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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0540000 |
| Transcript ID | LotjaGi1g1v0540000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|Q9LHA8|MD37C_ARATH Probable mediator of RNA polymerase II transcription subunit 37c; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0540000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106870005..106876263) extracted from Lotus japonicus Gifu genome v1.2.
ATGTAGCACGGCTAGAAGTCAAAACCTGTTTTCCGAGATAAAGAGGCTCGCAGGTTTTTAATCTTTAATGCATTTACTTC GATCACAAAACCTGTTTTCCGAGATTATGTATGCCATTTCAATTTCAAATTTCAATTTCAAAAAAAAAATGTATGCCATT TCTTTCTGCACTTTATATCTTCCAAACCCTTAACTCATTTCTTTTGATCACAAACACAAATTTGGTTAGCCTGAAAGAAT GACAGAAAAATATGCAGCATGCGCCATAGGAATTGACCTTGGTACCACTTATTCATGCGTTGGAGTGTGGCAGGAGCAAC AAGATAGAGTGGAGATTATCCACAATGACCAAGGCAACAATACCACACCTTCTTTTGTTGCCTTCACAGATAAACAAAGG TTGATTGGGGAAGCTGCTAAAAATCAAGCTGCTACCAATCCAGACAACACTGTTTTTGGTAACTTTTTTCCTAAACTTTC CTTTCTGCCTACCTTGTGTATGATGAAATGACTAATTAAAATTATTACCAATTTTTGCAGATGCTAAGAGGTTAATTGGA AGGAAATTTAGTGACCCCATTATTCAAAAAGATATTTTATTGTGGCCCTTCAAAGTCATTGGCGATGTTAATGACAAACC CATGATTGTCGTTAGCTACAAAGGCCAAGAGAAGGAACTTTCAGCGGAGGAAATTTCATCTATGGTTCTCATAAAGATGA AGGAGATTGCAGAGGCATTTTTGGAGGCACCTGTGAAGAATGCAGTTGTCACTGTTCCTGCTTATTTTAATGACTCGCAG AGAAAAGCCACCAAGGATGCCGGTGCCATTGCTGGCCTCAATGTTATTCGTATAATCAATGAACCAACTGCTGCAGCTAT TGCATATGGCCTTGAAAACAGAACACGTTGTGTTGGAGAAAGAAATGTTTTTGTGTTTGACCTTGGTGGGGGTACTTTTG ATGTGTCTCTGGTTACAATTAAGGATAACGTCTTTGAAGTTAAGGCCACTTCTGGAAACACTCACCTTGGGGGAGAGGAC TTTGATAATAGAATGGTAGAATATTTGGCAAGGGAGTTCAAGAAGAAGCACAAAATGGACATCAAGGGGAATGCAAAAGC TCTGAGGAAGTTGAGAAAAGCATGTGAGAGGGCGAAAAGGACACTCAGTTTTGCTGTTGATACCACCATTGAGGTAGACG CTTTATTCGAGGGAATAGACTTTAGTTTTCCAATCTCTCGTGGGAGGTTTGAGAAGATCAACATGGATCTATTTGAGGAG TGTATGGAGACTGTGGAGAGGTGTCTTACTGATGCTAAGATGAAGAAGAGTAGTGTGGATGATGTCGTTCTTATTGGTGG TTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTACAAGATTTCTTCAATGGGATGGAATTGTGTAGGAGCATTAACCCTG ATGAGGCTGTTGCATGTGGTGCAGCCGTCCAGGCTGCTTTGTTGAGCGAGGGCGTTAAGAATGTTCCAAAGATAGCTCTT TCGGATGTTACACCTCTTTCACTAGGTATTGCAGAAGAAGGAGATCTCATGAGTGTTGTGATTCCTAGGAACACTACCAT TCCTGTGAAGAAAACAGAAGAATACGTTACAATTTATGATGACCAATCCAGCCTTTTAGTCGAGGTTTATGAGGGTGAGA