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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0558200 |
| Transcript ID | LotjaGi1g1v0558200.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparan-alpha-glucosaminide N-acetyltransferase; TAIR: AT5G47900.1 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624); Swiss-Prot: sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase; TrEMBL-Plants: tr|I1K6Y3|I1K6Y3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0558200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109049603..109054839) extracted from Lotus japonicus Gifu genome v1.2.
TGGTCATGCCGGTGGTAAGACAATTGGCGAATCCGAAGGGATCCAATGAAATGGCTCCATGGTGTCACAGACAGTAAATT GCAAAGCATGTTCCATTCCAAGGACAAGGACAAGGTTCTTACGCCGTCCCCTCTTTTTCTTCTCCGCCCTCAACAAACAA AGAAAAAGGAAACACAGTCAACAGTCAACAACAACAGTGAGCTCACACAGATTTACATGAACAAGTAACGCACACGCTCG ACAACATACATTAATTCATGGCTGATCCACAACCGTTGTTGCTCAACGAGCCAACTCAGCTTCAACAACCACCCCGAATC GCCTCCCTTGACGTCTTCCGTGGCCTCTCCGTTTTTGTAATTTCACTCTCTCTTTCGAAATTGAATGAACATGTACTATT GCTTTATTTCTGTTAGTTTTTGCTTAAACATGAAGCCATCTTTTGTTTTCAGCTCATGATATTGGTCGATTATGGTGCCT CCATCTTCCCCATCATTTCTCACGCCCCTTGGAATGGTATTCATTTAGCTGATCTCGTCATGCCATTCTTTCTATTTATC GCTGGAATCTCTCTCTCGCTTGTTTATAAGGTACCTTCTCAGTCCCACTCCCCACTCCTTTATCATTAAATTCGATTCCC CTTCAATACAGCTAGCATTTTCACTCCACCTACCAAGTAGAATTAATCAAAACCCTTTATTTTTTTGTTCTAACAAAACG TCAGAGAAGGCCCAGCAGAACACAAGTTACATGGAAAGCCTTAGTTAAAGCTGCCAAACTCTTTATACTTGGTATTGCTC TTCAAGGTAATATCTTCTAAATCCTTAAACCTGCCAATGCATGTATATTTAATTAGACCATGTTCACCCAATTTCTTTGC ACTAGCAACTAGCAACCAGGTGTTACTGTCATACTAGTTTTACAAGGTGAAACATTCATAATGGCATGTATTCATTTCAG GTGGTTATTTTCATGGGATAACTTCCTTGACTTATGGTGTTGACATTGAAACAATTCGATGGCTCGGCATTTTACAGGTC ATCGTCAATTTGATAATCTTTTGACTACTTGTTGACTTAGCTGTTTCTTGCTGACTAATAGCATAACGCAGTAGCTAACA AATTTGAATTGATGATCCATGAATCCAGAGGATATCTATTGGATACATTGTTGCTGCTCTATGTGAGATCTGGCTTCCAG TCCTTAGATGGAAAGAATCAGGTTTCTTCAGAAGTTATTACTTGCATTGGTGAGACCTTCTTTATCATTTTTATTTTTCA AATCATTATATCTGTTGGACCGAATATGTCTGTAAAGATGGTCCCAAAATAAAATTCATGCTAGATCATAATCACAATGA TTGTTCACTTTAGACAACTAGTTGCTGCATCAGCATGTAGTACATCTAGCTTGGTACTCTCCAAAGTCCCAACTCAAAGA TGTTAATAGAAAATTAGTTACATACATTTAAAATAACAGGATTACTCCATTTTACATTTACTTAAATTAGCAAAATTTAT TCTTTGAGTAACTTAATGTATTTGTATTTCTTTTATCTACTATTCCTTTCCTCTTAATTTTACCAATATTTTTATACAGG TTTTTAGCAGTGATATTGTTGGGGATTTACTCGGCACTACTGTATGGTCTATATGTTCCGGATTGGCAGTTCCATGTATC