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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0549600 |
| Transcript ID | LotjaGi1g1v0549600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta-Hydrolases superfamily protein; TAIR: AT5G38360.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q5R4F9|PPME1_PONAB Protein phosphatase methylesterase 1; TrEMBL-Plants: tr|I3SY68|I3SY68_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0549600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108001263..108005386) extracted from Lotus japonicus Gifu genome v1.2.
GATGGTGGAAAGAATGTCCAAGTGGCACTTAACGTGACAACTCAGCATTTCTGTTAACATCCGTTAACTTTTTTTAGCCC AAGGACTAACGTGAAGGGGATTTGCCACTTCCAGGGACCGTGAGAGGCATTTTAGAAGTTTAGGGACGAAGTTGAAGGCG GTGGACACTTTCAGGGACGAACTTGGCTATTTACCCTGGAAGTAAAGGAGGCTGCAGTTTGCACAATTGCTTGCTTCTGC TGCGGTACCCTTATCTGATTGAAGCTAAAGATCGAAACTTTGAAGAATAACAAGAAGAAAGACAATGACAGTGGCAATGA GTGTTTGTGTTTCATCGTTCTACAACCGTTTTCCAATTTGTTCCAATTCCAAGGTTTCTTCAAAGCCTGTAGCTGTCCTT AAAATGGGTGTCCCTTACGATCTGAAACAAGGGCAGTGTCGTGTTTTCCACCAGCTCCCATCTGGTCTGAACATGGAGGT GATTGTGCAGAAGAAGAGGAGAAATGTTGAAGATTACCCACCTTTGGTGTTTGTTCATGGTAGCTACCATGCTGCTTGGT GCTGGGCTGAACACTGGTTCCCTTTCTTTTCAGCTTCTGGCTATGATTGCTATGCTCTCAGCTTATTAGGACAGGTCCTC TCTCTCTCTCTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATTAAAC CCTTCACTTCCTTGGTATCATTGTGATTTGTGACTGATAGTAGTAGTTTTAGTGTCAAAGTAATAGTGCCAATGTGATGT CTGAATACCTTGTCGTCTCGAAAGGGATTAGTCTCCGGCTATCGGCTGGGCGAACAGTTGATGCACACAAAAAATGTGAG GTCTGAATTGTGTAACCTTGGTAACAAGCATTTCATTTTAGAGTATATAAACATTGGCTTTATGATCTACTATTTTTGGT GCCTCAAAATGTCTAACTATCTAATGCATGAATGAGGAGATTTCCTCCATTAGTTAGATGAACTCACATTATTGAGTTCT TCAATGAATATGATAGGTGCGGAATCCGAATACAAATTGTGAATAAACATTTCTGCTTGAATGCTTGTGTAAAGTTGTAT GTTTTTGTGGCTATGTTAATCCCACCCTCATTAGGATTCTTACTTTGCAGAAGTGGTCTTTAGGAGGAGATATATTCAGT TGTTTTATACATCAAATTGCTGCTGCAACACCTTCATTGTGATCTTCATCTTTCAATATGTGATTTTTTATCATACTTTT GGTGATTTTATTCTTTATGTGATTGTTTGCTATTGTTCTGGCATGTATTTTACATGGGCAGGGTGAAAGTGATGCACCTG CTGATTCTGTTGCTGGTACACTTCAGGTAGAGTACGTTTCCCTTTACTAGTTAAGATTTATCATCTATGAACTGTCAATT TCTGTGTGATAATTTGGACAAATGGATTATGGCCATATACTCTTATAGTTTCGTTTGTGCCATATTCTGCAGTAGACACA TGCAAGAGATGTTGCGGATTTTATCCATCAACAAGTTAGATCACCTCCTGTTTTGCTTGGACATTCATTTGGAGGACTTA