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LotjaGi1g1v0532000.1

Overview

Field Value
Gene ID LotjaGi1g1v0532000
Transcript ID LotjaGi1g1v0532000.1
Lotus japonicus genome version Gifu v1.2
Description 4-sulfomuconolactone hydrolase; TAIR: AT2G35450.1 catalytic/ hydrolase; Swiss-Prot: sp|A6XIG6|SLMH_HYDIT 4-sulfomuconolactone hydrolase; TrEMBL-Plants: tr|I3T8F7|I3T8F7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0532000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:105905893..105911786) extracted from Lotus japonicus Gifu genome v1.2.

GTCAAGAAACACCACCTGAAATGGCTCTAAGGCTAAGTAGTGTGCTTTCATTTGTAGGTCCGAGACATTCGAGGAAACCT ACGTTGACCTGCAGAGCTCGTGCTGCTACAGTTACAATGGCCTTCAGTGTTGCTGCTGCTGGTGAAACTCCTTCAACCTC CAAAGTTATTGATTCACATCTGCACGTGTGGGCTTCCTCTCAAGAGGTAACATACAGCAAATTTTCACTCAGAGGGTTCT GTTAATTTTCTGTGAACAACACTTTACAATTACAATAATTGTATGTACTTTTTTACTACTAAATTTACTTCAGTTCATCA AACCTTAGCTGCAGAAATTTGGATATGGCTCCTTAGACTTAGAGTATAAAGGAAACTGCCATAAGCATTGATCTAAATCA TTGGTTGAGATAAAGACCACTATAATTTGTTATACATGTGCAAATATATTGTATATGATATCAATCAGAACTGTTGGAGA AGCCAAATCCCAGAAATTTATGTGCACAAGTGATGATTTTATTATGTTTATGATTTCATTTCATACCTTTGTGATTATAT TATAAGGTTGTTCATATACCAAGAATTATCCTTTCTTTTTTTTGGAAAATGAAGGCAGGTAAATTTCCATACTCTCCTGG ACAAGAGCCCACTTTACCAGGACATGTAGATTTTTTGCTCCAGGTATACATTTAGTTAATTGACTCACTGCCCGTGTTCA TTTTCAAAACTTTTTCTTTTCTTCTCTTGATATTCCATATGTGTCCATGCTTGCTGTTTCACACATATCCTAATTGCTTC TGGTTATTTACATGGAATCTTATTTTTGTTGGATTTGTGTTTATGTATCTATCATTGATGATGATACTCAATTTTCCCAG TGTATGGAGGAAGCAGGAGTAGATGGTGCACTCATTGTGCAGCCAATTAATCATAAGTTTGATCATAGTTATGTCACAAG GTATGATCCAGTGCTTTTATAGCTTTAAGACAATACTGAAAAGGGCATTTGGTGTTGATGGAATATCTAGTGGTAGTGTG ATATCAGCATTTGGCATGGTTTCCTGACTAGAATTACTGGGAAAGAAGAGAACAGGGTATGCGGAGAAAGATAAAGAGAG ATTTTGTTAACTCAATAATGCTAGTTAAGTTTGGACGCTATGGTACAATGAGATTTTTACATAAAAGTGGGAAAATAGCC TTTTTTTGGATAGGAAAAATGAAGAAAAGATCTCCAAAGTCTTGGAAAACTAACAATTAACCGTAGACCGGGTGAAATTA TATAACCTAGAATTCAGTTATTTAAAAAGCATAATCTGCCAGGTGTATCTTCATGTGATTATTCCAAATTATGGAGATCT GTCAACTGTTCTTTGTATCAAGGGAAGTTAGAGGTTCATATAGCTTCGTCCATTTTTAGAGAAGGATGGGGCGATCTATG ATTTAGTTGATGCTCATTGCATGTATCTAAGTTTTTATCTCTTAATTCAGAGAAGTTGAAGGTCAGTTTGTGAGCTTTGA TGACCATGAAGTTGAGTCAAGTAGTGTTTCTGGTTTACACAAAATGGGAAAATGATTGCATTTTATGTGGCATGGAGAAA TAGTTTTTATGTAGCAATTTTTTTAAGAGTAATTTTAATAAAAATACAATTTTCTAAAAATAATGTATGAGATGTGTGAT