Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0551600 |
| Transcript ID | LotjaGi1g1v0551600.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | T-complex protein 1 subunit zeta; TAIR: AT3G02530.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9M888|TCPZA_ARATH T-complex protein 1 subunit zeta 1; TrEMBL-Plants: tr|A0A072TVM3|A0A072TVM3_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0551600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108288795..108295014) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCGCTGCGAGTTCTGAACCCTAACGCCGAAGTGCTGAACAAATCGGCCGCACTTCACATGAACATCAATGCCGCCAA GGGCTTGCAAGATGTCCTCAAAACCAATCTCGGTCCCAAAGGCACCATCAAAATGTACTCTCTCCTTTCTCTTCTTCTCT TCTTCGCTTTTCCATTTCACTTTCCTCTCTCACTCACGCTCTCTCTCTATGAATCAGGCTTGTTGGTGGCGCCGGCGACA TCAAACTCACCAAAGACGGTAACACTCTCTTGAAAGAAATGGTCAGTTTCTAACTTTGTTATCGATCTACGAATAGGTTT ATTTGATTCAAAAAATAATGGTGTGGAATGCTGATCTCGTTTTTTTTGGTTTGTTCGTGGTTGCAGCAAATCCAGAACCC GACGGCTATTATGATTGCTAGGACGGCCGTGGCGCAGGATGACATCAGTGGAGATGGTACCACTTCTACTGTCATCTTCA TTGGCGAACTCATGAAGCAGTCCGAGCGTTACATCGATGAAGGTTATTCACTTTGTTACAGTATTGCTTATACACATATT TTTTTGAATGGTAAATGATTGTAGAGTTATTCATTGTATTGTAGTTGTACACCCTAATACGCGGCTATTAATCTTTAAAC GAAGTTTCCTGGTTGTTTTATGATTTCCCTGCCACATTGACAAATGGGAAATTAGGAATCACCATTACTAGCTTCTTGCT TTTAGTGTGTTGTAATTGGTTGCTTATTATGGTTAGTTTGGGAGAGATTTAGAGAAGTAGAAAAATGTGACTTGGGGGAT GATAAGAAGTTCTCTGCAACAGATAAACATAAATAAGTACATATCTAAAACATGTAATTAACTCCAGAGTCTATTTGTTT GTCTGTACGAGCAATCCTCTTGAAACAACCATGAGTTGTGCGCTGAGGAGATTTGATAAATGTAATCCTTTCCTGAGGGA GGGTTAGAGGAAAACAGAGCCCAAAATGCAAAGGATGTGGATGGGCATTTTTTTTCGTGTCTTTTTTGGTCATTTCTTTG AGACAATGTCTGAATGAATGTTCCAGGTATGCATCCACGTGTATTGGTTGATGGTTTTGATATTGCAAAAAGAGCAACTC TGCAATTTCTTGAGAAGTTTAAGACTCCTGTTGTGATGGGTGATGAGCCTGACAAGGAGATCCTTAAGATGGTAGCAAGA ACAACCCTGAGGACAAAGGTAAATCTCATTTTATATATCTCTGTTTGCTGTTACTGACAGAATGACCAAATATTTGTCAA CATAATTTTCACTAAGCATCACATACTTATTGTTATTTTATTTTCCTTCTCATTTGCAGTTGTACGAGTCACTTGCAGAT CAATTGACCGATATAATTGTTAAGGCGGTGAGTACATATGGAGGTGTTGACATTTTAGTTTTAGTCCTTCTAAATATTTT