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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0526000 |
| Transcript ID | LotjaGi1g1v0526000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | En/Spm-like transposon protein; TAIR: AT3G30200.1 Plant transposase (Ptta/En/Spm family); Swiss-Prot: sp|Q9XEC1|Y4443_ARATH Probable transposase-like protein At4g04430; TrEMBL-Plants: tr|I3SWI3|I3SWI3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0526000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105279499..105284457) extracted from Lotus japonicus Gifu genome v1.2.
CTTCTCGAAGCCGCGCGAACCTCCATCGTTAGGGTTCCTCTTCATCTTGGTATGAGTTTACTTTTTGGCTCTCTTTACTC TCGCATCCTGCTCTCGCTCACTCTCTTCTCTTACAGGTCACGAATAGAAAGAGAAAAAGGTCGAGGAGGATGAGGATGAG GGATTCGATGATGTAAGTAAATCCTATTTCTTACAAATCCACTCTTGTGCTTGGAAACTCTGTGACTTGAAGTGTTGATT TGTAACTTGAACTGATACATAATTCTTGCTATTTGTGTGACTGGGGTCTTCTTGTTATAACTTGCCTTTCTTTTCATTCA AACACCATGTTTTGTTGGGGAGAAATTCAACATAAGAAAACTAGTGAAGAACACCTCTTGATTTGATTGACACTGCTTGT ATAAGACTTGACTTTTAGTTGGAAATTGTCTCTCAACAAGAGGTACAAAGTGTATCAAATAGTTTCTGGTTTCAAATTTA TTTCGCATCAATTTTGCCTTAGTGTGTCAAGGTACAACTAAGGCAAAATCAACCGCAAACCAAAACTAAACACCAAATTT GTGCATCTCAACGTCACACCAGGAAGTAAGTGTCTCTATGGGTTAACTTAACACATACCAGAATCATTATTAAGTTGGGC AATTGCCTTTACTCCCATGGTAGCTGCTTTATGGATTAGCAATTTAACACATATCACGGTTATTATTAAATTGGTCAACT AACCCTCACTCCCCTGATCATTAAATTCTATGGGCTAACACATAACTGAATCATTATTTAGTTTAGCAACCTGCCCTCCC TATCCTGAATAACAAACTCGGGTTAATACTGACCAGAAAAGTAAAGGGAAAAGTATGTGACATGGCCTTCTTTTCTCCAC TTTTTTATATAGGTTTGTAACATAGGTTTTACTTCTGATTTTTCTTCCTGTACTTTATTTTTGTCATATTGATTGAAGTG GTGATTGTGATTAATATCACTGGTACCTTATCTTCTTCATAATCTTTGTCCATTGTCATCACTTCTCACATACTCTTTTT TTTTTTGTTTTTGTGTATTTTTGTATTATAATAACAACTTGTGCTGAAAGTTAATGATTTGCCAATGAGAATTGCATAAT TTATGGTCTGGAAATTGTGTAGGAGCATGGGAAGAAGCAGAGTATAAGCAAAAGCATTCCAGAATATGATATTGCTATCG TTGGAGGTGGCATGGTTGGCATGGCTTTAGCTTGTTTCTTAGGTAGGTAATAATCTACTTGCAGATGGGTGTATCAGGCA TGTCTGAGTCTGAATTTTATTTTTTCTGGGCTGCAATATTATGCGGGCACCCCGTCGTCTTTAGAACTATCTTTAGCTAC TCATGTCTTCACCAGAGTTTAATCTTTTGTCTTTCTGGTCTGGTTTTTGCCCCTTCTCTCAGGTCAATATACCAAACAAT AGTTTCACTTTTCTTTAATTTGTTGTGACTGGTGAACTGATCTCTAATCCTAATCCTAAAAATGTTTGATAATCTGCTTC ATTATCATTACATGCTTTAAGTTGAATTTTGTGTACTTGGGTACTGTCCTTGGTCATTTTATATAGCCTTCTAAATGGGC AGCTTGGGCGTGTTCCAAACCACATCATGTGCTATGCTATGATGGTTGTGATCATCATTAATATCAAACTAAGCCGGAAG CTATAATGATTCAATATAACATATCAAACCAAGCAGGAACGAAATTTATCTATCTTCAATCATCCCGGCCGATCGCATGG AACTTGTAAGAGTCGGTATTTAAATGATATGGAATTACATGCTGCCCATTTGCATATCCTACTTAACTGTGACGAAGTTA AACCATATATAAAGTATGTAAGTTTATTTGTATTTTGATCATTCTTTTAGTCATAATGATTGAAACATTAAATAATATAG