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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0516300 |
Transcript ID | LotjaGi1g1v0516300.5 |
Related isoforms 7 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT2G39360.1 Protein kinase superfamily protein; Swiss-Prot: sp|O80623|Y2393_ARATH Probable receptor-like protein kinase At2g39360; TrEMBL-Plants: tr|I3SQ45|I3SQ45_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0516300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:103898301..103900331) extracted from Lotus japonicus Gifu genome v1.2.
CTGAAAGTTATTTATTGCGGCCTTGCGGGTAGTAAGCACCAAACAAGCAGCAACGGATTCTTCTTCTTCAGCAAATTCAG GTTCGTTGCTTTCTTCTATTCCTCACTTGTTTGTTACGAATTCATAATTACTCCCTTGACAAACATTCAACTCAACTCAA CTATATCATATGAAATTCATTTCTTCAAATTTGGTGACTTGGAGTGGTTTGTTTCATCACCTGTACCATTATTTTGCGTT GACCCCAAAAGATTAGTATTCATTGGTGGATTTGATATATTATCAGGTAAAGATAGCTGTGATTATTGTAGTGTAGTGAG GTATTGGAAGAGACATTCATGATTAGAAGAATGGCTCTCCAGTGTTTCTGTTTTGGTTGTTCGAAGAAGCACTCAAGTTC ATCTAAGAGGCCTTACCAAACAACAGTACTAGAAGAGTTATTCCATCATTTTTCTCTCGCTGATTTAAGGAAAGCAACCA ATAACTTCCATGAAAATAATTTAATTGGAAGAGGAGGCTTTGGCAAAGTTTATGAAGGTTGTCTTCAACTTGATCATGTT GCTACAGCAGTAGTAGCAGTGAAGGTAAAGAGTATACATATATATTATAAGCCGAAGGAGTTCAAGAACGAAATTGAGTT GCTCTGCCAACTCCGTCATCCTAATTTGATATCTCTGATCGGATTCTGCGTCCATAAAGACAAGGAGATTATCGTGTACG AGTACATGTCCAATGGTTCCCTCGCTGATCGCCTATTCGAAAGCGATGCAAGGGAACCACTGTCATGGAAGAAGAGGCTT GAGATCTGCATAGGAGTAGCGCGTGGGTTGCACTACCTTCACTCGGGACTCAAACGCACCATCATTCACCGTAACATCAA ACCCGCTAACATTCTTTTGGATGACAACATGGAACCTAAAATCTCTGATCTCGGGATTTCTGTACAGGGAGCGTTGTTCA CAGAAAAACCAAAACCAATTCAAGTACGAGCAAAAGAAACCTTTACAGGCTTTTCCGGTAATTGTTTCATAGTTTTAGTT ATATAAGCTTAGTGCTTTAAAAAATTATCTGCCAAGTAAATTGATACGGTTGAGTAGTGTAATAAGGTACAACAATTCTC AGCTTATGAGCTAGTTTTTGTGGATGAGTTGGGCTTATACTGAGTTTTTAATATATTACTTTAACTTAATAGGTCCACTC GATTACATCTCCCCTGAACATTTATACCAAGGCACCGTGACGGATAAATGCGATGTTTATTCATTTGGTATTGTTCTATT AGAAGTGGTATCTGGAAAGCCGGTTAATGCCATTAGGAATGAGATGCCTGGTTCCCAGCAGCCACCAAATGAAGAAATAG AAATGTCTAATAATGGTTCAGAATCTTCTTCAGATGATGATCATATTTCTATGTATTGGGATTCTTACATTATGCTAAGG CTTCGAGCAGAGGACATTGATCCGGCTCTGGTAGGAAATATTGCACCACAATGTTATGCAGCATACATCGATATCATTGA CAGGTGCTTGAAGGATGAACCAAATGAACGACCAATAATGGGCGAAGTGGAGGTGCTACTTGAGCATGCGCTGACTTTGC AACTGGAAGCAGATGCCACAGATACTAGTGATCATGATTACCTCTCATTATTCACCACCATTACCTAACCACAACAACCA CAGATGCCAATTTCAGCTTAGAACATGTTGATGCCTTGTTGGTTTGGCTGTCTCATATCAGATCATGTTATTTTTTGTAC TTATCACATGACTTTTTCGTGTGTTGTTAGCAAAATTGCTTAATCATGTATGTTGCTGAAGCCTTTAATTTTAGTTCAAA TGGAAATATTATTGTTCCTTTCCAAAGCATAAAAGTTCATCCATCATGCACTCATGAGCACTAACATAAGATACTAAAGA AATCAACCAACAACGTTTGATGCAACCAAGATATATGACTTCTTTCATAAAACCCCATATGGAACGAGAAAAGAAAAAAA ACACTTTCTTTCATAAATCTTTGAGCTTTTC
