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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0512500 |
| Transcript ID | LotjaGi1g1v0512500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component, putative; TAIR: AT3G29400.1 exocyst subunit exo70 family protein E1; Swiss-Prot: sp|Q9FGH9|E70B1_ARATH Exocyst complex component EXO70B1; TrEMBL-Plants: tr|A0A151TCH8|A0A151TCH8_CAJCA Exocyst complex component 7; Found in the gene: LotjaGi1g1v0512500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:103422234..103424270) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTTTTGAGGAGTCTGAGCATGTGATTCCAGAGCTGGAAAGGGAGGAGAATTTGATTGCTGCAGCAAGGCATATTGT GAAGGCATTAGGTTCAAATAAGCACCTTACTAGTGATGCCAAGAAAGTTCTGGCAGATCTTGGCTCACAGTTGTCCTCCA TGACCATGCACAGTGAGAAGGAGGAGAGGAAGCAAGGCCGAAAGAACGATGATATCGACGAGGATGACGAAGGGGAGGAA GAGGAAGAAGAGGAAGAGGGTGTTAGTGCTGCTGAACAAAGGCTTGGTGAGATTCAGGAGAAAATAATGAGATGGGAGGA AGATCAGGCCATGATTTGGGATTTGGGGCCTGAAGAAGCATCTGAATATCTGAATGCTGCTAATGAAGCGCGCAGGTTGA TCGAGAAGCTGGAGAGTATGCAGTTGAGTAAAGAGGACCAAGAATACAAGTTAATGCAGAAGGCTTATAGTGTTCTTCAA ACAGCTATGGCAAGGCTTGAAGAAGAGTTCAGGAACCTGCTTATCCTGAACAGGCAACCTTTTGAACCGGAATATGTCTC TTTTCGGTCCATTGAGGAAGATGCTGTTGATGGAAACTCTTTTGTCTCTATAGGTGATGAATCATTTGAGGAATCACTAC GAAGAGACAGTGTCAGCAGAGCCTCTGAGGAGCATGTCATTGATTTAGTTCATCCAGCTGTGATCCCAGATCTCAGGTGC ATTGCAAACCTGCTGTTTGCTTCTAACTATGTCCAGGAATGTTCCCATGCTTACACCATTGTCCGCGGCGACGCATTAGA CGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGTATTGAGGATGTCTTGAAAATGGAGTGGGGTCCTTTGAATTCAA AGATAAAAAGATGGATTTGGGCTGTGAAAATATTTGTCAGGGTGTATCTTGCAAGTGAGAAGTGGCTTAGTGAACAGATT TTCGGGGAGGGTGAGCCTGTGAGTCAAGCTTGTTTTGTTAATGCATCCAAGCCTTCAATCTTGCAGCTTCTGAATTTCGG CGAAGCCATGTCTATTGGCCCTCACCAGCCTGAAAAATTGTTCCGTATCCTTGACATGTATGAAGTTCTAGCAGATCTTA TGCCAGACATTGATGTTTTGTACTCAGATGAGGTTGGTTCCTCAGTGAAAATTGAATGTCATGAGGTTCTAAAGAGATTA GGTGATTGCGTGAAGGCAACATTCATTGAATTTGAAAATGCCATTGCATCGAATGCGTCAACAGCCCCTTTTGTAGGTGG TGGAATACATCCTTTGACAAGGTATGTTATGAATTATCTTAGGACTCTCACCGACTACAGTGAAACACTCAACCTGCTTC TGAAGGATCAAGAAGATGATGACGCGATTTCGCTATCACCTGATATGAGCCCGGGTACAGAGGAAGATAGCAGAAGCCAG