TGACCATTGTTAGATTCTTTGAGCAACACTTGGTGGCAACCTTTCCAAATATCTCTCAAGCTGATATTGATGGTCTTACT GCATCTGAGTTTCCAACTTGGTTTCGATCGTATGTAAGTGTCGTGTTCTTTTAAGTTAATATTGCACAAGTTAAACCTAT GTTTGTGTAATATAAATTCTAATGAGTTTATGCTTAATGATAGGTTCATGATAGAAATAACATGGTAATAGATCAGTTAT TACACCATTTAGCATGGGGTCCTAAGAAAAAGGTGGAGACTTGGCCTATTTACTTTGTCAATGGTTTTAAGTTTCATACA GAAGAGTGGACTTTCAATAAGAAAACCATCAATTCTGGAGTTTGTGTTGAGGGTGATGATGAAGAGGATGAACACTATTA TTATGGTGTCCTTAAAGAGATTTTGCGGCTAGAGTACCCAGGTGAACCAATCAAACAATTAGTGTTATTTAACTGTGAAT GGTTTGATTCTGTCATCAATCGTGGGATGAAGGTTAATAAAGAATATGACATTGTGGAGGTTCATCGTTCTAGAAGGTAT TCAAAATATGACCCTTTCATATTTGCAACAAATGCGATTCAAGTGTACTACATGCCTTACCCAAAACACATAAAAGAAAA AGTTGATTGGTGGGTTGTTACTAAAACCAAACCAATGGGTACAGTTGATGATCGGTATGCATTGGAGTTTGCATTTCAAG ATACAACAACTCATGTGGACCCGGTTTCAAATGAAGAGCTAGATGGTCACTTGAGAGATGATGAAGCTTTATATGAGGAA GTGGATGAGGATGAGGATGAGGATGAGGATGAGGATAAGGATGAGGATGAGGATGAGAATGAGAATGAGAATGAATATAC ATCTTCAAATGATGATAATTAGAATGTGGCATTATGTTTTTCTTATGTGAGGTAACAAATTGTACTTATTTTAATTGTAA TATTATAGCTCGTATAATTTTTCCTTAAATATACTAATGCTCTATCCTTTACAAATAATGCAGATGTCTGACAAAGATTG AGGCAAAACCAAAACTCTAAGAGGAAAATCATCTAAAAAGCATTCAAAGGGGCTAACTCACAATGGTATTCTAACTTCAG CTTCAACACATGTTGCAATGTCATCACATATGACAACTCATGTCCCACCAAGTCAATCAACTTCTTCTACATATGTCCCA CCAACTCAATCAACTCCTTCCACTAATGTCCCACCAACTCCTAATGTGGTACAAGATTGCACTAATGTCTCACCAACTCA ATCAACTCCTTCCACCAATGTACAAGATTCCACCAATGTCTCACCATCTGAAAATGGATCAAATGATTGCAAACCTACAT TCAACCTTGATGGAGAAGGGTATGCATTATTTTGTATAAGTTATTTTGAGTACTTTTAGTATACCTTTAATTGTTTACAT GTCGTGTTTTTAGGTTTTTACCTTCGCATCCTGCTGCTAATGCCATCACTGATATCTTTCGAAGTTATTATAATGAACCA TGGCCAACATGGAGGAAGATACCAGAAAATAGGAGAACTATGATGTTTGGAGAGTTCATGGTATATTTCAATGTAAATTA TCAAGTTTGATCTACTATCACTATGTATGCAATTTTATCTAACTTTACTTGTATTTATTGTAGAAGAAATACTCTGTTTG TCCACCTGATGCTATATGGGCTAGAAATAACTTTGAATCTCGAGGTCAAAAACTGATGAAAGATAGTTTGAGTAAGGCTC ATAGAGATCAGAAGAAGCCAAGGTGGCTTGGAGATCATGTATGGAATGGGCTATGTGATCATTGGGAAACTCCGAAGTTC AAGGAGAAAAGTGTCAAAGCAAAGGCAAATCGGGCATCTGATCGTGAAGGATTTGGAGGGACCCTTCACATTGGTGGCTC TATCACAACATCTCAACATAGAGACAATTTGGTTAAGATTCTTCTCTTGTAGTGTATTCTCTTAATTTAGATATAAATGA TATTGTCCTAATTTTTTGGTACTTGTTTTAGATGAAGAAAAATGGATTCAACCCTTCTCCACTAGACTTGTTTCGCTCTA CACATCAACGCAAGGATGGTACATTTGTGGACAAGAAATCAGAGCATGTAGATGTATGATATGCTAAACTCTTCTTTAAT TTAGTATACATGAATTGCATTGGACTAGTCTATAGGACAAATATTTATGGATTGGTTGGGCTCTTGTGACATTTTTAGTG TTTTTGTCTTTGTTTCTCATACAAGGTTGTGCTTGAAATTATGGTAAATGTAGGTTAGGTATTGTAAAAGAGAATTCATG GTTGATTTTATTGTAATTAATTCTTGCTAACAGGGTGCATATGTGCGTGAAATGGAAGATAGGACGCAAAGAGCATCTGA GCAAAATCTTCCTCCGCCAAGTGAGCTAGATGTGTGGCGTGATGTGGCTGGCATGAAAAAGGGTAGAATATATGGGTTGG GATTGGAGTCCACTGTTATCAATAAACAATATCATGGCTCATGTTCTTCATCATCTGAATGGGTAAGAAGATCAGAATTT