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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0539600 |
| Transcript ID | LotjaGi1g1v0539600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|G7KZZ9|G7KZZ9_MEDTR Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0539600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106813261..106817476) extracted from Lotus japonicus Gifu genome v1.2.
TTCGATCATTCAACCTTGCCACTTGCCTCATTTAAGTTTTTGAACTTAGTCACATTGGTTAGATTAGGTAGCACATCAAA ATCAAATTCCGAAGACTAGAAAAAAAAAATGAGAAGATGCATATGATTTTCCTACTACTAAAAATGGAACAACCAGCTCA CACTCACTCACTACATTGAAGATAGATAGCAAATGCAGCACACAACAGAGGAATGGAAACAAATCAAACATCAAAATAAA AAGCCACTCACTCACTTGCATTTCAACCCAATTCTGCTATCTGATTTCACTCTCCCTCAGCCTCTCCAGATCACTCGGTT CTCAAGTAAGTTTTTTCTATCTTCCTCTTTCTTTGTTGATGTCTATGATTCTATGTGTAAGAATGAGAAATTTGTGGGGG AGTTTCTAGGTCTGGAGAGAGTGGAGGAAGAAAGGAAAGGAAACATTTTTTAGATGAAGGTTTTGATGTTTATCACTATG TTCATAATCATTCACATGCTTATACAAAATAACAAATCCTAGCTAGCAGAAAACATGAAAATCATTCACATGCATATACA AAATGCCAGCTTGAATTGTTTCCTAATCATTCACATGCTTATAATTTGGTTATTACTACCTCAACACCTCTATTTACAAC ACTTCTGTCTGTAAAACTCTTCAAAGGCTTGGATGCCACTGCCCACCCGTAAATATGTCTGTAAAGAAACATAAAAATTA TTAGTATATTGTAATTGATGTCATATAATTTTGATTTTTTTCTTTAGTGTTTTTATTTCATTATGTTATTAGATTATGAA GAGAGTAATGGCTTGGGCTCTTCAATATGCTATTTGTCATTCTAACTCTCTGAATTTATTTCTTCTACAGAACAGTGTTC AGTTCAGTCATTTGAGAAAGAATGGCTAAAAAGTATGAGGGACCTGCAATAGGAATTGATTTAGGCACCACCTACTCATG TGTTGCTATATGGGAAGAACAGAACAATCGAGCTGAAATCATTCACAATGAACAAGGAAATAGAACCATGCCTTCCTTGG TTGCTTTCACTGATACCCAAAGATTGATTGGTGATGCTGCTAAAAATCAGGCTGCAACAAACCCGTCAAACACTGTCTTT GGTAATTGATTTTCTTTTATTTTGTGTATTTATTTGATTCATGGTTCTATGCTTTATCATAACAAAACAAATTATACATC AATATTGCTTTTACTTTTGCAGATGCAAAGAGGTTGATTGGAAGGAAATACAGTGATTCAGTTGTTAAGGATGATGTTAA GCTCTGGCCTTTTCAGGTCATTGCTGGAACTGATGACAAACCCACTATTGTTGTTAGGTACAAGGGTGAGGAAAAATAAC TTATTCCTGAGGAAATATCATCCATGGTTCTCTCAAAGATGAAGGAGATTGCTGAGGCATTTTTGGTGTCCCCAGTGAAG AATGCAGTTATCACTGTGCCTGCTTATTTCAGTGACTCTCAGCGAAAAGCCACCAAAGATGCTGGTTCCATTGCTGGCCT CGATGTTATGCGGATAATCAATGAACCAACCGCTGCAGGTCTTGCATATGGCCTTCAGAAGAAATCCAGTTTTCCTGGAA