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LotjaGi1g1v0523300.3

Overview

Field Value
Gene ID LotjaGi1g1v0523300
Transcript ID LotjaGi1g1v0523300.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT5G16000.1 NSP-interacting kinase 1; Swiss-Prot: sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1; TrEMBL-Plants: tr|A0A0L9U1X3|A0A0L9U1X3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0523300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:104810267..104814017) extracted from Lotus japonicus Gifu genome v1.2.

ATGAGGATGCCAAGAGGAGTTTCTGTTCTTTGTTTTGCAATTTTCTTGGTTTGGAGCTCTGCAAGTGCCTTGCTATCTCC TAAAGGAGTGAACTTTGAAGGTAAATTTTGTAACTTTCCACTTCATATCAGTTCAATATGCAGAGTTTTCAATTTGGTCT CTCTGAATGCAGTGCAAGCTTTAATGGGTATAAAGGAACTTCTACATGATCCTCGTGGTGTTCTAGATAATTGGGATGGG GATGCAGTTGATCCATGTAGCTGGGCCATGGTAACATGTTCAAGTGACAACCTGGTCATTAGCCTGTAAGATTTTTCTTC AATCTTCTATTTGAAGTTGCAATATTTGTTTGAACTTTGAACACTCAGCAAAAGCTAAATGAACTGGTCTTGCAATTTTG CAGGGGCACTCCCAGTCAAAATTTGTCTGGTACTCTATCTGCAACCATAGGCAACTTAACCAATCTTCAGACTGTGTAAG TAACCAGAAATTTAGTTTAATATACCCAAGATGGAAGATTCTTATATACTTACCTTTTCTCATAATCATTTCTGACACTC GGAATCAAATTCTGGCACTCTGAAGCTACTCACAGAAGCTTCTTCGCCAGAGAATTGATTTTGGCTTCAAAATCAATTAC AGAAGAATTTCCAAACATGCACTAAGATGAGTGTTTTGACCACTTTCAGGTTGCTACAGAATAACAACATAAGTGGACCA ATCCCTTCAGCGCTAGGAAAACTTCCCAAGCTTCAAACACTTGATCTCTCTAATAATTCCTTCAGTGGGGAAGTTCCTCC CTCACTGGGTCACCTGAGAAGCCTCCAATACCTGTAAGGATGTTACATTATACAAGTAGAAGCTATTTTCAGTGTGAATG TCTAAACTCTAAAGCTAAAGGTTTATTAAAATTGTTTTGTTTCAGGAGGCTCAATAATAACAGTCTTGTTGGTGAATGCC CAGAATCACTGGCTAACATGACTCAGCTTTCTTTTCTGTAATATACATGATCCTCTTCTTTTGTGTCTTATGCATTCTGT TCTTATTTTTTTGTGTTCCTAAAGATGTTTTCTTGTTTTGTGATTAACAATTCAGAGATTTGTCCTACAACAATCTTAGT GGCCCAGTACCCAGAATTTTGGCCAAATCATTCAGGTAATACTCTCTCTGTCTCTCTTATGATTGTGCATTTCCTTCTAG GAGGTACTAAGTGAAAGACTAATTTCATTCCTTTCCTCTTGTTTCAGCATTCTTGGCAACCCCCTTGTTTGTGCTACTGG AAAAGAACCAAATTGCCATGGGATCACACTGATGCCCATGTCCATGAATTTAAACAATACTGAAGGTATGATCTTTTTAG TGCATGTTTGGAAATTCTAAAATCAGAACCAGTTCTGGAGAGAAGTTTCTGTAAATAGCTTCTAAATTTCAGAATTGATT ATGAGAAAAGCCATTTAGTTTTTACTTTTTGAATTTGATTGTTCATGCCTTGTGTTCCCTTCCAATGTACTGTACTATGA TATATTCTGCATAGTCATTGTTTTAATTCTGACTGTAATATCTTTGCTTTCCTAGATGCTTTGCCATCAGGCAAACCGAA AACTCATAAGATGGCCATTGCCTTTGGCTTGAGTCTGGGATGCCTCTGCCTTATACTTCTTGGTTTTGGAGCTTTTCTTT GGTGGAGGCACAAGCATAACCAACAAGCATTCTTTGATGTTAAAGGTACTTTACATGCAATTTGGAACCTTTAAGTGGAG