GATCAAGAGCCAGTTATAACAATTTGTTGGGTTATTTTTATCTTACTGGCATTACTCCCGCTCCTCGTGGTCATCCTCAT GATGTATGCTTCGCTATTGATGAAAATGGTATCCTCACTGTTTCTGCTAAGGAAAAAACTAATGGCAATATGAATGAGAT TACCATAACCAATGACACAGGAAGACTGTCACCCGAAAAAATCAGAAGATTGATTGAAGAAGCTGAGAATTACAAGGCAG AAGATATGAAGTTCAAAAAGAAGGTTAAAGTAATGAAGGACATGGAGGATTACCTTTATGATATGAAAAAGCTTGTTACG GATAAGGGTGTCAGTTCTAAGCTTTCTACAGTGGACCAAGTTAAGATCAATTCAGCTATTGTAAAGGGAAAAATATTGCT TGGTGGTGACCAGCAGGAAGATACGTTTGTATTTGTGAACATGTTAAGAGAGCTTAAGAGCATATTTGAACCTGCAATGG CCAAGATTAATAATGGTTGGACTAATGAGGAAAGTGATAATGATTGATAAAATTTAGTTATTTGCATTGCATTAATCAAT TTCAGCTTTTCATTTTAAATATTGGAGTTGCTTGTTTTGCTTGTTTGATTACTATAATGGGAACATACTTCTTTTTGTTA GTAGTATTTTCAGTTTCAATCACACTAGGCATGAAGCAAACAGAAATCTATGACAGCTTTTATCATAAATATTTTAATTA TAGCAATTTGTATTCTGTGATTGACCATTCAAAATTGGTATGCTTAATTGATGTATATAATTCATGCTCTGTAACTAAAA TTGTTCATAGAATTGACTATTGACTTCTACTGCAAGATGCTTGCTGTCTGAGTTAAGGTCTTAGCTTGTAGTTTTTCACT TCCTTTTCTGTTAAGTGTTCATAACTACCTTAGCTGAATGAGTTGTCAAAGATTTGGGTTGTGAATTCATATTTGATGGT CCATGCACTGAATCAATTGATACAAGTGTTAAGTTTGTACCTAAAATTCTGTTACTTTTGACATTCCTGCATCTTGAGTC ACAGTTCTACCAAGAAACAAATACTGGTTGATATGACTGCAATGGTAATAATGATGTTGCTGCCAAGACTCAAAAACCCG TGATGTTGAAATTCTGAATTTTCTCTCCAAGTTCAAAACAACAATTTTTTTTGGGTGTGTAACAAGTTCTGTTTTTAAAT TAGTAGATTTTCATACTGGTGAGTTTTCCTTTTCATTTTTTACATTTGACTAATTTTTTTCTACTGTAGGATCACTTTGT GGAATGTCAAAAAATGGCTATAAATCTGAATAACATTGGTTAAATATTGTCTTGCAGATATCCACTTACATGATCCTTGC TATTCCAAGCAATGCATCTGATAAATTGTCTCTCAGGTCAAGAACTTAGAGAAGAAGCATATAATTAGGCTCTCCAGGTG TGCTTACTTCTCGTTACCATATGCTATTATTCTCTTCTCAAATTTGAGGTTTCACTCTTCATCAAGAATTAGTTCAAACT TGTCTAAATGGACCTCATGTACGACTACGTTACTCTAGCTGATATCAATTTTCCGGACTCTGAATTAGTGATAGGAGAAT ACTAAAAAGCATGTCTTAGAACTGAATAAATTGCCTACGAGATTATGGTTTCCTTACTGCTAAAACTGCCTAAGAGATTC TGGGGTCCTTACTAGGTAGTTTGCTTATGATTTTGCTCCCTCCATTCCAAAAGTTTTGTTTCACTTATTTTCCAAAAGTC GTTGTTTTAGAAGTGAAGACTATTATACTACCATATCCTTATTTAATATTATATGCCTCACATATCATCATATTTTCACC TATCACAATCTTCACTAATTATCTAACCAATAACTATCATTCTTTTTAAAAAATAAAAAAAAAGAAACTGCGCGCTCTCT TTTTTTTTTGGTACCCCCAACTTTGCAAGAAAATCTACTGGCATGTTCCCCTCACGAGACAAATGCTCCAACAAAATCTC CCACTGCAATTGCAACAACCCTTTGTTGCAGCAATGATCGATGCAAAATGATGCCAAGGGGGGAACCACATCTCTGACTA GCTGGATCACTAACAAGGAGTGCGAAGAAATTGCCACTCACTGATATCCCTACTGCCAACAAAGGTGCAAGTCATGGAAA