TTTTTAATGCACTTCATCTGATTAGTTACTATCATTATATTAGCCGCACAGTGAGTTGGATGGTCATACACTACAGAAGG AGCTTCTAGTTTGACTTAATTGTGCATTCATTGTACTCATTACAGTTTCCATACAATGGCTTCTTTTAATTTTTGTGATA TGTATGGTATTACTCATGTGAGTTTGTTCGTTGGACAGTGTATTGAAGAAATACCCCACCAAATTCATTGGTTGTTGTCT TGCTAATCCAGCTGATGATGGAAGCGGGCTTAAGCAGTTTGAACATCTTGTTTTGAAGGTACAATGATTAATTTCAAGAT ATCACATAGCTGATTTCTTTCGAAAGCAATTGAAGTTTTGTTTTCATTGATGTTAGGATGGTTATCGCGCTGTCCGCTTC AACCCTTATTTGTGGCCATCTGGGGAAAAGGTAGGCAGACCCTTTTCTTTTTCACGTGTCTATCTGGTCACGATATAAAC TGAAAAGATACGGATGAGTCATAATAAATGTAACTTGTGCTAGAGTTTATGTAATCCACTCTTAGAGCCAGTACGGATAC GGGCTAAAGAGCACTTATTGGAGCTTATCTACTAGAAAAAGCACTGGATAAGTTCCAATAAGTGCTCTTTGATCCGCATC CAAATGGAGTAACATTTTATACTATTGAGAAACAAGAAAGTGCCATATTATTCTAGACTTATAGTAAATGATTTTTCTTA CTTCTAGTAAAAGATACTGCTTTTTAGATATGTGGCATCATATGTTTCACTCTTAGTATACAATCTTTTTACATTGTATT GAATCAAAGTTAGGGTTTCAGACATAACAGAATAAAATGGCATCATTTTATCCATGTAGGAAACCTCATTTCATGGGCAA ATGCTTCTGTTGTTGTTCTTTTTGTTTATTGGATCAAAAATGATATATATTTTTCTGGATTATATTCAAACAATCTCATT GCAGATGACAAATGAAGTTGGGAAAGCACTTTTCCAAAAGGCTGGAGAACTTAATGTCCCTGTAGGCTTCATGTGCATGA AGGTGTTTTCAATTTCCTCGTGTAGCAAATACCCAAGAACTATTTTGCAAAGCTTCTTCTCCTCCCATTAACAGTTGTAG GAACATCTTTTTGGATATTATGTTGATCGATGAAACTATGAATTACTGAGCTGAATAATTTCAGGGGCTTGATCTCCATA TCTCTGAAATTGAACAACTTTGCACCGAGTTTCCATCTACAGTTGTATTGCTTGATCACTTGGCCTTCTGCAAGCCACCA GTGTAAGCTATATAATATGATCATTGTTACAAAGGCCAAGAAACGTACCCTTATTTGGATATTATATTGCAGAAATGATG ACGAAGCTCTTATCTTTTCTCGGCTTTTAAATCTATCAAGATTCCCTCAAGTAAGTGCCTGATTGTTTCTTCATGGTCAG AACTTCAAGGAGTAAAGCATGCTGAAATATTTTCATTAATGGATTTTACTATATTGCTAAAGACCTTTAGAGAAGCAGAA AACTAAAATTCTTTTAGATACTTGTTCTGTCTTTTTTAGCTAATGGCATCAACTGAAGGATTCTCATGTCAATTGAACTA GTAAATTGAATGTTTATGAGAGAAGAAGCAGAGTCTGTGGCAATACTGAAGACTTGCTCATACTAAACTTTGAAATTTTG ATAGGTATATGTGAAATTCAGTGCCCTTTTCAGAGTGTCAAGGGTTCAATTTCCTTATCTGGATTTGTCTCCTCTGTTAT ACCAAGTTGTCTCTAGCTTTGGTGCTAACCGTGTAATGTGGGGCAGGTACCTTCTTATCATACTTGTGTTCAACTAAAAT AGAACAACTAAACTTTGTGATGAAACAGTAGAATGGGGAAAAGGGTATAAGAATTTTGTCCATAAATAATCACATAAGCT TTTTTCAATCATGTTGTTGCAGCGATTTTCCATTTGTTGTTCCTGAATGTGACTACAAGGTTGCCAAAGAGGCTGTGCAT CTTATTGCCAATGATATCTCTTTGCCTTCATCTGATTTAGATTGGATTATGGGGAAAACGGTTGCACAACTATTCCAAAG CTAATTGACTTCTGCTAAGCAAGGTTTTCACTGAGAGTTGAAATGCTGTCTATTGGTTGTGCCTTATAGAACAATTTTAG ATGTTGCATTACAAATTTTATGTCTAAATGTATATCATTGTGTCACCATTGAAGATGTTTAATTGTCTACCTGTTCGCTT