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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0516100 |
| Transcript ID | LotjaGi1g1v0516100.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G38990.1 Malectin/receptor-like protein kinase family protein; Swiss-Prot: sp|Q9FID9|Y5389_ARATH Probable receptor-like protein kinase At5g38990; TrEMBL-Plants: tr|C6ZRP3|C6ZRP3_SOYBN Serine-threonine kinase; Found in the gene: LotjaGi1g1v0516100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:103867546..103869544) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAGACAAATAAGGAACGTGCGCAGTCAAGTTCTCCAAAGTCCACACATCATTGAGGAAAACATGGAGGGGTTTTGG TCTGCGAGGTGTTGAACTCTCTGCAATCTCACCAGGTGAATTTGCATCCTAGTATCTTCAGGTACGCTTTGGCCACTTCC ATCATCAATTTAGTGAATTTGCATCCTAGTATTAAATTGTTTGTTTCAATTTAATAGTAATAACACCCTTGACAAAGGTG ACTTGAGTTTGATATTAATTTTGGCGTTGACTCTAGTCCAAAAGGTAAGGCATTCACTTTGATGATGATGTATTATCAGA TATAAGTTAGCTGAGATTAATTATTGAAGAAAAGTGAAGCAAGCATAGGCAATTAGGCATATATAGCTGAATCTTTGTGT TTCAAATTGGAAGAATGGTTCTCAAGTTTTTGGGTTTTGGCCGTTCCAAGAAGCACTCAAGTTCATCTAAGAAGCCCTGC CCAACTGTAATAGAAGAGCTGTGCACTCGATTTTCTCTCGCCGATCTTGAGAAAGCAACCAATAACTTTGATGAAAAAAA TGTAATTGGACAAGGAGCCTTTTGTAAAGTTTATAAAGGTTATCTCAAAATTGATCATGTTGCTACTGCAGTAGCTGTGA AGCGAAGGGGTATTTTATTAAGGCAGCAAGGTGAGGAACCGTTCAAGATGGAAACTAAGTTGCTCTGCCAACTCCGTCAC CCCAATTTGATCACTCTGATCGGATTCTGCTTCGACGATGATGAGAAGATTATCGTGTACGAGTACATGTCCAATGGTTC CCTCACTGATCGAGTACTGAGTAAGGATGCAAGGGAACCACTGTCGTGGAAGACGAGGCTAGAGATCTGCATAGGAGCAG CACGTGCGGTGCACTACATTCACTCGGGACTCAAACGCACCATCATTCACCGTCGCGTCAACCCCTCTAACATTCTTTTG GATGACAACATGGTACCTAAACTCTCTGATTTCGGGATTTCCATACAAGGACAGTTGTTCACAGAAAAACCAAAACCAAT TGAAGGAAAACCCCCTGCTGGTAATAATTAATTTTTCTCAATTTTAGTCATATAATAATTAGTGCAAAAAATATTTAATT GATCTATTTATTAGGTACATTTGGTTACATGCCTCCCGAGGGTCTAAGCCAAGAAATCTTGACAGATAAATTTGATGTTT ATTCATTTGGTGTTGTTCTATTAGAAGTGGTATGTGCAAAGCGACTCGGGAGATTTATTTATGAGACTTCTGATTGTGAA GAAATAGAAACGTCTAATAATGGTTCAGAATCTCCGTCTCATATCACAGATAATGGTTCAGAATCTCCATCTCATATCAC AGATCATGGTTCAGAATCTCCATCTCATATCACAGATCATGGTTCAGAATCTCCATATCATATCACAGATCATCATATCA CAGATCACATTATGTTAAAGCTCCAAGCAGAGGAGATTGATCCGGCTCTGGTAGGAAATATTGCACCAGAGTGTTATGCA GTGTACATAGATATCATTGATAGGTGCTTGAAGCACGAACCAGATGAACGACCAACAATGGGTGAAGTGGAAGTTCTACT TGAGCATGCGCTGACTTTGCAACTGGTGGAAGACGCCAGAGATACTAGTGACGATTATCTCTGATTATTCACTAGCATTA CACAAACACAACAACAAGAGGCTCCAATTTAAGCTTAGAATATGTTGTTTTCATGAGCCATGGGTGCATGCCGTATTTAT TTCTTTGTTGCTTCGCAACCTGTAACATCAACCACTGCTTGAGACTAACACACACAATAATCTACTGCATAATTTAGCAG AAAATTAGAGTAAGAGGAAGTGTTTTGGGGGCTGAATTTCTTTCGTATTTCTCCGGTTATTATTTGCATCATATACTCAT GTACTTATAGTATGATAACTGACTGTTACAACTATCAAAGAGTTACACCAACTTCATTTTAATATATTGTTTGTGCTCA