GGATCTCCAGATAGAGCTTCCTCAATGACTCTCCACTTCATATCAGTTGCTTCAATCTTGGAATGCAACCTTGAGGACAA GTCCAAGTTATACAAAGAAATTCCCTTGCAGCACTTGTTCTTAATGAACAACTTGCATTACATGGCTGAAAAGGTTAAAG GGTCGGAGCTCAGGATCATATATGGAGATGGGTGGATTAGAAAGCACAACTGGAAGTTTCAGGAGCATGCAATGAAATAT GAAAGGTCTACTTGGATTTCCATTCTCAACTTTCTCAAAGATGAGGGAATTCATGTTCCCGGTACGAGTTCAGTCTCGAA AAGCCTTCTTAAGGAGAAGTTAAGAAGCTTCTACCTTGGCTTTGAGGATGTGTACAGGATCCAAACAGCTTGGCTTATCC CTGATGTTCAGCTTCGCGAAGACTTGAGGATTTCTATATCTGTCAAAGTGATCCAAGCTTATAGGACATTTGTTGGAAGA AATAGTAGTCACATAAGTGACAAACACCTTAAGTACAGTGCTGATGATTTGGAAAACTATCTTTTGGATTTCTTTGAAGG GTCTCCAAAGTTGTTGCAAAATCCCCATAGGAGGTGA
CDS sequence (LotjaGi1g1v0512500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTTGAGGAGTCTGAGCATGTGATTCCAGAGCTGGAAAGGGAGGAGAATTTGATTGCTGCAGCAAGGCATATTGT GAAGGCATTAGGTTCAAATAAGCACCTTACTAGTGATGCCAAGAAAGTTCTGGCAGATCTTGGCTCACAGTTGTCCTCCA TGACCATGCACAGTGAGAAGGAGGAGAGGAAGCAAGGCCGAAAGAACGATGATATCGACGAGGATGACGAAGGGGAGGAA GAGGAAGAAGAGGAAGAGGGTGTTAGTGCTGCTGAACAAAGGCTTGGTGAGATTCAGGAGAAAATAATGAGATGGGAGGA AGATCAGGCCATGATTTGGGATTTGGGGCCTGAAGAAGCATCTGAATATCTGAATGCTGCTAATGAAGCGCGCAGGTTGA TCGAGAAGCTGGAGAGTATGCAGTTGAGTAAAGAGGACCAAGAATACAAGTTAATGCAGAAGGCTTATAGTGTTCTTCAA ACAGCTATGGCAAGGCTTGAAGAAGAGTTCAGGAACCTGCTTATCCTGAACAGGCAACCTTTTGAACCGGAATATGTCTC TTTTCGGTCCATTGAGGAAGATGCTGTTGATGGAAACTCTTTTGTCTCTATAGGTGATGAATCATTTGAGGAATCACTAC GAAGAGACAGTGTCAGCAGAGCCTCTGAGGAGCATGTCATTGATTTAGTTCATCCAGCTGTGATCCCAGATCTCAGGTGC ATTGCAAACCTGCTGTTTGCTTCTAACTATGTCCAGGAATGTTCCCATGCTTACACCATTGTCCGCGGCGACGCATTAGA CGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGTATTGAGGATGTCTTGAAAATGGAGTGGGGTCCTTTGAATTCAA AGATAAAAAGATGGATTTGGGCTGTGAAAATATTTGTCAGGGTGTATCTTGCAAGTGAGAAGTGGCTTAGTGAACAGATT TTCGGGGAGGGTGAGCCTGTGAGTCAAGCTTGTTTTGTTAATGCATCCAAGCCTTCAATCTTGCAGCTTCTGAATTTCGG CGAAGCCATGTCTATTGGCCCTCACCAGCCTGAAAAATTGTTCCGTATCCTTGACATGTATGAAGTTCTAGCAGATCTTA TGCCAGACATTGATGTTTTGTACTCAGATGAGGTTGGTTCCTCAGTGAAAATTGAATGTCATGAGGTTCTAAAGAGATTA GGTGATTGCGTGAAGGCAACATTCATTGAATTTGAAAATGCCATTGCATCGAATGCGTCAACAGCCCCTTTTGTAGGTGG TGGAATACATCCTTTGACAAGGTATGTTATGAATTATCTTAGGACTCTCACCGACTACAGTGAAACACTCAACCTGCTTC