TGCATGTTTTTTGTTTGGACATTTGACTAAGCTGATGATGCTTAATGTTGGACCTTTTACAATTGGGTGTTCATTGAATT GTGGTTTTTCTATGATAGGTTTTATGCATCCGTAAGCCTGAGGAAGGAGTTGATTTGTTTATGGTGGAGATTATGCACAT GCGGCACAAGTTTGATGTTGACACACGCTTGGTATGTTTTATAATTACTGCCACTCTTCTGCTGACCAGATTTAGTTAGT TGTTTATTATTTTTATAATTTTCTTGAGACCCATACGATGTATTTACATCTAATAATGATGTTGCATTTTAACTCCTTAT TTTTGCTAGTAAATTTATAGTTTCAACTGAATATTACTCCAGCGATGATCTCAGGTATACGAGATATCGAAGGCTGTAGC TTCTAGTTATGGACTTCTAATCTAATTGTTTGTTTGGTTTGGTATAGTAGTTGACATTCTTTAAACTTGGTTGCCAAACT GAATGTAGACTGCATAGGTTGTTTTCCGGATTGGGATTTGATGCCTGGCTAAGATATAAAGAGACAAATTTACTTCTGAA AAATGTTTAAACATGGAGAAGCTGTTCGAGTATAAAAACAAAAAAGTACTCAAATACATTTAAAGATAAATAAATTTATT TTATGCTAAAAAAACGCTCATATAGGAACGACCTTTCTAAGAATCTCATCCATACCTGCCAAATAAGATAATTATATTTG TCATCCCTGTCTACATTTACCCCTGTTGTCCTGGTAAGCAAGGATGAAAATAATATTTGATCTCACTTTCCCTCTTTATC AAATATGAACAGTTGTTAAGCTTATCTCTTGCCTATTTCTCTGTGGCTTAGAAAAGCTCAGTAACTTGTTGCCTGTGCTT CCATAACTGATACAGACCAATTTTGACTATGATTACAAATTGTTGTTGGATTAGAGGCCTAGGGTTTACTCTGTAACTCT CTAGAGAAGTAGCAAGAGGAAGAGTTGTGAGGAGATCTAAAGCACAGTGGTTAAAAGAAAAGATTATGTTAATTTAATAT CTTAACTCATAATTAAAATGTGTAAATGAACTAAGCTACATCCTTGTGCTACTGTTAAAGATAAATAAATTTATTTTATG CTAAAAAAACGCTCATATAGCAACGACCTTTCTAAGAATCTCATCCATACCTGCCAAATAAGATAATTATATTTGTCATC CCTGTCTACATTTACCCCTGTTGTCCTGGTAAGCAAGGATGAAAATAATATTTGATCTCACTTTCCCTCTTTATCAAATA TGAACAGTTGTTAAGCTTATCTCTTGCCTATTTCTCTGTGGCTTAGAAAAGCTCAGTAACTTGTTGCCTGTGCTTCCATA ACTGATACAGACCAATTTTGACTATGATTACAAATTGTTGTTGGATTAGAGGCCTAGGGTTTACTCTGTAACTCTCTAGA GAAGTAGCAAGAGGAAGAGTTGTGAGGAGATCTAAAGCACAGTGGTTAAAAGAAAAGCTTATGTTAATTTAATATCTTAA CTCATAATTAAAATGTGTAAATGAACTAAGCTACATCCTTGTGCTACTGTATTACTGTAGCATAGGCAGTATTCTTCATC TACAAAACATAAATAGCAACTAATATTTATCTATCATTTTTCACATATTTCACATTTATTTATATTGCACCGTGGCTCTC TGTACTGGGTTTACCTAAGCAGTTTATCAAATAACTCTTGCAATCAGCCAAATCACTGGATTTGTTTTTCTAGGTTGAGG GTCTTGTCCTTGATCATGGTTCTAGGCACCCTGACATGAAACGACATGCTGAGAACTGCCATATCTTGACATGCAATGTA TCTTTGGAGTATGAGAAGAGGTAATCTAGCTGAGTTTTGCCAATATGTGTACGTGTGTGTGTCAGTTAAAATGGCAGTTA CTTGGTGTTTTTAACCTGTTTCTATTCACACGTCAGTGTATTTGAAGAGCTAAGACTCTATCACACTCACTTCTTAATCT