GTTAAATGTATATACAAGAATGTTAATGTGCAATACAGGTTAACATTTTCAATTATAGTACATGTTTGGATATATGGTAG ATTTTCACGTTGGAAGGAGAATTGATTCTGGGAGAAGCTACTCCTAGTAGCTTTTGTGGGAGAAGAATTGATTCTGCAAT ATTTAAACGTTAATTCAAACATGCTAGCTATATATTGATCTAATTTATGACATTATTAAATGTTTCAGACCGGCATCATG AAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCCATTCAGAGAACTCCAGATTGCTACTCACAACTTCAGCAACAAGAAT ATACTGGGAAAAGGTGGTTTTGGAAATGTGTACAAAGGAGTTCTCTCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAA AGATGGCAATGCCATTGGAGGAGAGATTCAGTTTCAGACTGAAGTTGAAATGATCAGCCTGGCAGTGCACAGAAACCTCC TCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGCTTCTAGTTTACCCCTACATGTCTAATGGCAGTGTTGCTTTG CGTCTGAAGGGTAAGCTCAGTTGTAACCTTTCCAACTCAAATTCAGTGCATGTTTGGATACACAGTAAGGAAAAAGAATT GAGTCTGAGAGAAGCTACTCCTAGTAGCTTTTGTGATAAAACAATTGATTCTGGAAGATCTGAACGTGAACAGAAACATG CTATCAAAGTACCTAGTTTTGGGGTTGATTCTGATGCCAATTTGGTTTTGTTTTCAGGTAAGCCAGTCTTGGATTGGGGC ACAAGGAAACATATTGCTTTAGGAGCTGCAAGGGGGCTACTCTACCTTCATGAGCAGTGTGATCCAAAGATAATCCACAG GGATGTCAAAGCTGCTAATATTTTGCTTGATGACTATTGTGAAGCTGTAGTTGGAGATTTTGGGCTAGCAAAGCTTTTGG ATCACCAAGACTCTCATGTCACAACTGCAGTGAGGGGCACTGTGGGTCATATTGCCCCAGAGTATTTATCCACTGGTCAA TCCTCTGAGAAGACCGATGTCTTTGGATTTGGCATTCTCCTTCTTGAGTTAATCACAGGCCAAAGAGCTCTGGAATTTGG AAAAGCAGCTAACCAGAAAGGAGCCATGCTTGATTGGGTAAGCTTGTTTCCCTTTATTCATTAGAATTCCTTTCCAGTTA GAAATATAATATATCATTCACGTGTTCTTTACCAACAACTTAAGCTTTTGAGATAGTCGGTCCATCATATGGTATCGGAG CCTCTTAGGGGGGGTGTCAAAACAGGTTAACACGCCACCAACCTTCCTATAAGGGGGTGGAACGGATTGAGCCGCCACCA AAATATGCGTTTAATATTACAACACGCCTTGTTCTGAAGTGGTTTGGCAGGTTGGGCCATCAAAAAAAGTCTGAGTTGTG AGCTAATCTCACAAGCTCTCACTTATTATAATAAAAAGTTGAATTTTAGCACAATGTAGGTGAACTTGTTCATTATTCAT GCTTCAAGCCTAATGTGCTCTTACGTGAGAGGGCGCGTTAGAATATAATATTAAGTCATTCATGCTTCATTTACTCAACG GCTTAAGCTTTGGATTATAACAGCCCTTATCTCAAATCAAATAGTTAGACCTTTTACTGTTGACATTCAGGTAAAGAAAA TTCATCTAGAAAAGAAGCTTGAGTTGCTGGTAGACAAGGATCTCAAGAGCAACTATGACCAGATTGAGCTTGAGGAAATG GTTCAAGTGGCTCTCTTGTGCACTCAATACCTCCCAGGCCACAGGCCAAAAATGTCTGAAGTGGTTCGCATGCTCGAAGG TGATGGTTTAGCGGAGAGATGGGAAGCTTCTCAGAGAGCTGACACTAGCAAGTGCAGACCCCATGAGTCCTCTTCATCAG ATAGGTACTCTGATCTCACTGATGACTCGCTTTTGTTAGTCCAAGCCATGGAGCTCTCGGGACCCAGATGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0523300.