CDS sequence (LotjaGi1g1v0516300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTAGAAGAATGGCTCTCCAGTGTTTCTGTTTTGGTTGTTCGAAGAAGCACTCAAGTTCATCTAAGAGGCCTTACCA AACAACAGTACTAGAAGAGTTATTCCATCATTTTTCTCTCGCTGATTTAAGGAAAGCAACCAATAACTTCCATGAAAATA ATTTAATTGGAAGAGGAGGCTTTGGCAAAGTTTATGAAGGTTGTCTTCAACTTGATCATGTTGCTACAGCAGTAGTAGCA GTGAAGGTAAAGAGTATACATATATATTATAAGCCGAAGGAGTTCAAGAACGAAATTGAGTTGCTCTGCCAACTCCGTCA TCCTAATTTGATATCTCTGATCGGATTCTGCGTCCATAAAGACAAGGAGATTATCGTGTACGAGTACATGTCCAATGGTT CCCTCGCTGATCGCCTATTCGAAAGCGATGCAAGGGAACCACTGTCATGGAAGAAGAGGCTTGAGATCTGCATAGGAGTA GCGCGTGGGTTGCACTACCTTCACTCGGGACTCAAACGCACCATCATTCACCGTAACATCAAACCCGCTAACATTCTTTT GGATGACAACATGGAACCTAAAATCTCTGATCTCGGGATTTCTGTACAGGGAGCGTTGTTCACAGAAAAACCAAAACCAA TTCAAGTACGAGCAAAAGAAACCTTTACAGGCTTTTCCGGTCCACTCGATTACATCTCCCCTGAACATTTATACCAAGGC ACCGTGACGGATAAATGCGATGTTTATTCATTTGGTATTGTTCTATTAGAAGTGGTATCTGGAAAGCCGGTTAATGCCAT TAGGAATGAGATGCCTGGTTCCCAGCAGCCACCAAATGAAGAAATAGAAATGTCTAATAATGGTTCAGAATCTTCTTCAG ATGATGATCATATTTCTATGTATTGGGATTCTTACATTATGCTAAGGCTTCGAGCAGAGGACATTGATCCGGCTCTGGTA GGAAATATTGCACCACAATGTTATGCAGCATACATCGATATCATTGACAGGTGCTTGAAGGATGAACCAAATGAACGACC AATAATGGGCGAAGTGGAGGTGCTACTTGAGCATGCGCTGACTTTGCAACTGGAAGCAGATGCCACAGATACTAGTGATC ATGATTACCTCTCATTATTCACCACCATTACCTAA
Protein sequence (LotjaGi1g1v0516300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIRRMALQCFCFGCSKKHSSSSKRPYQTTVLEELFHHFSLADLRKATNNFHENNLIGRGGFGKVYEGCLQLDHVATAVVA VKVKSIHIYYKPKEFKNEIELLCQLRHPNLISLIGFCVHKDKEIIVYEYMSNGSLADRLFESDAREPLSWKKRLEICIGV ARGLHYLHSGLKRTIIHRNIKPANILLDDNMEPKISDLGISVQGALFTEKPKPIQVRAKETFTGFSGPLDYISPEHLYQG TVTDKCDVYSFGIVLLEVVSGKPVNAIRNEMPGSQQPPNEEIEMSNNGSESSSDDDHISMYWDSYIMLRLRAEDIDPALV GNIAPQCYAAYIDIIDRCLKDEPNERPIMGEVEVLLEHALTLQLEADATDTSDHDYLSLFTTIT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 5 | 5 | - | – | |
SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
Phobius | 1 | 19 | 19 | - | – | |
Phobius | 6 | 14 | 9 | - | – | |
Gene3D | 11 | 129 | 119 | 1.9E-31 | – | |
Phobius | 15 | 19 | 5 | - | – | |
Phobius | 20 | 384 | 365 | - | – | |
SUPERFAMILY | 29 | 359 | 331 | 1.19E-71 | ||
PANTHER | 34 | 369 | 336 | 1.5E-112 | – | |
PANTHER | 34 | 369 | 336 | 1.5E-112 | – | |
ProSiteProfiles | 50 | 361 | 312 | 37.898 | ||
Pfam | 50 | 351 | 302 | 2.9E-43 | ||
ProSitePatterns | 56 | 82 | 27 | - | ||
Gene3D | 130 | 377 | 248 | 3.3E-49 | – | |
MobiDBLite | 267 | 296 | 30 | - | – | |
MobiDBLite | 269 | 295 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0516300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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