AGCGAAATGTGTTCATCTTTGATCTCGGTGGGGGCACTTTTGATGTGTCTATTCTCACTATAAAAGATGATAATTTCAAA GTTAAGGCCACTGCTGGTGACACTCACCTTGGAGGAGAGGATTTTGACAGCAGAATGGTGGACCATTTTGTTAAGGAGTT TAAGAGGAAGCACAAGAAGGACATCGGTGGGAACCCAAGAGCCTTAAGGAGGTTGAGAAGTGCGTGTGAGAAGGCAAAGA GGACACTCTCATTTGCCACTGATACCACAATTGAGGTAGATGCTTTATTTGAGAGCACTGACTTGTGTTCAACGATAACT CGCACCAGATTTGAGGAACTGAACATTGATCTCTTCAAGATGTGTATGGAGACAGTTGAGAGGTGTCTTGAAGACTCTAA GATGGACAAGAGTGAAATAGATGATGTTGTTCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAACAGCTATTGCAGG ATTTTTTCAATGGGAAGGAACTATGCAAGGGGATTAATCCTGATGAGGCTGTTGCTTATGGCGCAGCTGTGCAAGCTGCT TTGTTGACTGAAGAAGGCATTAAGAATGTTCCAAACTTGGTGTTGATGGATGTTGCACCCCTGTCTTTAGGGTGGGCGTT AATAAGAGATGAAATGAGTGTAGTGATTCCTAGGAATACTACTATTCCGGTAAAGAAGACACAACGATACGCTACTGTTA AAGATAACCAATCTGGTGTCTTGATTGAGGTTTATGAGGGTGAGAGAGCAAGAGCCAGTGATAACAATTTGTTAGGCTCT TTTATTCTTTCTGGACTCCCTCTTGTTCCTCGTGGCTATCCTTTTAATGTATGCTTTGCTATAGATGAAAATGGGATTCT AACTGTTTCTGCTGAGGAAAAAACCTCTGGTAGTAAGAATCAGACAACCATAACCAATAAAACAAACAGGCTGTCAGCTA AAGAAATCAAAAGATTGATTCAAGAAGCTGAGATTTACAAGGTTGATGATATGAAGTTCAAGAACAAGGTGAAAGCAATG AATGCTCTAGATGATTACCTTTACAATATGAATAAACGCATGAAAGATAAGTGTGTCAGCTCTAAGCTTCCCCCAATGGT CCAAGTTGATATCAATTCAGCTATTGTAAAGGGCCAAAATTTGCTTGATGGTGGCCAGAAGCCAGAGACGTTTGTGTTTG TTGACTTATTAAGGGAGCTTAAGAGCATATTTGAACCTGCGATGGCCAAGATCGACAATGGTTGGACTCATGAGGATAGG GATGAGGATCATGGAAGCACTACTGGGCCTGCCCAATCAATTGCTACTTCAACCAGGCGCAAGTTGAAGGAGAAGCTTAG TTGGTTTAATAAATCTTCTTGAATTGCTTTTAATGTTTTTAGGTAACATTCCAGAATATTTCACTTAATAGGATCAAACT ACCTCTAGGGCTATATGCTTATTTGGAGGAATAGTTCTATTAGAATAAAGTTGTAGCATTTGGTAGGTTTGTTTACGAAA CGAATACCAATTGATAGGTTAGAGCCACTAAGAACAATTGGTGAGTACAGTTATTTATATGCTTCAAGGCTGCTACTAAG TACAGTTAATCAAGTTTTAAATTATCCTTTCCTGATGCAGTGTGTCAAATATATAAGTTTGTTATTGTTAGTGGTTGCTT AGTCTTGGAGATAATGGTTAGTGGCCTAAATTAAGGAGAACCACTCTTCTGTTTTTGTAGTTTTGCTTTGCATTTATAGA TTTAACAGATTGCAAATGAACTGAATGTAGAATTCCTTTGCTGCAATTGTATTTTTCTTCTCTTTGCACTCCGTTCAGAC CACAGACTCTTTAATTCTCTGCAAAAATAACTAACATTCAATAGGAGAAATACATGCTGAGTTATTAAAGTTGATTTTTC ATTTTTGCTCCATCATAAAATGGCCCTAACAAAATTTGGTCTGTGAAAACATAAAAGCTAATTGAACAGATGAAACATAT