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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0546300 |
| Transcript ID | LotjaGi1g1v0546300.7 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LisH domain and HEAT repeat KIAA1468-like protein; TAIR: AT5G16210.1 HEAT repeat-containing protein; Swiss-Prot: sp|Q08BT5|K1468_XENTR LisH domain and HEAT repeat-containing protein KIAA1468 homolog; TrEMBL-Plants: tr|K7K780|K7K780_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0546300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:107607445..107609498) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTCCAGTTGGCATGTGACCCATCAGGAGTGGTGGTGGAAACTACTCTCAAGGAATTGGTTCCTGCAGTTATAAAGTG GGGAAACAAATTGGATCATGCTTTGAGAGTTTTACTTTCTCATGTTTTAAGCTCCGCTATGGTACTTATTTTCCTTTGAA CTGACACTTCTCCCTTCAGTGACAATCAAGATTATGTTTCTGACAGGAGTTTCTTGCCTCAATCTACAGCGTTGTCCGCC TCTTTCTGGGGTTGAAGGGTCTTTAGAGTCACATCTCCGCGTCTTGGGTGAAAGAGAGCGGTGGAATATAGATGCTCTGT TGAGAATGATGGTGGAATTACTGTCTTTGGTGCACCAGAAAGCAATTGAGACATGCCCCTTCTCATGCACCTCAGAATCT GCCCAAATTGTGCTATCTACCCCATTGCTTGAATTGTATGCTAGGTAAGCTTAGCAAGAACCTCTTGATTTTGAAATAAT ACCACTCTGACATTTGAAACAGTCAATGAGCTGGGCATGAGTCTTAATGCCAAGTACCACCTGAGTATTGTTAATTCATG TTGTAATGTATGTGTTCAAAACATGCGTATTCATATATGCATAGACTGAAAGACAAATTGTGGATGCCTACACTATCGAA GATGCTACTCATCTTCAATGTGTCCATTTTTTGCTAGGGGACAAGTTGAATGGGAAGCATTTGAATGGATGCATGTTGAG TGCTTTCCTAGTTTGATACAGCTGTCTTGCTTATTACCACAGAAAGAAGATAATTTACGGAGCCGAATTTCTAAGGTTTC TTGCCTACTACCTTTTGAATTTTTTTTTTGATGGTTTCTTATGACTTCGGATCAAAACTATTTTTGAGCTTTTGCTGATA TAACTTTTGTAAATGCAGTTTCTGTTATCTGTTTCTGAATCGTTTGGGGATTCCTATGTGACATGCATCATGCTACCGAT ATTTTTAATTGCCGTTGGGGATAGTGCCGATTTGACATTTTTTCCAACTGCCATCCATTCAAGAATTAAAGGTAAAAGTT CTTCACTTTTCTGTGAATTTTTCGCATAATTGCTTCATATTTGACTGTTCACTTGTAGGCTTGAGGCCAAGATCTGCTGT TGCTGATAGACTCTCTACAATGTGTGTCCTACCACTTCTATTGGCTGGTGTTTTAAGTGCTCCTGGAAAACATGAACAGT TAGTAGAATATTTGAGGAAGCTGCTACTAGAAGACAAATCCATGGAGAACCGATCAACCAAACACATTCCTGAGATTATT AATGCTATCCGCTTTATATGGTTTGATTATCACCACTAACATTCTAAAAATTAAGATAATTTCTACTCCTATATTCATAA TGTGCTTTCTTTATAATGCAGCATATATGAACAAAATCATGGTATGATATTTAATATACTATGGGAAATGGTTGTCAGCT CTAACATGACCATGAAAATTAATGCCGCTCAACTGCTGAAAGTTATTGTAAGCCTACCGTTGTTTGAGTTTCGACTTTTG CGTTGTACTCATACAAACAAATGGCTAAACTAACACTAATATCTTCATAAACAGGTGTCATATATTGATGCAAAGGTTGC TTCAACTCATGTTTTGCCTGCCCTAATTACTCTGGGATCTGACCAAAACCTGAATGTGAAGTATGCCAGCATAGATGCAT TTGGGGCTGTAGCTCAACATTTTAAAAACGAGATGGTATCCATCACTAGTATATCTCTCTCTAGTTTATGTTGAAATTAT GATGTTTATGCTGTTCCTCATTTCAAATATCTGATCAAATAAGATATCTTCCAGATTGTTGACAAGATACGTGTGCAAAT GGATGCTTTTCTTGAAGATGGTTCCCATGAAGCTACTATTGCTGTTATTCGTGCGTTGGTGATTGCAGTACCACATACAA TAGAAAGACTTAGAGATTATATCCTTAACCCTACCTCTGGAAAAGAAATATGTTAAGAAAACTGCTTAATGTCCTGACAT TTTGTCTCATTGGTTATTTGCATATTTTTGTTGGCTTTCAAGGTCTCTCAAACT