GATCAATTGAGAAACACTATTATGGAGGAGACTCAAAGAATGGTAAAACAAATGATGGAAGAAAGGATGCAACAACCACC AATGCCAACCCCAAGAGGAGTTAGAAACTGATGAGTCAGAGAATGAGGAGGATCTTGGTGTTTTTCCATGAAAACTTTGT CAAGCTTTGTTTCTATATTTAATGTAATAGACTATGTTTAATGTAATAGTAATCTACTAGACTAGTTTAAGTAGTTCATG GTATACTTTTTGTGATGATTCAATGATGAATTTAGGTGGATATGTTAAGATTGTGTGTTTTGTGATGATTCAATGATGAT TATGGTTATATTCATATTTTTAACACTAAAAAAATCTGTCACAAAACTGATTATTTTTGTTAATTTTATATTTATTACCG TCACTGAACTCATCACTAACTTTTTAAATCTGTCGCTAATTCCGTCGCTATATTATAGCTGAAACCGTCGCTAATTCCG
CDS sequence (LotjaGi1g1v0526000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCATCACATATGACAACTCATGTCCCACCAAGTCAATCAACTTCTTCTACATATGTCCCACCAACTCAATCAACTCC TTCCACTAATGTCCCACCAACTCCTAATGTGGTACAAGATTGCACTAATGTCTCACCAACTCAATCAACTCCTTCCACCA ATGTACAAGATTCCACCAATGTCTCACCATCTGAAAATGGATCAAATGATTGCAAACCTACATTCAACCTTGATGGAGAA GGGTTTTTACCTTCGCATCCTGCTGCTAATGCCATCACTGATATCTTTCGAAGTTATTATAATGAACCATGGCCAACATG GAGGAAGATACCAGAAAATAGGAGAACTATGATGTTTGGAGAGTTCATGAAGAAATACTCTGTTTGTCCACCTGATGCTA TATGGGCTAGAAATAACTTTGAATCTCGAGGTCAAAAACTGATGAAAGATAGTTTGAGTAAGGCTCATAGAGATCAGAAG AAGCCAAGGTGGCTTGGAGATCATGTATGGAATGGGCTATGTGATCATTGGGAAACTCCGAAGTTCAAGGAGAAAAGTGT CAAAGCAAAGGCAAATCGGGCATCTGATCGTGAAGGATTTGGAGGGACCCTTCACATTGGTGGCTCTATCACAACATCTC AACATAGAGACAATTTGATGAAGAAAAATGGATTCAACCCTTCTCCACTAGACTTGTTTCGCTCTACACATCAACGCAAG GATGGTACATTTGTGGACAAGAAATCAGAGCATGTAGATGGTGCATATGTGCGTGAAATGGAAGATAGGACGCAAAGAGC ATCTGAGCAAAATCTTCCTCCGCCAAGTGAGCTAGATGTGTGGCGTGATGTGGCTGGCATGAAAAAGGGTAGAATATATG GGTTGGGATTGGAGTCCACTGTTATCAATAAACAATATCATGGCTCATGTTCTTCATCATCTGAATGGGTAAGAAGATCA GAATTTGATCAATTGAGAAACACTATTATGGAGGAGACTCAAAGAATGGTAAAACAAATGATGGAAGAAAGGATGCAACA ACCACCAATGCCAACCCCAAGAGGAGTTAGAAACTGA
Protein sequence (LotjaGi1g1v0526000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSHMTTHVPPSQSTSSTYVPPTQSTPSTNVPPTPNVVQDCTNVSPTQSTPSTNVQDSTNVSPSENGSNDCKPTFNLDGE GFLPSHPAANAITDIFRSYYNEPWPTWRKIPENRRTMMFGEFMKKYSVCPPDAIWARNNFESRGQKLMKDSLSKAHRDQK KPRWLGDHVWNGLCDHWETPKFKEKSVKAKANRASDREGFGGTLHIGGSITTSQHRDNLMKKNGFNPSPLDLFRSTHQRK DGTFVDKKSEHVDGAYVREMEDRTQRASEQNLPPPSELDVWRDVAGMKKGRIYGLGLESTVINKQYHGSCSSSSEWVRRS EFDQLRNTIMEETQRMVKQMMEERMQQPPMPTPRGVRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 75 | 75 | - | – | |
| MobiDBLite | 1 | 73 | 73 | - | – | |
| PANTHER | 25 | 242 | 218 | 1.3E-51 | – | |
| PANTHER | 25 | 242 | 218 | 1.3E-51 | – | |
| Pfam | 167 | 298 | 132 | 8.0E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0526000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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