ACATGACATTAAAATATTACACAGTACTTGTTAAACATGACATGAGGAACTCAAAATAAAAACAGTTTAAGCCGATGAAA TATGATATTAAAATATTACAGTACTTGTTAAACTTGTTAAATATCAAGTTTGAGTAGCTTAGTACTTAAGCAACAACTCT GTTGCACTCCCTTTCAACAGCTCTCTTCAGGATGCTGTCTTCTTCAAGGACCATCTGAACTGGCAAGAAACCCATTCCAT CTGCCATGGCAAGCATCATCTCCCTAGTTTCCATCTTGAACTCTTCTAGATCAACTGAGCCATTCAAGTTGTGGTCGAAT TGGATGAACAATGACTCGTAAACACGAGCAAGCTCATCAGGGTTAGGCTCGACATCAATACCATAGTGGGTTTCCAGAAC CCTCAGGCTCTGGAGCTCCTTCAGCATCTCCTCATAGGAGAGAAGACCGTCGTTGTTTGTGTCAAGGAGAGCGAACCGGT CGCATACCGAGATATCAAATGCTTCTTCATCCTCAAGGAAGTTGACAATGGTGGCACCATCCAATATTTCTACACTCATC TTTCTTTTCTACTTGATTTCAAATGGAGGAAGGTGGTTTTTATGAAAAAAAAAGAG
CDS sequence (LotjaGi1g1v0539600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTCTCAAAGATGAAGGAGATTGCTGAGGCATTTTTGGTGTCCCCAGTGAAGAATGCAGTTATCACTGTGCCTGC TTATTTCAGTGACTCTCAGCGAAAAGCCACCAAAGATGCTGGTTCCATTGCTGGCCTCGATGTTATGCGGATAATCAATG AACCAACCGCTGCAGGTCTTGCATATGGCCTTCAGAAGAAATCCAGTTTTCCTGGAAAGCGAAATGTGTTCATCTTTGAT CTCGGTGGGGGCACTTTTGATGTGTCTATTCTCACTATAAAAGATGATAATTTCAAAGTTAAGGCCACTGCTGGTGACAC TCACCTTGGAGGAGAGGATTTTGACAGCAGAATGGTGGACCATTTTGTTAAGGAGTTTAAGAGGAAGCACAAGAAGGACA TCGGTGGGAACCCAAGAGCCTTAAGGAGGTTGAGAAGTGCGTGTGAGAAGGCAAAGAGGACACTCTCATTTGCCACTGAT ACCACAATTGAGGTAGATGCTTTATTTGAGAGCACTGACTTGTGTTCAACGATAACTCGCACCAGATTTGAGGAACTGAA CATTGATCTCTTCAAGATGTGTATGGAGACAGTTGAGAGGTGTCTTGAAGACTCTAAGATGGACAAGAGTGAAATAGATG ATGTTGTTCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAACAGCTATTGCAGGATTTTTTCAATGGGAAGGAACTA TGCAAGGGGATTAATCCTGATGAGGCTGTTGCTTATGGCGCAGCTGTGCAAGCTGCTTTGTTGACTGAAGAAGGCATTAA GAATGTTCCAAACTTGGTGTTGATGGATGTTGCACCCCTGTCTTTAGGGTGGGCGTTAATAAGAGATGAAATGAGTGTAG TGATTCCTAGGAATACTACTATTCCGGTAAAGAAGACACAACGATACGCTACTGTTAAAGATAACCAATCTGGTGTCTTG ATTGAGGTTTATGAGGGTGAGAGAGCAAGAGCCAGTGATAACAATTTGTTAGGCTCTTTTATTCTTTCTGGACTCCCTCT TGTTCCTCGTGGCTATCCTTTTAATGTATGCTTTGCTATAGATGAAAATGGGATTCTAACTGTTTCTGCTGAGGAAAAAA CCTCTGGTAGTAAGAATCAGACAACCATAACCAATAAAACAAACAGGCTGTCAGCTAAAGAAATCAAAAGATTGATTCAA GAAGCTGAGATTTACAAGGTTGATGATATGAAGTTCAAGAACAAGGTGAAAGCAATGAATGCTCTAGATGATTACCTTTA CAATATGAATAAACGCATGAAAGATAAGTGTGTCAGCTCTAAGCTTCCCCCAATGGTCCAAGTTGATATCAATTCAGCTA TTGTAAAGGGCCAAAATTTGCTTGATGGTGGCCAGAAGCCAGAGACGTTTGTGTTTGTTGACTTATTAAGGGAGCTTAAG AGCATATTTGAACCTGCGATGGCCAAGATCGACAATGGTTGGACTCATGAGGATAGGGATGAGGATCATGGAAGCACTAC TGGGCCTGCCCAATCAATTGCTACTTCAACCAGGCGCAAGTTGAAGGAGAAGCTTAGTTGGTTTAATAAATCTTCTTGA