CDS sequence (LotjaGi1g1v0546300.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCAGTTGGCATGTGACCCATCAGGAGTGGTGGTGGAAACTACTCTCAAGGAATTGGTTCCTGCAGTTATAAAGTG GGGAAACAAATTGGATCATGCTTTGAGAGTTTTACTTTCTCATGTTTTAAGCTCCGCTATGCGTTGTCCGCCTCTTTCTG GGGTTGAAGGGTCTTTAGAGTCACATCTCCGCGTCTTGGGTGAAAGAGAGCGGTGGAATATAGATGCTCTGTTGAGAATG ATGGTGGAATTACTGTCTTTGGTGCACCAGAAAGCAATTGAGACATGCCCCTTCTCATGCACCTCAGAATCTGCCCAAAT TGTGCTATCTACCCCATTGCTTGAATTGTATGCTAGGGGACAAGTTGAATGGGAAGCATTTGAATGGATGCATGTTGAGT GCTTTCCTAGTTTGATACAGCTGTCTTGCTTATTACCACAGAAAGAAGATAATTTACGGAGCCGAATTTCTAAGTTTCTG TTATCTGTTTCTGAATCGTTTGGGGATTCCTATGTGACATGCATCATGCTACCGATATTTTTAATTGCCGTTGGGGATAG TGCCGATTTGACATTTTTTCCAACTGCCATCCATTCAAGAATTAAAGGCTTGAGGCCAAGATCTGCTGTTGCTGATAGAC TCTCTACAATGTGTGTCCTACCACTTCTATTGGCTGGTGTTTTAAGTGCTCCTGGAAAACATGAACAGTTAGTAGAATAT TTGAGGAAGCTGCTACTAGAAGACAAATCCATGGAGAACCGATCAACCAAACACATTCCTGAGATTATTAATGCTATCCG CTTTATATGCATATATGAACAAAATCATGGTATGATATTTAATATACTATGGGAAATGGTTGTCAGCTCTAACATGACCA TGAAAATTAATGCCGCTCAACTGCTGAAAGTTATTGTGTCATATATTGATGCAAAGGTTGCTTCAACTCATGTTTTGCCT GCCCTAATTACTCTGGGATCTGACCAAAACCTGAATGTGAAGTATGCCAGCATAGATGCATTTGGGGCTGTAGCTCAACA TTTTAAAAACGAGATGATTGTTGACAAGATACGTGTGCAAATGGATGCTTTTCTTGAAGATGGTTCCCATGAAGCTACTA TTGCTGTTATTCGTGCGTTGGTGATTGCAGTACCACATACAATAGAAAGACTTAGAGATTATATCCTTAACCCTACCTCT GGAAAAGAAATATGTTAA
Protein sequence (LotjaGi1g1v0546300.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFQLACDPSGVVVETTLKELVPAVIKWGNKLDHALRVLLSHVLSSAMRCPPLSGVEGSLESHLRVLGERERWNIDALLRM MVELLSLVHQKAIETCPFSCTSESAQIVLSTPLLELYARGQVEWEAFEWMHVECFPSLIQLSCLLPQKEDNLRSRISKFL LSVSESFGDSYVTCIMLPIFLIAVGDSADLTFFPTAIHSRIKGLRPRSAVADRLSTMCVLPLLLAGVLSAPGKHEQLVEY LRKLLLEDKSMENRSTKHIPEIINAIRFICIYEQNHGMIFNILWEMVVSSNMTMKINAAQLLKVIVSYIDAKVASTHVLP ALITLGSDQNLNVKYASIDAFGAVAQHFKNEMIVDKIRVQMDAFLEDGSHEATIAVIRALVIAVPHTIERLRDYILNPTS GKEIC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 398 | 398 | 4.7E-235 | – | |
| PANTHER | 1 | 398 | 398 | 4.7E-235 | ||
| Gene3D | 133 | 397 | 265 | 6.7E-10 | ||
| SUPERFAMILY | 145 | 384 | 240 | 2.67E-12 | ||
| ProSiteProfiles | 318 | 356 | 39 | 10.349 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Trans-Golgi network | The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination. | ||
| Biological process | Intracellular cholesterol transport | The directed movement of cholesterol, cholest-5-en-3-beta-ol, within cells. |
Expression pattern of LotjaGi1g1v0546300.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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