AGCATCGACCTCTTTGTTGCCTCCAACAGATGGTGGCAAGGTTTACACGGTGGGCTCAGCACCCCTCACTCCTCATCTTG CTATCTTTTGTGTGCTTCTTTGTTTCGGGTTTGACATGTTGCACAATATTGAAAAATTTATGGTGAAAGAAAATTGTTTC TATTTGCTAGTCTCAGATATCTTTGTTTAAGGTTAGGGAGGAAATGTACAACTGGTGGGTCATCGATGGTCCTCTTTCTG ATTCTAATATGAATATTCACATGTCTCACTGTTGATTTCATATATGAATTCTTCTAAATTTTGACTGTGAAGACTGAAGA TAGTTATCCAATGCTTATTAATTTTCAAAAAGTTTACCTGCTCACTCATATTTAAAATTCATTTGTTTGCAACTTCATAA TGCTCACAAGGTTCTCAATTCAATACCAGGTGAATTGTTCAGTGAGAGGTGATCTTGGACCTGCCTGTAACTCTGCTGGA ATGATTGATCGCTATATTCTTCGTCTTGACCATCTGTACAGAAAGCCTGTTTACAGAAATCTCAAGGTTTCTTATAATTG ATCGTTGATCGCGTTTCTTTTTCGTGAATATCCCCTAGGCAAACAGCTTTTGAGATATAGATTAGTCCCATTTCCTTGCT TGATGTTTTACACTTTTACTACATAATATGACATATTAATGCCTTTTAATGATCTAACTTCCAGGAGTGTAATATATCTG GCAAGGGTCACGTTCCAGATAGTTCACCATCTTGGTGCCATGCTCCTTTTGATCCAGAAGGCATTTTAAGGTGACCAGTC TAGACTTTCAAAAATCCCCTGCAATTCCATTAGTTAAATTCCTCCATGTTGAGTAGTCTAAGTCTACGTTATATCTTGTT AAGTTAAAGACAAGTATGCTGGGTGCAAATTGAAGCTTCTTTTGTAGTTTAATGTGATCTTCTTTCTGATTAGTTATCTC ATGGAACTATAACCGTACACTTTTATAAGTGAAATAGAGAAAATGGCATGCTGATTAAACGCACTCGGCCTCATGTGATA CATAATGTAGAAACATTAGAAGATGTACCTTCTAGAAATCTTCTTTAAGCAAAGTATTCCATTGCTAGTTATTGAGACAA TGTAACAAGGTCCAAGTGATATTATTCAAAATCAAACCTGGTTGATTTTCCTTTTAAACTCTTATGAAAAAATGATCTCC TTGTTGATGAGTCCTTTTGTCAGAACAGGTTCAATCACTGTACTGAACTACTGAAGTGATGATCTTCAATAAGTTTGGCA GCCTTGCAGGCATCATTATAGAACATAGACATTGATCCATATAAACTTCAAAGGATTTCTACTTTTTGAAAGACGAAGTT CTTATGCACTTTCAATAGGATTTCCACTTTCTGAAAGACAAAGTTCTTATGTACTTTCAATTAATATTGACCTATAGGTC CTTATTTTTTTTGGAACAGTACTCCTGTTTGTTTGTTATCCATTGTGCTGAATGATGTGATCACCTGTGAATTGATTCCT TAGAATTCCGATTTCCATGATTGATTCATAAACCTGAAAAGTTTATTTCTACAAAGTAAATTGCAAATATCATTACAATC TTCTCATTTTTTTCTGGTGCTTACATTCTTTTCATATTCCCTATCGATAGCTTGGCAATGAAGATTTATCTAAAAGCAAA CTGAGTGTTGGACTTGGTTGTATGCTTTATATTAGTAACCGCGTTACGTTGATTGGTACCAACAGAAGTCATTTTGTAAT TCTTTTCAAATGGTTTACAGCTCCATAACAGCCGCAGTTTCGTGCATAATTGGACTTCAATATGGTCATGTGCTTGCGCA TCTAGAGGTGAGATCATGTATCAAGTTTACTGAACCCTCACAGCCTGTAAAATTTTAGCTTTTTCAATTATAAGAGTTCT TTAAAGTTTTAAATCTATAGTATAACACTAATTCCCCTTGTAGCTTGTTTTTCCACATCCTCTTGCATTGTAGCTTGAGA TTTTCTTCTTGATTGCCTGGTAGAGCTGAGAAAACTGACCTTTTTTTCTGTATACTTGTACTGTAGGACCACAAGGGACG CCTAAACAACTGGCTGTGTTTTTCAGCTTCATTTTTAATCCTTGGATTGTTCATGGCATTAATAGGTTTGTGTAGTAAAC TTTCTATGGGTATCTTCAGCTTATCAAATACCTACTAGAAGTTACTAAATACTGACTGATGATAATTTGAGCATTCTCTC