TTATTCAGTATTATATTTCAAGTTTAGGAAGTAACGGCCTCAAAGGTACTTTCTGGTTCTAACTTATTCTTGCACTTGCT TCTTGAGAAATGTATAAATTAGAGGACTCTCGATTGCAAGCTCCTAGAGTGGTTAGCTGTTTAGAATTATTTATGGCCGA AGCTATATTTGGTTACTTTGAATTTGACATGAAAACACCATAGTCAATGTGGCCAAATAAACAGATTCTTGCTTTTTAAG ATATTGAGGACCAGTTTTGTTTTCAGAAAGAAGAACCTTTCAGGTATTGAGTGACTAATTTGTATATATAGTTGACGGTT TGATGCTTAGGGCATAAATGTGGCAATGTGGCATATGATCCTTAAGTTTCTCAATAAATTCAAATTGTAGATGTATACCC TTCATGATGTTATAGGCCTCTAGTGTATGCTTTAGGTTTCTGTTATGGTATCTGTTTTTGTTTATCTTCTTTTTTTTCTT CCCCCAACCCCTACATACACACGCGCTTCTGTTTTGACAAATTTTCTTTTTTCGTTCATTATGCTAATTCTGTTTGAGCT CGATTCTATTACAGAAAATTTATACCCAAAGCTTAGAGGAGCTGTCCTTGTTTGCTCTGTACCTCCTTCTGGTAATAGGT AACTAACAAAACTCTCTAGTTATTGTTATTTTTTAAGGTAGAGAAAGATAAAGAAACTTTAAATGACTAAAGTGGTTGAT AGTTTTTATTTATATTTAATAGTGGGCTAGTCTGGCGATATCTATTTTCCAAGCCAATTGCTGCCTTCAAGGTATTTGGA TTGACTTTTCTGAAAAATATCACTTTTCCTGCATTTTTTTTCTTCATATATGCATGTATCCCTCACAGACACCGTTTTGC AGGTGACGCGTAGCTTGGCAGCAAAAGGTTTTCAAAGCTCTCTTTCTCTTTGTAAGGAGACATTTTTCTCAGATACAATG GAGGATCATGTTGTTAAAAGGTTTGTTTTCCTAGAATCATTCTCTCATGAACACGACCTTTGCAATTTGAAACATAAAGG TGATGCTTAATGATATATTCAGAGCTTGTTACTAGATTTATATGGAAAATGGAATGGAACTATGGAAATGAACTAAGTCA TGTACCAAAACATCGTCAATTGTAACCAGAGCTTATTAACAGAGTGGAGGTGGGGGATGAAGGAAGAAAGTCCTTTCTAA AAACGCGCTTAACATGGAACCTTGACAATGCAGTACGTCAAGTCTCAAAGCTTTGTTTTTTTAGTAGTAAACACATTGAT TTACTGTGACTATGACTTTATTTGGAGTATATTAAAATAAATAAAGATTCTTTACTTGTAAAACATATTGATTTATTTGA AGTCAACAGAGAAAGAATAAACATTTTTATTATTGAGAGATAGATAGAAACAAATTATAAACCCCCTTAAAAGCATGAGA ATGCTGAATTCATGTTGAACATCAACTTAATTTTTTAGTTAAACATGTTATTAGTTATGCCTTTGGCTTGTTTTCATATT TCAGATATCAAGAGCTAATGAAAGAAAGTTCAAGGATGCCATTGTTTGACTTAAGAAAGCTGAACGCATCTCTTCCAGTT CCTTCGACGCCAAACTGCCCTCTTGATATTCTTGTTTTGGGTGCCAACAATGACTTCATCGTGGTAAGATCTATGTCTAC AAAATTATTAGCAACAAATAGCATGTTTGCTTTCACATTTGAACCTTCCAGAATAACTTTCCCCTTCCACAAAAGCTACT CCTGGTAGCTTCTCCAGAATCAGGTCTCCCTTAACATGAAAACCTACCGAGTTTCCAAACACACCATAAGTGCTTTTTTT CTGAAATGATATTGCATAACTCATTGAATTATTATTGCTAGGCTATCTTCTTTATCAATATTTTTATTATTTCTGCAACA TTATTTGAATTTGATTTGTGTACACCTTTTTTCATTGGGGAGTGTTTGTTGGTAATAGGATGCGGAAGGACTCAGAGAAA CAGCAAAGTTTTATGGGGTGTCCCCAGTTTGTGTCGAAGGAGTTGCTCATGACATGATGTTAGACACTTCATGGGAGAAA GGTGCAGAAGTTATTCTTTCATGGCTAAATGGTTTAAACAAGTAATAGTGTGTTTGGATTCGCGGTGGGAACACCATCTA AAGTTCAGTAGCTCCAGAAGCTACACTTTGTAACTTCTCCCTAAAGGTGATTATGGTTTCTTATCGTATAACCAAACACG CTATAAGAAGCAAGACATGGCAGAGGAAATCTTTTTGGTTCATTTCCCATTTTTCTATGAGGACATGCCTTTCTTTGTCT TGTTTGAATTTTCAAATAGTTAAAAATGATGTAGAAGATGCTCCAAGCTTCAAGTTGAGGCAATAGAGGAAGGTCCATGC AGGAGTGTGATTGAGCTGTATTATTACATTGATGTAGACTTACATTATTCATAAAAATATTTGCAACTTTTGGGGAGTAA TGATATGTACACACTTCATTTTCTAAACACTTCATTTCCACCTA