GTTGCTAACAATTCACCATTGGAGCCCAAAAAACTAAGGATCCAGCCACCACCACAGTCCCCGAGTAAACCCCTAAACCT AGCCTAGCCAGGATTACCAAGGGAGCATTTGTCCACATTCAACACAACCCAACCCAACAGTGGTCTCGACCAAGCGATCC ACCAGGGTGAAGAAGACTGAGAAGCCTGGGATAAGGTGTTGGGAATGAAGGATAGTCTGCTACTCACCTTATGCATCATC GTACCGATAGGATGACCTTGCCCTTGGAACACCACCTTACAACGGTTCTTCCAAAGCTCCCACACCATCAGCGCAAAATG ATCTCGAGCTTGGGGCGGAACACGACCATGGCCAGGGCCCAATAATCTGTTGAAACATTGAACTCAGAAGACAACAAACC CACCTACTTCCAAATCCGCCCCAAAGTTGGACAATCCCGCAAGCAATGTAACAGGGACCGACAACAATCTGCACAAGCTA CAAATTGCCGAGCTAAATAAACCCCGATGATGAAGCACAAGCAATGGCACCATGGCAAGCTTGCCGAAGGAAGAAACAGA AAATCTCTGGAACCTGCAACTTCCAAATCCAATACCACACCCGGATCAAGAAGGAGAGAAACCTGCCCACGCAACCAACC ATAACAACTCTTCACTAAAAAATATCCACACTGGCTATGGCCCCAAGCAACAACATCCTCCACATCTAGGCCCGACACAA AAAATAAAGAGGCAAGGTAGGATCACACATCATCAGAGAATATAAAAAAAAGCATATATAGTTAATGTTACCACTCACCA ACACATCACACAACCTCAAATCTACATCAGAGATGTGCTCGAAGTCCACCAACTTACGAAGCACACCAAGATCACACCAC CTCTTATACCAAAAGGAAACATGACCTCTACCAACACGAAAAACAAGTCTAGGACCAATGAGAGCCCAAGTCTTAAATAT CGAACGAGCAAATATTGAACCTGTCGACGAAGACGCAACCCCAAAATCCGCAACCGAGGGATACACCGCACGAGATAACC TCACCTAAAGCTTCTTCTCGGAATGAAGCAAATTACAAACCTCTTTACTAAGGAGCGCAACATTTCTCCTCCTAGAAGTT CTGACACCATATGAACTCCTCGCCTATCATTGTTGCTCCAAAGAAAACGTCGAGCAATATAGTCCAACATGTTACACATA GATCTTGAAAACCACAGGATCTGCATATCATGAGTAGGAATAGAAGACAAGACTGGATTAATCAAGGTTATGTGCCCCGC TTTGCTAAGGTTCCATGACGCAAGATGCCTAGCCAGTAGCCACTTGATCAACAATGAAATCAAAATGTTTTCACTTTTAA CGGCCACAAATAACAGATTACCCAAGGTACTTCTGAAATTTGAAGAAAATGGGATTGCAGTGATGGCTAGAATACTATAT ATCTTTGCTTGGGAGACTAAAGGAGAAACCAAAGCCCAAAAATTGTCCAAGTTGACTCTCAAACCAGAAGCCCGACAAAA TAGATTCAGCACACCATGAACAACCCTAGCTTGAGATACTTTGACTTTGGAGAACAACAACAATCATCGACGAAAAAAAG TTGTGAAATCGCGGGCCCATTCCAGGAGATAGTCATCGACTGCCACTTATTCATACTAACCTAATGCATGATAACATGCG CTAACCGCTCCATACAAAGAACAAACAAGTATGGGGAAAGTGGATCACTTTGCCGCAAACCCCGCTTGGGAGACAAAGAC GACAACCTAGCTCCATTCCAAAGGAGGGATATGTGACGACAAATAGTGCATAATAAGGTTAACCACACTAGAGGGAAAAC CAAATGATACTAAAGTTTTCTTCAGAATCTCCTAACACACCCTATCATAAGCTTTATCAAGATCAAGCTTAAGGATCAAA TTATTATTCACTTTCCTCTTATGCGTAAAATGATTTTGATATTAGTCAGATTGACTGGTCAATTGGTGGTGAGGATTCTA TTCCATTTCAGCCACAGGACATGTTTGGAGGTGATGGACATGCGGTAAGTTATTCTTGGATGTTGGATCAGATAAAGTGA ACCTTTCTCCTGCTAAGAGAAAGTCAGATGAGGATTGTGAAAGTGCTGCTAGCAGTACCAGCCCAAAGACCCCTGAAAAG TATGAAGATTGAGAAGGATTGAACTTGTAGAGAAGACTCTTCTAGGCTTTAGATTGAAAAATCATGTCTTTTTTAGTTTT TTAGTTTCTATTTTTCAATTTATGTAAGCAATTTTGTTTATTTCAATTTTTAAGTTATCATATTCGGTCTTTTCCTTGAG TTGTGTTGTGCACCCCTTGGATTTGTATGATTGTATCTATAAATGATATATTTTCATTAAAAAAAAAAAGATAATGCAAC TCTTTGTATAAGACACAGA