TGAAGGATCAAGAAGATGATGACGCGATTTCGCTATCACCTGATATGAGCCCGGGTACAGAGGAAGATAGCAGAAGCCAG GGATCTCCAGATAGAGCTTCCTCAATGACTCTCCACTTCATATCAGTTGCTTCAATCTTGGAATGCAACCTTGAGGACAA GTCCAAGTTATACAAAGAAATTCCCTTGCAGCACTTGTTCTTAATGAACAACTTGCATTACATGGCTGAAAAGGTTAAAG GGTCGGAGCTCAGGATCATATATGGAGATGGGTGGATTAGAAAGCACAACTGGAAGTTTCAGGAGCATGCAATGAAATAT GAAAGGTCTACTTGGATTTCCATTCTCAACTTTCTCAAAGATGAGGGAATTCATGTTCCCGGTACGAGTTCAGTCTCGAA AAGCCTTCTTAAGGAGAAGTTAAGAAGCTTCTACCTTGGCTTTGAGGATGTGTACAGGATCCAAACAGCTTGGCTTATCC CTGATGTTCAGCTTCGCGAAGACTTGAGGATTTCTATATCTGTCAAAGTGATCCAAGCTTATAGGACATTTGTTGGAAGA AATAGTAGTCACATAAGTGACAAACACCTTAAGTACAGTGCTGATGATTTGGAAAACTATCTTTTGGATTTCTTTGAAGG GTCTCCAAAGTTGTTGCAAAATCCCCATAGGAGGTGA
Protein sequence (LotjaGi1g1v0512500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFEESEHVIPELEREENLIAAARHIVKALGSNKHLTSDAKKVLADLGSQLSSMTMHSEKEERKQGRKNDDIDEDDEGEE EEEEEEGVSAAEQRLGEIQEKIMRWEEDQAMIWDLGPEEASEYLNAANEARRLIEKLESMQLSKEDQEYKLMQKAYSVLQ TAMARLEEEFRNLLILNRQPFEPEYVSFRSIEEDAVDGNSFVSIGDESFEESLRRDSVSRASEEHVIDLVHPAVIPDLRC IANLLFASNYVQECSHAYTIVRGDALDECLFILEMERLSIEDVLKMEWGPLNSKIKRWIWAVKIFVRVYLASEKWLSEQI FGEGEPVSQACFVNASKPSILQLLNFGEAMSIGPHQPEKLFRILDMYEVLADLMPDIDVLYSDEVGSSVKIECHEVLKRL GDCVKATFIEFENAIASNASTAPFVGGGIHPLTRYVMNYLRTLTDYSETLNLLLKDQEDDDAISLSPDMSPGTEEDSRSQ GSPDRASSMTLHFISVASILECNLEDKSKLYKEIPLQHLFLMNNLHYMAEKVKGSELRIIYGDGWIRKHNWKFQEHAMKY ERSTWISILNFLKDEGIHVPGTSSVSKSLLKEKLRSFYLGFEDVYRIQTAWLIPDVQLREDLRISISVKVIQAYRTFVGR NSSHISDKHLKYSADDLENYLLDFFEGSPKLLQNPHRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 673 | 662 | 0.0 | – | |
| PANTHER | 12 | 673 | 662 | 0.0 | ||
| MobiDBLite | 51 | 91 | 41 | - | – | |
| MobiDBLite | 56 | 71 | 16 | - | – | |
| MobiDBLite | 72 | 88 | 17 | - | – | |
| Coils | 81 | 108 | 28 | - | – | |
| SUPERFAMILY | 109 | 666 | 558 | 3.09E-145 | ||
| Coils | 120 | 147 | 28 | - | – | |
| Coils | 149 | 169 | 21 | - | – | |
| Pfam | 296 | 662 | 367 | 2.8E-120 | ||
| MobiDBLite | 463 | 486 | 24 | - | – | |
| MobiDBLite | 470 | 486 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi1g1v0512500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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