CDS sequence (LotjaGi1g1v0516100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTCAAGTTTTTGGGTTTTGGCCGTTCCAAGAAGCACTCAAGTTCATCTAAGAAGCCCTGCCCAACTGTAATAGA AGAGCTGTGCACTCGATTTTCTCTCGCCGATCTTGAGAAAGCAACCAATAACTTTGATGAAAAAAATGTAATTGGACAAG GAGCCTTTTGTAAAGTTTATAAAGGTTATCTCAAAATTGATCATGTTGCTACTGCAGTAGCTGTGAAGCGAAGGGGTATT TTATTAAGGCAGCAAGGTGAGGAACCGTTCAAGATGGAAACTAAGTTGCTCTGCCAACTCCGTCACCCCAATTTGATCAC TCTGATCGGATTCTGCTTCGACGATGATGAGAAGATTATCGTGTACGAGTACATGTCCAATGGTTCCCTCACTGATCGAG TACTGAGTAAGGATGCAAGGGAACCACTGTCGTGGAAGACGAGGCTAGAGATCTGCATAGGAGCAGCACGTGCGGTGCAC TACATTCACTCGGGACTCAAACGCACCATCATTCACCGTCGCGTCAACCCCTCTAACATTCTTTTGGATGACAACATGGT ACCTAAACTCTCTGATTTCGGGATTTCCATACAAGGACAGTTGTTCACAGAAAAACCAAAACCAATTGAAGGAAAACCCC CTGCTGGTACATTTGGTTACATGCCTCCCGAGGGTCTAAGCCAAGAAATCTTGACAGATAAATTTGATGTTTATTCATTT GGTGTTGTTCTATTAGAAGTGGTATGTGCAAAGCGACTCGGGAGATTTATTTATGAGACTTCTGATTGTGAAGAAATAGA AACGTCTAATAATGGTTCAGAATCTCCGTCTCATATCACAGATAATGGTTCAGAATCTCCATCTCATATCACAGATCATG GTTCAGAATCTCCATCTCATATCACAGATCATGGTTCAGAATCTCCATATCATATCACAGATCATCATATCACAGATCAC ATTATGTTAAAGCTCCAAGCAGAGGAGATTGATCCGGCTCTGGTAGGAAATATTGCACCAGAGTGTTATGCAGTGTACAT AGATATCATTGATAGGTGCTTGAAGCACGAACCAGATGAACGACCAACAATGGGTGAAGTGGAAGTTCTACTTGAGCATG CGCTGACTTTGCAACTGGTGGAAGACGCCAGAGATACTAGTGACGATTATCTCTGA
Protein sequence (LotjaGi1g1v0516100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLKFLGFGRSKKHSSSSKKPCPTVIEELCTRFSLADLEKATNNFDEKNVIGQGAFCKVYKGYLKIDHVATAVAVKRRGI LLRQQGEEPFKMETKLLCQLRHPNLITLIGFCFDDDEKIIVYEYMSNGSLTDRVLSKDAREPLSWKTRLEICIGAARAVH YIHSGLKRTIIHRRVNPSNILLDDNMVPKLSDFGISIQGQLFTEKPKPIEGKPPAGTFGYMPPEGLSQEILTDKFDVYSF GVVLLEVVCAKRLGRFIYETSDCEEIETSNNGSESPSHITDNGSESPSHITDHGSESPSHITDHGSESPYHITDHHITDH IMLKLQAEEIDPALVGNIAPECYAVYIDIIDRCLKHEPDERPTMGEVEVLLEHALTLQLVEDARDTSDDYL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 7 | 124 | 118 | 8.0E-31 | – | |
| PIRSF | 9 | 302 | 294 | 9.1E-29 | – | |
| PANTHER | 29 | 382 | 354 | 1.1E-114 | – | |
| PANTHER | 29 | 382 | 354 | 1.1E-114 | – | |
| SUPERFAMILY | 35 | 375 | 341 | 3.42E-69 | ||
| ProSiteProfiles | 45 | 376 | 332 | 35.255 | ||
| Pfam | 48 | 250 | 203 | 8.9E-40 | ||
| MobiDBLite | 264 | 312 | 49 | - | – | |
| MobiDBLite | 264 | 306 | 43 | - | – | |
| PIRSF | 324 | 383 | 60 | 11.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0516100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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