Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0516300 |
| Transcript ID | LotjaGi1g1v0516300.8 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT5G39000.1 Malectin/receptor-like protein kinase family protein; Swiss-Prot: sp|Q9FID8|Y5900_ARATH Putative receptor-like protein kinase At5g39000; TrEMBL-Plants: tr|I3SQ45|I3SQ45_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0516300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:103903753..103906105) extracted from Lotus japonicus Gifu genome v1.2.
GGCGGATTCTGAAAGTTAATTATTGTGGGCAGAACCTAGTTGACTAAAGTAAGCACCAAACAAGCAGCAACAGCTTCTTC TTCAACAACTTCAGGTATGCTGCTTTCTTCTATTCCTCACTTGTTTGATACAAATTCATAGTTACTCCCTTAACAAACAT TCAACTCTACTATATTAAATCTATTTCTTCAAATTTGGTGATTTTGAGTGGTTTGGTTAGGTTTCATCCCTTGTCTACAT TATTTTTGTGTTGACCCCAAAAGATTGGTATTTATTCATTCGTGTTGTTGATGTATTATCAGGTAAAGATATATAGCTGT GATTATTGTAGTGCATTGCAAGAGGCATTGATTAGATTAGAAGAATGGCTCTCAAGTATTTCTGTATTGGCTATTCGAGG AAGCATGCAAGTTCATCTAAGAGGCCTTACCAAACAACGTTAATAGAAGAGTCGTTCCATCATTTTTCTCTCGCTGATTT AAAGAAAGCAACCAATAACTTCCATGAAAATAATTTAATTGGAAGAGGAGGCTTTGGCAAGGTTTATAAAGGTTGTCTTC AACTTGATCATGTTGCTACAGCAGTAGTAGCAGTGAAGGTAAAGAGTATACATATATATTATAAGCCGAAGGAGTTCAAG AACGAAATTGAGTTGCTCTGCCAACTCCGTCATCCTAATTTGATATCTCTGATCGGATTCTGCGTCCATAAAGACAAGGA GATTATCGTGTACGAGTACATGTCCAATGGTTCCCTCGCTGATCGCCTATTCGAAAGCGATGCAAGGGAACCACTGTCAT GGAAGAAGAGGCTTGAGATCTGCATAGGAGTAGCGCGTGGGTTGCACTACCTTCACTCGGGACTCAAACGCACCATCATT CACCGTGACATCAAACCCGCTAACATTCTTTTGGATGACAACATGGTACCTAAACTCTCTGATCTCGGGATTTCCGTACA AGGAGCATTGTTCACAGAAAAGCCAAAACCAATTCAAGTAAAAGAAGTTTTTCATTCAACACAAAGCGGTAATGTTTTCA TAGTTTTAGTTATATAAGCTTAGTGCTTTAAAAATTTATCTGCCAAGTAAATTGATACGGTTGAGAAGTGTAATTAGGTA CAGACATCCTTGCTCATGAGCTAGTTTTTGTGGATGAGAGTTGGGCTTATATTGAGTCTTAATAGATAACTTTTACTTAA TAGGTACATACAATTACATGGCCCCCGAATATATACGCAAAGGCACCGTGACGGATCAATACGATGTTTATTCATTTGGT ATTGTTCTAATAGATGTGGTATCTCGAAAGCCAGTTGATGCAATTAGGAATGAGATGTTTGGTTTCCAGCAACCAACAAA TGAAAAAAGAGAAATGTCTAATAATGGTTCAGAATCTTCTTCAGATGATCATATTACTATGATTGAGGTGCCTGCGCCTG AGCCACCAAATGAAGAAGTAGAAATGTCTAATAATGGTTCAGAATCTTCTTCAGATGATCATATTACAATGATTGAGATG CCTGTGCCTGAGCCACCAAATGAAGAAGTAGAAATGTCCAATAATGATTCAGAATTTTCAGATGATCATATTACTATGTC TTGGGGTTCTAAGATTAATATGTTAAGGCTTCGAGCAGAGTATATTGATCCGGCTCTGGTAGGAAATATTGCACCACAAT GTTATGCAGCATACATCGATATCATTGACAGGTGCTTGAAGGATGAACCAAATGAACGACCAAACATGGGCGAAGTGGAA TTGCTACTTGAGCATGCGCTGACTTTGCAACTGGAGGCAGATGCCACAGATACTAGTGATCATTGATTACCTCTAATTAT TCACCAGCATTACCCAACCACAACAACCAGAGATGCCAATTTCAACTTAGAACATGTTGCCTTGTTGGTTTGGCTGTCTC ATATCAGATCATGTTATTCTTTCTAGTCATCACTTGACTTTTTCCTGTGTTGTTAGCAAAATTGCTTAATCATGTATGTT GCTGAAGCCTTCAATTTAATTTCGAATGGAAATGTTATTGTTGCTTTCCAAAGCATAAAAGTTCATCCACCATGCACTCA TGAGCACTAACATAAGATCTAAAGAAATCAACCAACAACGTTTGATGCAACCAAGATATCTGAGTTCTGTCATAAAACCC CATATGGAACGAGAAAAAAATATACACATTCTTTCATATACCTTTGAGCTTTTCTCATCCCAAGTTTCTACTATGAAAAA TTATTATTACTTTGGAATAAGGAGTAATAAACATTTCAAAACATACAGTTGCGGTTGCGGGAGTCATAGTTTCAAAGCAA GTGAGGTAACCATTCAACTTTAAAAGTCACAGC