TTTATAGTCATGGTTATCTGGTCATCAGCTAACCAACTTCTGATGCCTTAGAAAATGTTGTATTTATTTTTTACCTCTTT TCCCCTTTCATTTTCAGGAATTCCTCTAAATAAGTCACTGTACACAGTCAGTTATATGCTGGTTACTTCGGCAGGCTCTG GTTTCACATTCATTGCTCTATATGTTCTGGTGAGTTCCATGTGCTGTGAAAGTAGAAAACTACCTGGACATATATATTAT ATATAATTCCTTTTATTTTAGGGGGATATAATGAGCTTGAAGATTTAAATCTATGTACTGTTGCAAACAAAGTGATCCCT TTCCCTTCCCTATAATGACTGCATGATGTCAAAGGTTTATCATTGGCATTATTTATAGGGATCACTTTGTTTGTTTGGAA CAAACCCAATTTGACCAAATTATAATTCATTTTCGCACACTGCAGGTAGATGTTTACGGCCACAGGTGTTTCACAAGTGT ATTGGAGTGGATGGGAAAGCACTCGTTGAGTATATTTGTCCTTGTATCTTCAAACTTAGCTGTGATTTCTATCCAAGGAT TTTATTGGCGTAAACCAGAAAACAACATTGTAAGATACTGCTCCATGCTATGCTAGCTGCTTTGTGTTGGGAAAAGTTTA CAAACTTTAATTGACTATAGTGTTTAATTTGGGTGTTCTTTTGTTCCTTGCAGATACACTGGATTGTGAGACGTTTTGAC CACAGATAAGGTCCTTGCTTCCTATTCAACTGCTGTTGAATTTACACCCTCGCCTTTGACATTATTGTGTATATATTTAT AGGCATAGGTTTGTTATTTCCACCCTAGCTAGGTGCTTCCTAAATTGTATAGATACTTTCAAATTCAAATTGCACAACTA AATTAGCATACTTTTTGGTCAACATTGTCACTGGTTATTGGTGGTGCGCAGGTCAGACACTCTTTTTTCAGTTGGGATGG TCAATTGGTCATTGAATCTTTTCATGCAAACAAAAGAAAAAATATTATAAAAAGTTCCTTTGGCTTTCCAGTATACTGTA CTCATTTAAATCTTCTGGAGTAATGATATATACACACCTCATTTTTAAAACACTTCATTTCCACCTCTTTTTGTTTTTAT CTCTCTCCTCTTATCATCTATCACATCTCATACTTTCTCTTTCTTACTTTTTTCTTTCTTCCTATCTCTCTCCTCATTCC ACCTCTTACACCTCTTACACCTTAAAAAGAGGTGTGTATGTATAATTATTCAAATCTTCTGTGCACAAAAAATATCTGTC TGGAAAGAAATTATTTATATATATGCTTAAATATTCC
CDS sequence (LotjaGi1g1v0558200.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGATCCACAACCGTTGTTGCTCAACGAGCCAACTCAGCTTCAACAACCACCCCGAATCGCCTCCCTTGACGTCTT CCGTGGCCTCTCCGTTTTTCTCATGATATTGGTCGATTATGGTGCCTCCATCTTCCCCATCATTTCTCACGCCCCTTGGA ATGGTATTCATTTAGCTGATCTCGTCATGCCATTCTTTCTATTTATCGCTGGAATCTCTCTCTCGCTTGTTTATAAGAGA AGGCCCAGCAGAACACAAGTTACATGGAAAGCCTTAGTTAAAGCTGCCAAACTCTTTATACTTGGTATTGCTCTTCAAGG TGGTTATTTTCATGGGATAACTTCCTTGACTTATGGTGTTGACATTGAAACAATTCGATGGCTCGGCATTTTACAGAGGA TATCTATTGGATACATTGTTGCTGCTCTATGTGAGATCTGGCTTCCAGTCCTTAGATGGAAAGAATCAGGTTTCTTCAGA AGTTATTACTTGCATTGGTTTTTAGCAGTGATATTGTTGGGGATTTACTCGGCACTACTGTATGGTCTATATGTTCCGGA TTGGCAGTTCCATGTATCAGCATCGACCTCTTTGTTGCCTCCAACAGATGGTGGCAAGGTTTACACGGTGAATTGTTCAG TGAGAGGTGATCTTGGACCTGCCTGTAACTCTGCTGGAATGATTGATCGCTATATTCTTCGTCTTGACCATCTGTACAGA AAGCCTGTTTACAGAAATCTCAAGGAGTGTAATATATCTGGCAAGGGTCACGTTCCAGATAGTTCACCATCTTGGTGCCA TGCTCCTTTTGATCCAGAAGGCATTTTAAGCTCCATAACAGCCGCAGTTTCGTGCATAATTGGACTTCAATATGGTCATG