GTATACCCAAACAAGGCTGTTCTAGAACTATTGATAATGTTGAAACTAATGTATGAAGTTTTTAATATTCGCCAGTTAAA AAGAGTATAAAAACCAAGAATTTTGAAGTTTTTCTTCTGGTGATAACCGTGTGTTGTTAGCTTTACTCAATTGGTCTCTG TTCTGGTGATTGCGTAGTTTCTGTTCATCAGAAAATGTTAAATTAGTATGCTCACATCAAATTTTTGTGATTTTTATGTT AACTCTGTCTTACTAAGAATGGCTTTGTTAACCAAGAACAAATTATTCATTCATGTACTAAATGGAAAAATTGGATACTC ACTTTAAAAATGTCTTTATCATATATCTGAATTGTACGTTTACACTTTCTTTGTCGAAAAAATGTTTTTAACCTAAAACA AATCTAGTGTAAATTTACTACAGGGATTTTTTTTTATTTCATTCCTCTATTTTGCTGGCATTACAATGATAAATTTAATA ATTATACATTTATACTTGCATAAACATTGTTTGGTGAATAGTCTTATCACATTAGTTAATGCTGGATCCATTGTATGTTT TTTTATCATCGGATTCCTGACCTTATGAACTCATTAGTTCTCTTGGATGGCTGGATGTAGTCTGTGACTAACCGAGTCAA TCTTTTGTCCTCTCAGTGAAGTAAATGCAGGTTTTTTCTACTCAAATGCTGACCAGAGAGAGGCTATGGTTGTTGCTGAA AGGCGCCAGGTTGATGAGAAAGTTCAAAAAATTATTGAGCTGAAAAAACAGGTAGAAAAGACATACTCAATACGTTTTTG TTTGTTATATTGCAATCATAATATTTCTCATCGCATTTTTCTAATTGCCTCCATACTTGTATGTGCAGGTTTGTTCAGGT AATGATAGCAACTTTGTTGTCATCAACCAAAAAGGAATTGACCCCCCATCACTGGACATGCTGGCAAGGGAAGGAGTAAG TAACGTACCATTATATTTAAGAAGTCCTTCAAATTTACTATTGTAAAATAGCTACTTCATGCAAAATATTCTTTGGAATT TGATTATGTACTGGGCATTGTACGCAGGGATTTAGGGCTTTTAGAATTTAATGTTTCAAGAGAATTTAACTGTGATTTTC TTTCCTTTTTCAATGAAAAATTTTCTGACAATGAAGTCAGGCGCTTTGGATATTTTGGTAATGTATGGAATTGGTGCTAG AGCTGCAGTATTTGTTTGTTTTCTTTTTTTGAAATAATCATGAGACTTGTGATTCACTGATATGTCTAAATGTATTGATT GAGTGTGTTGCTGAGCTGTAGATGGCCATGGCGCCAATTGCATATTTTTTAGCCATTACTCGAGCTGACATATTCATTTT CCTTGTATATCATCTACTGATAATTTTATCCTTGTGTTTTAGATAATTGCTCTTCGTAGAGCAAAGAGAAGAAACATGGA AAGATTGGTTTTGGCATGTGGAGGAGAGGCAGTGAACTCTGTAGATGATTTGACTCCTGAATGCCTGGGTTGGGCAGGAT TGGTATATGAGCATGTCCTTGGTGAAGAGAAATATACATTTGTGGAAAATGTTAAGAATCCCTTCTCTTGCACAATCTTG ATTAAAGGTACATCATCCTTTTACATATAGTGAGTTTGTCCAGTGTATCCTTCTATGTTTTTCTTTTTTTTACGTCATTT GCTATACATCTTAGGAGCAAACTTTGTGTCAATTTATTATCACTATTGTTGTATTTGATTGAGATATGATGGTTGCAATG ATGTGTCATGGTGCAGGTCCTAATGACCACACAATAGCTCAGATCAAAGATGCTGTCCGTGATGGTTTGAGGGCAGTAAA GAACACCATTGAAGATGAATCTGTTGTCTTAGTAAGACTTCTTGTTTGGTCAATCAGTTATTTTGATGCCTGTATTATAC AATTTTTTTTTTGTGTGATAGACTTGAGATGAATTTCCTTGTCCATGTTCAGGGGGCTGGTGCATTTGAAGTTGCTGCTA