CTTTTTAGCACCATTGAGATATCGTTTTTGGCACATTTTTAGAAGTTGTATTATTAGTAGGGAATTGATAGTTATATCCA GATTCACCCCATCAGGTTAGGACTGTTCTAGTTTAAACATAAATTTTTGATTCAAGTTCTTTCGTAGCAAAATCTTCACC GTTTATAGTGATTCTATCCGAGCTATAGTGATTATAGCTGACTCGAACACTATTTGGTGGAGAAAACATGTGGTATAAAA AAAAACTTATGTATTCTTTTGAGCTTTAGGAATAAAAAAGCTTCAATTGTATCTTAGAAATTTATTTCTACATATAGAAG AGGCAATGAATTTCCAAAACTCATTGGCAAGCCACTTCGTTGGAGAATATCAACAACTTATAACTGAGTTCCATTGATCA CAACATGCACCAATTTCAAAGACAAAATCAATATTTCAAAAAAAAAAAAAGAACATAAGCAAGCCAAGATCACAAAATGA TAGAATCCTTTGAGGGAGGAGCAAAACTCAGCAGCATCCATTTTTAGGGTCATGATCTCTGTGTTTGGCATCAACATTTC TTCTCTTCTTCCTCCTCAACTTGTCACAAGCAAATGCTCTCTCCAACATCTCCACCCTTTGTGTTAGACAGCTAAGAAGC TTAGTCTGCTTCTCATTCTTCTCAAACAGCTGTGCCATCATCCCCATCATCTTCTCATTGTCCTGCATCATCCTCTTCAA CAACTCTCTGTTCTCACCCTCACAATCCTTCCCCTTTTCCTCCTCACACCCAACTTCTTCACCCTTCTCTTCTTCAACCA AACTTGTTCCCACACTCTCTTCTGCCACACCATCCTCCTCCTCCTTATTCACCAAAGCTTCAATTTCCTTCCCTTGTTCA TGCTCATCATACACAACTCCACCCTCATCTTCCTTCACCAAACAATTTTCCCCAAAACCCTCTTTCTCCTTTTCTTCCAC CTCCTTCATCTTCTCTTCCTCACTCAAAGTTCCAATAATTTTTCCTTCTTCATATTCCTCACATCCACCTTTACCCTCCT CTTCCTTCACCAAAGGATTCTCCTCTATCTTCTCTTCATCCCTCAAAGTTTCAATTTGTTGACCTTCCTCATGTTCCTCA CATCCACCTTGACCCTCCTCTTCCTTCACCAAACAACCCTCCTCAACTAACTTTTCTTCCACACTCTCTGCCCCCACACA ATTACCCTTCTCACCATCCTCTTCCTCCTCCTCCACATTCATCTTCTTCTCCTCCTCTACCTCCAAAGCTTCAAATTTTC CACCTGCAGAATCAGTCACCGCCATCATCTCAGAAGAATCAGCAATAGAATCACCAGTACCCTCAATTTGATCAACCATT TCTTGAAGGGCAATGGCTCTTTTGATAAGAGACTTTCTACAATCCCTCAAAGCAGAGCAATGCAGAACCTTAACAGAGTC CAACCTGAGAAGCAAATTCATAATGCTCTCACCGACCCTCACCCTCTCTTTTTTCTCCTTCCTCATCTTCTCCACCGTTT CAGGAGCATGAACATTAGTCTCAATCTGCTCCAACTCCACCTTCATTGCTACCATCTTCTTCACGCTCTTCCTCACCAGG TACCCTCTCAGAACCTTCTGGATCTTTGTAGCAGAGTCTGCTCTGTTTCGCTCTGACCCAACGAAGTGCACAGGTATCTG CCTCACTCTCACCTTGGAGGGTGCCCTTTGGCGAGGTTGAGGTTGTGGCATGCCCCAGAACGGTGTCTTGCTCTTGTTCA TCTGCATAATAAGGATTGGTTTTCTGAGATTTTTTGAGAATGTGAATGATGTTGTCGGAAATGTAGATGTTTTTGTGGAG ATTAAGGTTGTGGATTGAGGAGATTTATATAGGAAGTTGGAACATGAATTGAGAAAGTTCGAGAAGTTTCAGGAAAATAG AGGAATGAATGAGATTAACTGCTTGCTTACGTGGAATGTTTCATTGTGTTATTC