TGCTTGCGCATCTAGAGGACCACAAGGGACGCCTAAACAACTGGCTGTGTTTTTCAGCTTCATTTTTAATCCTTGGATTG TTCATGGCATTAATAGGAATTCCTCTAAATAAGTCACTGTACACAGTCAGTTATATGCTGGTTACTTCGGCAGGCTCTGG TTTCACATTCATTGCTCTATATGTTCTGGTAGATGTTTACGGCCACAGGTGTTTCACAAGTGTATTGGAGTGGATGGGAA AGCACTCGTTGAGTATATTTGTCCTTGTATCTTCAAACTTAGCTGTGATTTCTATCCAAGGATTTTATTGGCGTAAACCA GAAAACAACATTATACACTGGATTGTGAGACGTTTTGACCACAGATAA
Protein sequence (LotjaGi1g1v0558200.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADPQPLLLNEPTQLQQPPRIASLDVFRGLSVFLMILVDYGASIFPIISHAPWNGIHLADLVMPFFLFIAGISLSLVYKR RPSRTQVTWKALVKAAKLFILGIALQGGYFHGITSLTYGVDIETIRWLGILQRISIGYIVAALCEIWLPVLRWKESGFFR SYYLHWFLAVILLGIYSALLYGLYVPDWQFHVSASTSLLPPTDGGKVYTVNCSVRGDLGPACNSAGMIDRYILRLDHLYR KPVYRNLKECNISGKGHVPDSSPSWCHAPFDPEGILSSITAAVSCIIGLQYGHVLAHLEDHKGRLNNWLCFSASFLILGL FMALIGIPLNKSLYTVSYMLVTSAGSGFTFIALYVLVDVYGHRCFTSVLEWMGKHSLSIFVLVSSNLAVISIQGFYWRKP ENNIIHWIVRRFDHR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 413 | 413 | 5.5E-228 | – | |
| PANTHER | 1 | 413 | 413 | 5.5E-228 | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Pfam | 20 | 153 | 134 | 1.4E-5 | ||
| Phobius | 26 | 49 | 24 | - | – | |
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 50 | 60 | 11 | - | – | |
| TMHMM | 56 | 78 | 23 | - | – | |
| Phobius | 61 | 78 | 18 | - | – | |
| Phobius | 79 | 97 | 19 | - | – | |
| Phobius | 98 | 118 | 21 | - | – | |
| TMHMM | 98 | 120 | 23 | - | – | |
| Phobius | 119 | 129 | 11 | - | – | |
| TMHMM | 130 | 151 | 22 | - | – | |
| Phobius | 130 | 151 | 22 | - | – | |
| Phobius | 152 | 162 | 11 | - | – | |
| Phobius | 163 | 184 | 22 | - | – | |
| TMHMM | 163 | 185 | 23 | - | – | |
| Phobius | 185 | 274 | 90 | - | – | |
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 275 | 296 | 22 | - | – | |
| Phobius | 297 | 307 | 11 | - | – | |
| TMHMM | 308 | 330 | 23 | - | – | |
| Phobius | 308 | 329 | 22 | - | – | |
| Phobius | 330 | 334 | 5 | - | – | |
| TMHMM | 335 | 357 | 23 | - | – | |
| Phobius | 335 | 357 | 23 | - | – | |
| Phobius | 358 | 376 | 19 | - | – | |
| Phobius | 377 | 397 | 21 | - | – | |
| TMHMM | 378 | 397 | 20 | - | – | |
| Phobius | 398 | 415 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0558200.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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