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACATTATTAAATGTTTCAGACCGGCATCATGAAGAAGTCTACCTTGGAAACTTGAAGAGGTTCCCATTCAGAGAACT CCAGATTGCTACTCACAACTTCAGCAACAAGAATATACTGGGAAAAGGTGGTTTTGGAAATGTGTACAAAGGAGTTCTCT CAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATTGGAGGAGAGATTCAGTTTCAGACTGAAGTT GAAATGATCAGCCTGGCAGTGCACAGAAACCTCCTCAAACTGTATGGATTTTGCATGACACCAACAGAAAGGCTTCTAGT TTACCCCTACATGTCTAATGGCAGTGTTGCTTTGCGTCTGAAGGGTAAGCCAGTCTTGGATTGGGGCACAAGGAAACATA TTGCTTTAGGAGCTGCAAGGGGGCTACTCTACCTTCATGAGCAGTGTGATCCAAAGATAATCCACAGGGATGTCAAAGCT GCTAATATTTTGCTTGATGACTATTGTGAAGCTGTAGTTGGAGATTTTGGGCTAGCAAAGCTTTTGGATCACCAAGACTC TCATGTCACAACTGCAGTGAGGGGCACTGTGGGTCATATTGCCCCAGAGTATTTATCCACTGGTCAATCCTCTGAGAAGA CCGATGTCTTTGGATTTGGCATTCTCCTTCTTGAGTTAATCACAGGCCAAAGAGCTCTGGAATTTGGAAAAGCAGCTAAC CAGAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCTAGAAAAGAAGCTTGAGTTGCTGGTAGACAAGGATCTCAA GAGCAACTATGACCAGATTGAGCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGCACTCAATACCTCCCAGGCCACAGGC CAAAAATGTCTGAAGTGGTTCGCATGCTCGAAGGTGATGGTTTAGCGGAGAGATGGGAAGCTTCTCAGAGAGCTGACACT AGCAAGTGCAGACCCCATGAGTCCTCTTCATCAGATAGGTACTCTGATCTCACTGATGACTCGCTTTTGTTAGTCCAAGC CATGGAGCTCTCGGGACCCAGATGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0523300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTLLNVSDRHHEEVYLGNLKRFPFRELQIATHNFSNKNILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAIGGEIQFQTEV EMISLAVHRNLLKLYGFCMTPTERLLVYPYMSNGSVALRLKGKPVLDWGTRKHIALGAARGLLYLHEQCDPKIIHRDVKA ANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKAAN QKGAMLDWVKKIHLEKKLELLVDKDLKSNYDQIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRADT SKCRPHESSSSDRYSDLTDDSLLLVQAMELSGPR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.30.200.20
3 110 108 6.3E-37 –
PIRSF
PIRSF000654
5 317 313 2.1E-34 –
PANTHER
PTHR27001
8 331 324 2.2E-183 –
PANTHER
PTHR27001:SF613
8 331 324 2.2E-183 –
SUPERFAMILY
SSF56112
11 304 294 2.66E-76
IPR011009
SMART
SM00220
34 303 270 6.0E-35
IPR000719
ProSiteProfiles
PS50011
34 313 280 34.859
IPR000719
Pfam
PF00069
35 301 267 1.8E-44
IPR000719
ProSitePatterns
PS00107
40 62 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
111 323 213 3.6E-59 –
ProSitePatterns
PS00108
153 165 13 -
IPR008271
MobiDBLite
mobidb-lite
314 337 24 - –
MobiDBLite
mobidb-lite
314 334 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0523300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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