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0532000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCTAAGGCTAAGTAGTGTGCTTTCATTTGTAGGTCCGAGACATTCGAGGAAACCTACGTTGACCTGCAGAGCTCG TGCTGCTACAGTTACAATGGCCTTCAGTGTTGCTGCTGCTGGTGAAACTCCTTCAACCTCCAAAGTTATTGATTCACATC TGCACGTGTGGGCTTCCTCTCAAGAGGCAGGTAAATTTCCATACTCTCCTGGACAAGAGCCCACTTTACCAGGACATGTA GATTTTTTGCTCCAGTGTATGGAGGAAGCAGGAGTAGATGGTGCACTCATTGTGCAGCCAATTAATCATAAGTTTGATCA TAGTTATGTCACAAGTGTATTGAAGAAATACCCCACCAAATTCATTGGTTGTTGTCTTGCTAATCCAGCTGATGATGGAA GCGGGCTTAAGCAGTTTGAACATCTTGTTTTGAAGGATGGTTATCGCGCTGTCCGCTTCAACCCTTATTTGTGGCCATCT GGGGAAAAGATGACAAATGAAGTTGGGAAAGCACTTTTCCAAAAGGCTGGAGAACTTAATGTCCCTGTAGGCTTCATGTG CATGAAGGGGCTTGATCTCCATATCTCTGAAATTGAACAACTTTGCACCGAGTTTCCATCTACAGTTGTATTGCTTGATC ACTTGGCCTTCTGCAAGCCACCAGTAAATGATGACGAAGCTCTTATCTTTTCTCGGCTTTTAAATCTATCAAGATTCCCT CAAGTATATGTGAAATTCAGTGCCCTTTTCAGAGTGTCAAGGGTTCAATTTCCTTATCTGGATTTGTCTCCTCTGTTATA CCAAGTTGTCTCTAGCTTTGGTGCTAACCGTGTAATGTGGGGCAGCGATTTTCCATTTGTTGTTCCTGAATGTGACTACA AGGTTGCCAAAGAGGCTGTGCATCTTATTGCCAATGATATCTCTTTGCCTTCATCTGATTTAGATTGGATTATGGGGAAA ACGGTTGCACAACTATTCCAAAGCTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0532000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALRLSSVLSFVGPRHSRKPTLTCRARAATVTMAFSVAAAGETPSTSKVIDSHLHVWASSQEAGKFPYSPGQEPTLPGHV DFLLQCMEEAGVDGALIVQPINHKFDHSYVTSVLKKYPTKFIGCCLANPADDGSGLKQFEHLVLKDGYRAVRFNPYLWPS GEKMTNEVGKALFQKAGELNVPVGFMCMKGLDLHISEIEQLCTEFPSTVVLLDHLAFCKPPVNDDEALIFSRLLNLSRFP QVYVKFSALFRVSRVQFPYLDLSPLLYQVVSSFGANRVMWGSDFPFVVPECDYKVAKEAVHLIANDISLPSSDLDWIMGK TVAQLFQS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
SIGNAL_PEPTIDE_N_REGION
1 4 4 - –
Phobius
SIGNAL_PEPTIDE
1 17 17 - –
SignalP_GRAM_POSITIVE
SignalP-TM
1 28 28 - –
Phobius
SIGNAL_PEPTIDE_H_REGION
5 12 8 - –
Phobius
SIGNAL_PEPTIDE_C_REGION
13 17 5 - –
Phobius
NON_CYTOPLASMIC_DOMAIN
18 328 311 - –
Gene3D
G3DSA:3.20.20.140
29 328 300 1.0E-54 –
PANTHER
PTHR21240:SF19
46 327 282 8.8E-109 –
PANTHER
PTHR21240
46 327 282 8.8E-109
IPR032465
SUPERFAMILY
SSF51556
49 326 278 5.61E-47
IPR032466
Pfam
PF04909
50 326 277 6.7E-26
IPR006680

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016787
Molecular function Hydrolase activity Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
Subterm of
GO:0016831
Molecular function Carboxy-lyase activity Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0532000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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