine max] gi|356525740|ref|XP_003531481.1| chr3 11925588 11933742 +
2 domain predictions
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LotjaGi1g1v0504100.1
n.a. Defective in cullin neddylation protein; TAIR: AT3G28970.1 defective in cullin neddylation protein (DUF298); Swiss-Prot: sp|Q6PH85|DCNL2_HUMAN DCN1-like protein 2; TrEMBL-Plants: tr|I3SK46|I3SK46_LOTJA Defective in cullin neddylation protein; Found in the gene: LotjaGi1g1v0504100 LjG1.1_chr1 102172567 102181698 -
2 domain predictions
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LotjaGi3g1v0133600.1
n.a. Defective in cullin neddylation protein; TAIR: AT3G12760.1 defective in cullin neddylation protein; Swiss-Prot: sp|Q8BZJ7|DCNL2_MOUSE DCN1-like protein 2; TrEMBL-Plants: tr|I3SDD7|I3SDD7_LOTJA Defective in cullin neddylation protein; Found in the gene: LotjaGi3g1v0133600 LjG1.1_chr3 16930624 16939698 +
2 domain predictions
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LotjaGi3g1v0351400.1
n.a. Defective in cullin neddylation protein; TAIR: AT1G15860.1 defective in cullin neddylation protein (DUF298); Swiss-Prot: sp|Q92564|DCNL4_HUMAN DCN1-like protein 4; TrEMBL-Plants: tr|I3SMJ5|I3SMJ5_LOTJA Defective in cullin neddylation protein; Found in the gene: LotjaGi3g1v0351400 LjG1.1_chr3 73029670 73034678 -
2 domain predictions
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LotjaGi4g1v0284100.1
n.a. Defective in cullin neddylation protein; TAIR: AT1G15860.1 defective in cullin neddylation protein (DUF298); Swiss-Prot: sp|Q5PPL2|DCNL5_RAT DCN1-like protein 5; TrEMBL-Plants: tr|I1MTX5|I1MTX5_SOYBN Defective in cullin neddylation protein; Found in the gene: LotjaGi4g1v0284100 LjG1.1_chr4 65637177 65641968 +
2 domain predictions
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