GACAATATCTGATTAATGACGTTAAGAAAACAGTTCAAGGGGTAATATGAATACTCTCACTATTTCCATGCTTATATTGT TCTTTATCTGTCAATTACATTTCAACACTGATGTTTATAACCTTGAATCAGCGTGCACAACTTGGTGTTGAAGCTTTTGC TGATGCACTTCTTGTGGTGCCTAAGACACTAGCTGAAAACTCTGGGCTTGACACTCAAGATGTGATAATTTCCCTTACGG TATGCTTCCTTTAAATGTATTGTACTTGTCTTCACATCCCTAATGGGATTGTTTAGATATGCTCATATGAAGTGGGAGAC AAATTGGCATTATTATTATACTTGCTGAGTGCTGTTTCAGGGAGAGCATGACAGAGGAAATGTTGTGGGATTGTGCCAAA ACACTGGAGAACCTATAGACCCTCAAATGGAGGGTATTTTTGACAATTATGCTGTGAAGCGCCAAATCATAAACTCTGGG TATGGTTGAACCTTGACTGTACACTTCAAATCTGCTTCCCATATCCATGTTCTCCTGCATCAAGTTTCGTTACTAATTTT TATGATATTATTACAGCTAGTTAATTTGAAAACTTTATTTGAAAATTCCACATTTATTTGCATCAAAACAATAATTTTCA TGTACATTGATTTGTGTTGCAATCATGTAATCTTATCTCTTTTACTGTCCATGCAATACTACAGGCCTGTTATAGCATCC CAGTTGCTATTGGTGGATGAAGTTATTCGTGCTGGACGTAACATGCGGAAGCCAACTTAG
CDS sequence (LotjaGi1g1v0551600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCTGCGAGTTCTGAACCCTAACGCCGAAGTGCTGAACAAATCGGCCGCACTTCACATGAACATCAATGCCGCCAA GGGCTTGCAAGATGTCCTCAAAACCAATCTCGGTCCCAAAGGCACCATCAAAATGCTTGTTGGTGGCGCCGGCGACATCA AACTCACCAAAGACGGTAACACTCTCTTGAAAGAAATGCAAATCCAGAACCCGACGGCTATTATGATTGCTAGGACGGCC GTGGCGCAGGATGACATCAGTGGAGATGGTACCACTTCTACTGTCATCTTCATTGGCGAACTCATGAAGCAGTCCGAGCG TTACATCGATGAAGGTATGCATCCACGTGTATTGGTTGATGGTTTTGATATTGCAAAAAGAGCAACTCTGCAATTTCTTG AGAAGTTTAAGACTCCTGTTGTGATGGGTGATGAGCCTGACAAGGAGATCCTTAAGATGGTAGCAAGAACAACCCTGAGG ACAAAGTTGTACGAGTCACTTGCAGATCAATTGACCGATATAATTGTTAAGGCGGTTTTATGCATCCGTAAGCCTGAGGA AGGAGTTGATTTGTTTATGGTGGAGATTATGCACATGCGGCACAAGTTTGATGTTGACACACGCTTGGTTGAGGGTCTTG TCCTTGATCATGGTTCTAGGCACCCTGACATGAAACGACATGCTGAGAACTGCCATATCTTGACATGCAATGTATCTTTG GAGTATGAGAAGAGTGAAGTAAATGCAGGTTTTTTCTACTCAAATGCTGACCAGAGAGAGGCTATGGTTGTTGCTGAAAG GCGCCAGGTTGATGAGAAAGTTCAAAAAATTATTGAGCTGAAAAAACAGGTTTGTTCAGGTAATGATAGCAACTTTGTTG TCATCAACCAAAAAGGAATTGACCCCCCATCACTGGACATGCTGGCAAGGGAAGGAATAATTGCTCTTCGTAGAGCAAAG AGAAGAAACATGGAAAGATTGGTTTTGGCATGTGGAGGAGAGGCAGTGAACTCTGTAGATGATTTGACTCCTGAATGCCT GGGTTGGGCAGGATTGGTATATGAGCATGTCCTTGGTGAAGAGAAATATACATTTGTGGAAAATGTTAAGAATCCCTTCT