CDS sequence (LotjaGi1g1v0549600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGTGGCAATGAGTGTTTGTGTTTCATCGTTCTACAACCGTTTTCCAATTTGTTCCAATTCCAAGGTTTCTTCAAA GCCTGTAGCTGTCCTTAAAATGGGTGTCCCTTACGATCTGAAACAAGGGCAGTGTCGTGTTTTCCACCAGCTCCCATCTG GTCTGAACATGGAGGTGATTGTGCAGAAGAAGAGGAGAAATGTTGAAGATTACCCACCTTTGGTGTTTGTTCATGGTAGC TACCATGCTGCTTGGTGCTGGGCTGAACACTGGTTCCCTTTCTTTTCAGCTTCTGGCTATGATTGCTATGCTCTCAGCTT ATTAGGACAGGGTGAAAGTGATGCACCTGCTGATTCTGTTGCTGGTACACTTCAGACACATGCAAGAGATGTTGCGGATT TTATCCATCAACAAGTTAGATCACCTCCTGTTTTGCTTGGACATTCATTTGGAGGACTTATTATTCAGTATTATATTTCA AGTTTAGGAAGTAACGGCCTCAAAGAAAATTTATACCCAAAGCTTAGAGGAGCTGTCCTTGTTTGCTCTGTACCTCCTTC TGGTAATAGTGGGCTAGTCTGGCGATATCTATTTTCCAAGCCAATTGCTGCCTTCAAGGTGACGCGTAGCTTGGCAGCAA AAGGTTTTCAAAGCTCTCTTTCTCTTTGTAAGGAGACATTTTTCTCAGATACAATGGAGGATCATGTTGTTAAAAGATAT CAAGAGCTAATGAAAGAAAGTTCAAGGATGCCATTGTTTGACTTAAGAAAGCTGAACGCATCTCTTCCAGTTCCTTCGAC GCCAAACTGCCCTCTTGATATTCTTGTTTTGGGTGCCAACAATGACTTCATCGTGGATGCGGAAGGACTCAGAGAAACAG CAAAGTTTTATGGGGTGTCCCCAGTTTGTGTCGAAGGAGTTGCTCATGACATGATGTTAGACACTTCATGGGAGAAAGGT GCAGAAGTTATTCTTTCATGGCTAAATGGTTTAAACAAGTAA
Protein sequence (LotjaGi1g1v0549600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVAMSVCVSSFYNRFPICSNSKVSSKPVAVLKMGVPYDLKQGQCRVFHQLPSGLNMEVIVQKKRRNVEDYPPLVFVHGS YHAAWCWAEHWFPFFSASGYDCYALSLLGQGESDAPADSVAGTLQTHARDVADFIHQQVRSPPVLLGHSFGGLIIQYYIS SLGSNGLKENLYPKLRGAVLVCSVPPSGNSGLVWRYLFSKPIAAFKVTRSLAAKGFQSSLSLCKETFFSDTMEDHVVKRY QELMKESSRMPLFDLRKLNASLPVPSTPNCPLDILVLGANNDFIVDAEGLRETAKFYGVSPVCVEGVAHDMMLDTSWEKG AEVILSWLNGLNK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 332 | 306 | 1.9E-151 | – | |
| PANTHER | 27 | 332 | 306 | 1.9E-151 | – | |
| Gene3D | 49 | 329 | 281 | 3.3E-33 | ||
| SUPERFAMILY | 69 | 330 | 262 | 6.95E-35 | ||
| Pfam | 74 | 314 | 241 | 2.0E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0549600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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