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LotjaGi1g1v0513400.1

Overview

Field Value
Gene ID LotjaGi1g1v0513400
Transcript ID LotjaGi1g1v0513400.1
Lotus japonicus genome version Gifu v1.2
Description O-methyltransferase, putative; TAIR: AT4G35150.1 O-methyltransferase family protein; Swiss-Prot: sp|Q84KK5|D7OMT_GLYEC Isoflavone 7-O-methyltransferase; TrEMBL-Plants: tr|I3SP90|I3SP90_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0513400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:103539608..103541900) extracted from Lotus japonicus Gifu genome v1.2.

CTGACTATTCAATATAGTTATAGTTAACCCAAAAATTCTATATAAAGGGAATCAAAGTCTGACAAATCACAACACAAACC AAGAGTTTTTCAAAACTCAACATAAAAACCATGTCTTCAAGCAATGGCCGTGCTGCCAGTGAAATCTTTAAAGGCCAAGC TCTCGTATACAGACACCTATTTGCCTTTGAAAATTCCATGTCTCTTAAATGGATCGTCGAGTTGGGCATACCAGACATAA TCCACAACCATGGCCACCCCATAACCCTTTCAAATTTGGTGTCAATTTTGCAAATTCCACAAGAAAAGATCGGTAACGTG CGTCGTCTCATGCGCTACCTCGCACACAATGGATTCTTCGAAATCGTAAGAATCCATGAAGACCAAGAAGAGAAGGAAGC ATATGCTCTCACTCCTGCATCAGAGCTTCTTGTCAAAAGCAGTGAAATGTGTTTAGCTCCAATGGTTGAGTGCATTCTTG ACCCAACTTTGTCAGGCTCATACCATTTGTTGAAGGAGTGGATCTATGAAAAAGATAAGACACTATTCAACGTCTCATTG GGATCTGATATATGGGATTTTCTTCAGAAAAATCCTTCATATAATAGCATATTCAATGAGGCAATGGCCAGTGATTCTCG AGTGTTAAACTTGGGACTGAGAGATTGCAATTCGGTCTTTGCGGAATTGGAATGTGTGGTGGATGTTGGTGGTGGAACCG GAACCACGGCTAAGATTCTCTGTGAGAAATTTCCTAACTTGAAATGCATAGTGTTTGATCGTCCACAGGTTGTGGAAAAC TTGTCCGGAAGCAATAATGTGAGTTATGTTGGTGGGGACATGTTTCAATCCATTCCTAAGGCTGATGCAGTTCTACTTAA GGTATCAACTTACTAACATCTGCAAATTTATTTATTTGACTATTTCACATACCATAACTCACTCCTCACATGAGATGAAT AGATCATTATCTCTACTGATCATTTGGTTTCTAGCTCTTTTTTGGCCTCACTAGTAAAATTGTGTTATGCTGGGTGTGAG AAAAACATGAGTAATTTTGAATGACATGAAATTATTTAATTTTGGGTTATCTAAATGACTTTAGACAAAGTTTAGATCAA ATCATCATAGGTTTAAGAGAATCATTGATATTTAAGATGAGTGAGCTGAAAATTTCATATTTTATCGCTTATCTTAAATA ACATTATGTTATTATGGGTTGAAAATCTTTGTCATGAACAACTCTTTCAATTTGTGAGGCAAAAAATGTTTGGCCCCCTC ACATTATGTTGTTATGGGTTGAAAATCTTATATTTCATTTTTTGTTGTATTTTTCTGTTCCACAAGTGAAATTTTTGTTA CCTTAAAAACATGAGTGACTTAATTATGAATTTACAAAGTACCTTTTAACTTCACTAGCTCACATGACAAAATTTTATAG GTGAGACTATAGCTTTTAAAATTGAACCGGACTTGTCATTTCAACGGATTGCACCGGAAACCAATCAAATGTTAGGTCCA TTTAAAGGAAAACTAGTGGATCTTATAACCGATAAGAACCGGTCTAACCAAGTTAAAATTTGGTCAAAATTGACCAGCTT GATTTTCAAAACATTGGATAGGACACAAAAATAACACAAGAAATGAAAACATCCTGATCCGTTACTAAGATATATATTAC TGATTTTCCATCAATTTTTCCTGCAGTTGATTTTGCATGACTGGATTGATAAGGATTGCATAAAGATATTGCAAAAATGT AAGGAAGCTATTTCAGATAATGGGGAAAAGGGAAAAGTGATTGTCATAGACATTGTGATAAATGAAAAGCAAGAAGAGCA CGAAATTACTGGAACGAAGCTGCTTATGGATGTGAACATGGCAAGTCTTAATGGAAAAGAGAGAGATGAACAAGAGTGGA AGAAACTCTTCCTGGAATCAGGCTTCAAAGACTACAAAATTTCTCCTTTGACTGGATTGTTGTCTCTTATTGAGATATAT CCTTAATCACTTTTGTTATGCACGCGACCAAATAAAGTTATTGCAATATGTATTTGATTTCCACATTACTGCTAGTCTGT