CDS sequence (LotjaGi1g1v0540000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGAAAAATATGCAGCATGCGCCATAGGAATTGACCTTGGTACCACTTATTCATGCGTTGGAGTGTGGCAGGAGCA ACAAGATAGAGTGGAGATTATCCACAATGACCAAGGCAACAATACCACACCTTCTTTTGTTGCCTTCACAGATAAACAAA GGTTGATTGGGGAAGCTGCTAAAAATCAAGCTGCTACCAATCCAGACAACACTGTTTTTGATGCTAAGAGGTTAATTGGA AGGAAATTTAGTGACCCCATTATTCAAAAAGATATTTTATTGTGGCCCTTCAAAGTCATTGGCGATGTTAATGACAAACC CATGATTGTCGTTAGCTACAAAGGCCAAGAGAAGGAACTTTCAGCGGAGGAAATTTCATCTATGGTTCTCATAAAGATGA AGGAGATTGCAGAGGCATTTTTGGAGGCACCTGTGAAGAATGCAGTTGTCACTGTTCCTGCTTATTTTAATGACTCGCAG AGAAAAGCCACCAAGGATGCCGGTGCCATTGCTGGCCTCAATGTTATTCGTATAATCAATGAACCAACTGCTGCAGCTAT TGCATATGGCCTTGAAAACAGAACACGTTGTGTTGGAGAAAGAAATGTTTTTGTGTTTGACCTTGGTGGGGGTACTTTTG ATGTGTCTCTGGTTACAATTAAGGATAACGTCTTTGAAGTTAAGGCCACTTCTGGAAACACTCACCTTGGGGGAGAGGAC TTTGATAATAGAATGGTAGAATATTTGGCAAGGGAGTTCAAGAAGAAGCACAAAATGGACATCAAGGGGAATGCAAAAGC TCTGAGGAAGTTGAGAAAAGCATGTGAGAGGGCGAAAAGGACACTCAGTTTTGCTGTTGATACCACCATTGAGGTAGACG CTTTATTCGAGGGAATAGACTTTAGTTTTCCAATCTCTCGTGGGAGGTTTGAGAAGATCAACATGGATCTATTTGAGGAG TGTATGGAGACTGTGGAGAGGTGTCTTACTGATGCTAAGATGAAGAAGAGTAGTGTGGATGATGTCGTTCTTATTGGTGG TTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTACAAGATTTCTTCAATGGGATGGAATTGTGTAGGAGCATTAACCCTG ATGAGGCTGTTGCATGTGGTGCAGCCGTCCAGGCTGCTTTGTTGAGCGAGGGCGTTAAGAATGTTCCAAAGATAGCTCTT TCGGATGTTACACCTCTTTCACTAGGTATTGCAGAAGAAGGAGATCTCATGAGTGTTGTGATTCCTAGGAACACTACCAT TCCTGTGAAGAAAACAGAAGAATACGTTACAATTTATGATGACCAATCCAGCCTTTTAGTCGAGGTTTATGAGGGTGAGA GATCAAGAGCCAGTTATAACAATTTGTTGGGTTATTTTTATCTTACTGGCATTACTCCCGCTCCTCGTGGTCATCCTCAT GATGTATGCTTCGCTATTGATGAAAATGGTATCCTCACTGTTTCTGCTAAGGAAAAAACTAATGGCAATATGAATGAGAT TACCATAACCAATGACACAGGAAGACTGTCACCCGAAAAAATCAGAAGATTGATTGAAGAAGCTGAGAATTACAAGGCAG AAGATATGAAGTTCAAAAAGAAGGTTAAAGTAATGAAGGACATGGAGGATTACCTTTATGATATGAAAAAGCTTGTTACG GATAAGGGTGTCAGTTCTAAGCTTTCTACAGTGGACCAAGTTAAGATCAATTCAGCTATTGTAAAGGGAAAAATATTGCT TGGTGGTGACCAGCAGGAAGATACGTTTGTATTTGTGAACATGTTAAGAGAGCTTAAGAGCATATTTGAACCTGCAATGG CCAAGATTAATAATGGTTGGACTAATGAGGAAAGTGATAATGATTGA