CDS sequence (LotjaGi1g1v0516300.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCTCAAGTATTTCTGTATTGGCTATTCGAGGAAGCATGCAAGTTCATCTAAGAGGCCTTACCAAACAACGTTAAT AGAAGAGTCGTTCCATCATTTTTCTCTCGCTGATTTAAAGAAAGCAACCAATAACTTCCATGAAAATAATTTAATTGGAA GAGGAGGCTTTGGCAAGGTTTATAAAGGTTGTCTTCAACTTGATCATGTTGCTACAGCAGTAGTAGCAGTGAAGGTAAAG AGTATACATATATATTATAAGCCGAAGGAGTTCAAGAACGAAATTGAGTTGCTCTGCCAACTCCGTCATCCTAATTTGAT ATCTCTGATCGGATTCTGCGTCCATAAAGACAAGGAGATTATCGTGTACGAGTACATGTCCAATGGTTCCCTCGCTGATC GCCTATTCGAAAGCGATGCAAGGGAACCACTGTCATGGAAGAAGAGGCTTGAGATCTGCATAGGAGTAGCGCGTGGGTTG CACTACCTTCACTCGGGACTCAAACGCACCATCATTCACCGTGACATCAAACCCGCTAACATTCTTTTGGATGACAACAT GGTACCTAAACTCTCTGATCTCGGGATTTCCGTACAAGGAGCATTGTTCACAGAAAAGCCAAAACCAATTCAAGTAAAAG AAGTTTTTCATTCAACACAAAGCGGTACATACAATTACATGGCCCCCGAATATATACGCAAAGGCACCGTGACGGATCAA TACGATGTTTATTCATTTGGTATTGTTCTAATAGATGTGGTATCTCGAAAGCCAGTTGATGCAATTAGGAATGAGATGTT TGGTTTCCAGCAACCAACAAATGAAAAAAGAGAAATGTCTAATAATGGTTCAGAATCTTCTTCAGATGATCATATTACTA TGATTGAGGTGCCTGCGCCTGAGCCACCAAATGAAGAAGTAGAAATGTCTAATAATGGTTCAGAATCTTCTTCAGATGAT CATATTACAATGATTGAGATGCCTGTGCCTGAGCCACCAAATGAAGAAGTAGAAATGTCCAATAATGATTCAGAATTTTC AGATGATCATATTACTATGTCTTGGGGTTCTAAGATTAATATGTTAAGGCTTCGAGCAGAGTATATTGATCCGGCTCTGG TAGGAAATATTGCACCACAATGTTATGCAGCATACATCGATATCATTGACAGGTGCTTGAAGGATGAACCAAATGAACGA CCAAACATGGGCGAAGTGGAATTGCTACTTGAGCATGCGCTGACTTTGCAACTGGAGGCAGATGCCACAGATACTAGTGA TCATTGA
Protein sequence (LotjaGi1g1v0516300.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALKYFCIGYSRKHASSSKRPYQTTLIEESFHHFSLADLKKATNNFHENNLIGRGGFGKVYKGCLQLDHVATAVVAVKVK SIHIYYKPKEFKNEIELLCQLRHPNLISLIGFCVHKDKEIIVYEYMSNGSLADRLFESDAREPLSWKKRLEICIGVARGL HYLHSGLKRTIIHRDIKPANILLDDNMVPKLSDLGISVQGALFTEKPKPIQVKEVFHSTQSGTYNYMAPEYIRKGTVTDQ YDVYSFGIVLIDVVSRKPVDAIRNEMFGFQQPTNEKREMSNNGSESSSDDHITMIEVPAPEPPNEEVEMSNNGSESSSDD HITMIEMPVPEPPNEEVEMSNNDSEFSDDHITMSWGSKINMLRLRAEYIDPALVGNIAPQCYAAYIDIIDRCLKDEPNER PNMGEVELLLEHALTLQLEADATDTSDH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 7 | 125 | 119 | 1.4E-32 | – | |
| SUPERFAMILY | 19 | 410 | 392 | 2.01E-72 | ||
| PIRSF | 22 | 298 | 277 | 1.2E-33 | – | |
| PANTHER | 31 | 292 | 262 | 8.9E-114 | – | |
| PANTHER | 31 | 292 | 262 | 8.9E-114 | – | |
| ProSiteProfiles | 46 | 415 | 370 | 38.76 | ||
| SMART | 46 | 415 | 370 | 2.9E-38 | ||
| Pfam | 46 | 405 | 360 | 1.1E-45 | ||
| ProSitePatterns | 52 | 78 | 27 | - | ||
| Gene3D | 126 | 317 | 192 | 2.3E-41 | – | |
| ProSitePatterns | 171 | 183 | 13 | - | ||
| MobiDBLite | 271 | 291 | 21 | - | – | |
| MobiDBLite | 271 | 319 | 49 | - | – | |
| Gene3D | 322 | 426 | 105 | 5.6E-6 | – | |
| PANTHER | 354 | 422 | 69 | 8.9E-114 | – | |
| PANTHER | 354 | 422 | 69 | 8.9E-114 | – | |
| PIRSF | 374 | 421 | 48 | 17.0 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0516300.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…