Protein sequence (LotjaGi1g1v0539600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLSKMKEIAEAFLVSPVKNAVITVPAYFSDSQRKATKDAGSIAGLDVMRIINEPTAAGLAYGLQKKSSFPGKRNVFIFD LGGGTFDVSILTIKDDNFKVKATAGDTHLGGEDFDSRMVDHFVKEFKRKHKKDIGGNPRALRRLRSACEKAKRTLSFATD TTIEVDALFESTDLCSTITRTRFEELNIDLFKMCMETVERCLEDSKMDKSEIDDVVLVGGSSRIPKVQQLLQDFFNGKEL CKGINPDEAVAYGAAVQAALLTEEGIKNVPNLVLMDVAPLSLGWALIRDEMSVVIPRNTTIPVKKTQRYATVKDNQSGVL IEVYEGERARASDNNLLGSFILSGLPLVPRGYPFNVCFAIDENGILTVSAEEKTSGSKNQTTITNKTNRLSAKEIKRLIQ EAEIYKVDDMKFKNKVKAMNALDDYLYNMNKRMKDKCVSSKLPPMVQVDINSAIVKGQNLLDGGQKPETFVFVDLLRELK SIFEPAMAKIDNGWTHEDRDEDHGSTTGPAQSIATSTRRKLKEKLSWFNKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 66 | 66 | 7.12E-22 | ||
| Gene3D | 1 | 257 | 257 | 3.4E-115 | – | |
| PANTHER | 1 | 499 | 499 | 5.5E-226 | – | |
| Pfam | 1 | 463 | 463 | 1.8E-167 | ||
| PANTHER | 1 | 499 | 499 | 5.5E-226 | ||
| PRINTS | 21 | 41 | 21 | 3.5E-45 | – | |
| Gene3D | 67 | 246 | 180 | 3.4E-115 | – | |
| SUPERFAMILY | 73 | 261 | 189 | 5.31E-63 | ||
| ProSitePatterns | 78 | 91 | 14 | - | ||
| PRINTS | 84 | 94 | 11 | 3.5E-45 | – | |
| Gene3D | 110 | 187 | 78 | 3.4E-115 | – | |
| Coils | 141 | 161 | 21 | - | – | |
| PRINTS | 212 | 228 | 17 | 3.5E-45 | – | |
| ProSitePatterns | 215 | 229 | 15 | - | ||
| PRINTS | 244 | 264 | 21 | 3.5E-45 | – | |
| Gene3D | 258 | 387 | 130 | 2.1E-45 | ||
| SUPERFAMILY | 268 | 423 | 156 | 4.45E-47 | ||
| PRINTS | 271 | 290 | 20 | 3.5E-45 | – | |
| PRINTS | 351 | 367 | 17 | 3.5E-45 | – | |
| Gene3D | 390 | 493 | 104 | 1.1E-17 | ||
| SUPERFAMILY | 418 | 493 | 76 | 3.3E-5 | ||
| MobiDBLite | 494 | 517 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0539600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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