Protein sequence (LotjaGi1g1v0540000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEKYAACAIGIDLGTTYSCVGVWQEQQDRVEIIHNDQGNNTTPSFVAFTDKQRLIGEAAKNQAATNPDNTVFDAKRLIG RKFSDPIIQKDILLWPFKVIGDVNDKPMIVVSYKGQEKELSAEEISSMVLIKMKEIAEAFLEAPVKNAVVTVPAYFNDSQ RKATKDAGAIAGLNVIRIINEPTAAAIAYGLENRTRCVGERNVFVFDLGGGTFDVSLVTIKDNVFEVKATSGNTHLGGED FDNRMVEYLAREFKKKHKMDIKGNAKALRKLRKACERAKRTLSFAVDTTIEVDALFEGIDFSFPISRGRFEKINMDLFEE CMETVERCLTDAKMKKSSVDDVVLIGGSSRIPKVQQLLQDFFNGMELCRSINPDEAVACGAAVQAALLSEGVKNVPKIAL SDVTPLSLGIAEEGDLMSVVIPRNTTIPVKKTEEYVTIYDDQSSLLVEVYEGERSRASYNNLLGYFYLTGITPAPRGHPH DVCFAIDENGILTVSAKEKTNGNMNEITITNDTGRLSPEKIRRLIEEAENYKAEDMKFKKKVKVMKDMEDYLYDMKKLVT DKGVSSKLSTVDQVKINSAIVKGKILLGGDQQEDTFVFVNMLRELKSIFEPAMAKINNGWTNEESDND
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 620 | 615 | 7.9E-283 | – | |
| PANTHER | 6 | 620 | 615 | 7.9E-283 | ||
| PRINTS | 8 | 21 | 14 | 1.7E-65 | – | |
| Pfam | 9 | 610 | 602 | 4.6E-218 | ||
| SUPERFAMILY | 9 | 192 | 184 | 4.84E-67 | ||
| Gene3D | 10 | 385 | 376 | 8.5E-164 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 38 | 50 | 13 | 1.7E-65 | – | |
| PRINTS | 60 | 68 | 9 | 1.7E-65 | – | |
| Gene3D | 73 | 128 | 56 | 8.5E-164 | – | |
| PRINTS | 148 | 168 | 21 | 1.7E-65 | – | |
| Gene3D | 194 | 368 | 175 | 8.5E-164 | – | |
| SUPERFAMILY | 200 | 389 | 190 | 1.57E-64 | ||
| ProSitePatterns | 205 | 218 | 14 | - | ||
| PRINTS | 211 | 221 | 11 | 1.7E-65 | – | |
| Gene3D | 237 | 320 | 84 | 8.5E-164 | – | |
| PRINTS | 339 | 355 | 17 | 1.7E-65 | – | |
| ProSitePatterns | 342 | 356 | 15 | - | ||
| PRINTS | 371 | 391 | 21 | 1.7E-65 | – | |
| Gene3D | 389 | 515 | 127 | 1.5E-45 | ||
| SUPERFAMILY | 394 | 543 | 150 | 1.44E-46 | ||
| PRINTS | 397 | 416 | 20 | 1.7E-65 | – | |
| PRINTS | 477 | 493 | 17 | 1.7E-65 | – | |
| SUPERFAMILY | 516 | 615 | 100 | 1.77E-6 | ||
| Gene3D | 516 | 619 | 104 | 9.4E-19 | ||
| Coils | 521 | 541 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0540000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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