CTTGCACAATCTTGATTAAAGGTCCTAATGACCACACAATAGCTCAGATCAAAGATGCTGTCCGTGATGGTTTGAGGGCA GTAAAGAACACACTTGAGATGAATTTCCTTGTCCATGTTCAGGGGGCTGGTGCATTTGAAGTTGCTGCTAGACAATATCT GATTAATGACGTTAAGAAAACAGTTCAAGGGCGTGCACAACTTGGTGTTGAAGCTTTTGCTGATGCACTTCTTGTGGTGC CTAAGACACTAGCTGAAAACTCTGGGCTTGACACTCAAGATGTGATAATTTCCCTTACGGGAGAGCATGACAGAGGAAAT GTTGTGGGATTGTGCCAAAACACTGGAGAACCTATAGACCCTCAAATGGAGGGTATTTTTGACAATTATGCTGTGAAGCG CCAAATCATAAACTCTGGGCCTGTTATAGCATCCCAGTTGCTATTGGTGGATGAAGTTATTCGTGCTGGACGTAACATGC GGAAGCCAACTTAG
Protein sequence (LotjaGi1g1v0551600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTA VAQDDISGDGTTSTVIFIGELMKQSERYIDEGMHPRVLVDGFDIAKRATLQFLEKFKTPVVMGDEPDKEILKMVARTTLR TKLYESLADQLTDIIVKAVLCIRKPEEGVDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRHAENCHILTCNVSL EYEKSEVNAGFFYSNADQREAMVVAERRQVDEKVQKIIELKKQVCSGNDSNFVVINQKGIDPPSLDMLAREGIIALRRAK RRNMERLVLACGGEAVNSVDDLTPECLGWAGLVYEHVLGEEKYTFVENVKNPFSCTILIKGPNDHTIAQIKDAVRDGLRA VKNTLEMNFLVHVQGAGAFEVAARQYLINDVKKTVQGRAQLGVEAFADALLVVPKTLAENSGLDTQDVIISLTGEHDRGN VVGLCQNTGEPIDPQMEGIFDNYAVKRQIINSGPVIASQLLLVDEVIRAGRNMRKPT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 184 | 184 | 1.0E-48 | ||
| PANTHER | 2 | 537 | 536 | 0.0 | – | |
| TIGRFAM | 2 | 535 | 534 | 1.9E-270 | ||
| PANTHER | 2 | 537 | 536 | 0.0 | – | |
| CDD | 6 | 531 | 526 | 0.0 | ||
| SUPERFAMILY | 11 | 528 | 518 | 4.45E-74 | ||
| Pfam | 29 | 530 | 502 | 3.8E-161 | ||
| PRINTS | 31 | 47 | 17 | 2.1E-22 | ||
| ProSitePatterns | 34 | 46 | 13 | - | ||
| PRINTS | 53 | 71 | 19 | 2.1E-22 | ||
| ProSitePatterns | 55 | 71 | 17 | - | ||
| PRINTS | 83 | 102 | 20 | 2.1E-22 | ||
| SUPERFAMILY | 145 | 406 | 262 | 2.41E-23 | ||
| SUPERFAMILY | 206 | 381 | 176 | 6.28E-48 | ||
| Gene3D | 212 | 372 | 161 | 1.8E-76 | ||
| Gene3D | 373 | 537 | 165 | 7.3E-35 | ||
| PRINTS | 376 | 398 | 23 | 2.1E-22 | ||
| PRINTS | 412 | 424 | 13 | 2.1E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi1g1v0551600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…