TGAATAAATCGTGATGAAGAGTAAAAGAAGAATTTATAAGAAATACTAGTCAATGTGTCTTATTTTATTCGATTTGTTCC ACATGTACTCGTGACAAAATCAAATACGTCTTCTTTTGACAATTGACTAACATAAAGTCCGAAAAGGATGCGATTGTCTG GCAAAAGAACTGATTTTTTTTTTCACTCATTTATTTACAAATATTTATACAAC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0513400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCTTCAAGCAATGGCCGTGCTGCCAGTGAAATCTTTAAAGGCCAAGCTCTCGTATACAGACACCTATTTGCCTTTGA AAATTCCATGTCTCTTAAATGGATCGTCGAGTTGGGCATACCAGACATAATCCACAACCATGGCCACCCCATAACCCTTT CAAATTTGGTGTCAATTTTGCAAATTCCACAAGAAAAGATCGGTAACGTGCGTCGTCTCATGCGCTACCTCGCACACAAT GGATTCTTCGAAATCGTAAGAATCCATGAAGACCAAGAAGAGAAGGAAGCATATGCTCTCACTCCTGCATCAGAGCTTCT TGTCAAAAGCAGTGAAATGTGTTTAGCTCCAATGGTTGAGTGCATTCTTGACCCAACTTTGTCAGGCTCATACCATTTGT TGAAGGAGTGGATCTATGAAAAAGATAAGACACTATTCAACGTCTCATTGGGATCTGATATATGGGATTTTCTTCAGAAA AATCCTTCATATAATAGCATATTCAATGAGGCAATGGCCAGTGATTCTCGAGTGTTAAACTTGGGACTGAGAGATTGCAA TTCGGTCTTTGCGGAATTGGAATGTGTGGTGGATGTTGGTGGTGGAACCGGAACCACGGCTAAGATTCTCTGTGAGAAAT TTCCTAACTTGAAATGCATAGTGTTTGATCGTCCACAGGTTGTGGAAAACTTGTCCGGAAGCAATAATGTGAGTTATGTT GGTGGGGACATGTTTCAATCCATTCCTAAGGCTGATGCAGTTCTACTTAAGTTGATTTTGCATGACTGGATTGATAAGGA TTGCATAAAGATATTGCAAAAATGTAAGGAAGCTATTTCAGATAATGGGGAAAAGGGAAAAGTGATTGTCATAGACATTG TGATAAATGAAAAGCAAGAAGAGCACGAAATTACTGGAACGAAGCTGCTTATGGATGTGAACATGGCAAGTCTTAATGGA AAAGAGAGAGATGAACAAGAGTGGAAGAAACTCTTCCTGGAATCAGGCTTCAAAGACTACAAAATTTCTCCTTTGACTGG ATTGTTGTCTCTTATTGAGATATATCCTTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0513400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSSSNGRAASEIFKGQALVYRHLFAFENSMSLKWIVELGIPDIIHNHGHPITLSNLVSILQIPQEKIGNVRRLMRYLAHN GFFEIVRIHEDQEEKEAYALTPASELLVKSSEMCLAPMVECILDPTLSGSYHLLKEWIYEKDKTLFNVSLGSDIWDFLQK NPSYNSIFNEAMASDSRVLNLGLRDCNSVFAELECVVDVGGGTGTTAKILCEKFPNLKCIVFDRPQVVENLSGSNNVSYV GGDMFQSIPKADAVLLKLILHDWIDKDCIKILQKCKEAISDNGEKGKVIVIDIVINEKQEEHEITGTKLLMDVNMASLNG KERDEQEWKKLFLESGFKDYKISPLTGLLSLIEIYP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:1.10.10.10
1 107 107 2.5E-34
IPR036388
PIRSF
PIRSF005739
1 356 356 2.3E-125
IPR016461
PANTHER
PTHR11746:SF179
2 356 355 6.0E-184 –
PANTHER
PTHR11746
2 356 355 6.0E-184 –
SUPERFAMILY
SSF46785
10 111 102 1.32E-28
IPR036390
ProSiteProfiles
PS51683
20 356 337 77.867
IPR016461
Pfam
PF08100
30 78 49 2.2E-18
IPR012967
Gene3D
G3DSA:3.40.50.150
108 356 249 2.8E-83 –
SUPERFAMILY
SSF53335
112 354 243 1.46E-52
IPR029063
Pfam
PF00891
131 338 208 2.6E-50
IPR001077
CDD
cd02440
196 295 100 0.00239285 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008171
Molecular function O-methyltransferase activity Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule.
Subterm of
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0513400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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