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LotjaGi1g1v0572000.1

Overview

Field Value
Gene ID LotjaGi1g1v0572000
Transcript ID LotjaGi1g1v0572000.1
Lotus japonicus genome version Gifu v1.2
Description Exocyst complex component 8; TAIR: AT1G10385.1 Vps51/Vps67 family (components of vesicular transport) protein; Swiss-Prot: sp|F4I4B6|EX84A_ARATH Exocyst complex component EXO84A; TrEMBL-Plants: tr|A0A1J7FYA8|A0A1J7FYA8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0572000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:110552790..110558873) extracted from Lotus japonicus Gifu genome v1.2.

CGGCGAGTCCCACTCCCTCGTGCGTATGCTTGGAAATGGAATGGCTGCATCACATGTTATGGTTGTCGCACTTTTGTTCT TCTGTCTCACATACACTAACATTTCCTATCAATCATATCAATGAATCTCACTCTCTTTATCATCACTTTCATTTCATCAA TGATTTCTTCATAGGAGGCAATTGAATTGATTTCAACATTTGCATTGCCTTGGAGACGAAGATAATGGATCAGTCACCAT TCACCACGCCGAGAGGGTCTATCTCATCAAGCGTAGGAGACCCTTTAGAACTGGAGATCAATCTCACACTCAGCGAAAAG CTCAAGGTTTTCAAAAGCTCCACCTTTGATCCCAATGCCTATGTCGCCTCCAAATCCCGCAGCATGAACGAGAAGGTCCC TCTCTCACACATTATATAAATTTCATTTCATGTTTCCATGCAAATCGGATAAATCAACATTTTTTTTATGATTGATCATG AAATTGTTGTTGTGCTTATAAGCAAAATTCATACTCCCTCCGTTCCTAAATAACTGATACTAATTTGGTTCTTTTTTTTG TTCCTATTTAACTGATACTTTTACAATTTCAAGAGAACATTAATGCTACTTTATCAATTGTGCCCTTCATTTATTGTTGG TAGGAAAATTGAAAAGTTAGAATTGATAAGAGAGATAGAGGATATAATAGGAAGTTAAATAGTAATTTTAGTAAAACAAG AATATTAATTGCTACTTCTTAATATTTGTGCCACAACCTTAAAGTATCAGTTATATAGGAACGGAGGGAGTACATAAAAA ACATTTAATATGTCAACTATGTTAGATGTTACTCCCTCCGTCCCTAATTATAAGCTAACATTGAGACTTTTTTTGTGTCA CTAAATATAAGCTAACCTTGCAAAAGTTAATATTTCTTTCCATATTCACCCTTGCATTTATTGGTAGTGGAGCACCACCA TTAGTAGTACAATGCTGAAAAAGTGTTATCATAAATAGGGGTAAACATAGAAAGTTGTACATTTTTTTTGAAAACCAATG AATCAATTAAGGCTTTCTTAATAAGTGTGATTTTTACAACTTTAGCTTATAATTAGGGACGGAGGGAGTAGTTCTTAACA CCCCGTTATTTGAGCTTATCTTATAGCATAAATGGTTATGCAAGTGTACCTGAGAGTTTATGTAATTACTTATGAGTTAT GACTAACCTATAAGCTGTTTTGAGTTTGTTTTCATGACGTGTTAATCTTAGCTTGCGAAGAAGAGTTCATGCTTATCTAT AACCTTTGTTCAGAGAGTTTCTCAAATTAGTTTATGAATAAGCGTTTATGCGATAAATGCTTATCCCCATGAGCAGCGCT TTAATTAAGCTATTTGCCTAAATACACTCATAATCCTAGAGGCATCAATTAAAAAATAAAAAGGTTCATCCTAGCAAAAG GTGCAGGAGAAGACTGGTTTCAGTAATTCTAACTCTCAAGAATTCAACTAATTTTGCTTGTTTTAAAAGTAAAAATATGA ATCATGATTTTGATTTCAATGCCAATGTGTTAGGCAGTGTGCCAAGTGCCAACTCTTGGTAAATGTCAGGTGGTTATGGA AGTTCTACTGAGTTTTTTCCGTTTGATTGAAGAAAACCTTCTGCCTTGTTTAATCCATATTTGTACTGTTTACAGGAGAT AAGACACTTGTGTGCTTATCTTGTTGACCTGAAGAAGGCTTCTGCAGAAGAAATGCGCAAAAGTGTTCTAGCTAATTACT CTGCCTTTATACGGTGAGTGTACACCCCAAAGTGTTTTTATGGATTTATCAATCCAGTGTCTTCCGGTTCAGAAGCTCAT TTGATTACAGATTGCATCATTTTGCACATCTCAAGTGGTTATATTATATGAAGTATGAACTAGCTAGGAAGTTTAGAAAC AGGTACTTGTGACATAGTTCTGTCATCATTTAACTTCTGGTGTGGGGATTTCTTAGGTATTCTTAGCTCCTTTCCCATGG TATATTGCATGAAAATTTGAGGCTAGAAAGCTACCAGTATTAAGCTCATAGGCTAGGAGTTTTTGTGTCATCCTTAATAC GGAATGCATTCTGAAAATATTTGACACTTATTCTTGGCAAAGTTGTAGAAGAGATAGTAGATGAGGAGAGGGAATAAAAA ACTGAGCTGGCTTGGAATTCTGTTGTACAGCTTTTTTGTTCTGCTAATATAAAATTAGCTGTGAAAATTAGTTGGATGGA AGAGGAATATAGATTCTGTTATATTGGTTTAATATATAAGATAGGATACTGTGAAGAAATTAGGCAAAATGTTGACTAAG AGCTTTAATTCATCTAGTTACTTTTGTACAAGTAAGTTGGCTTTCATTCTTCTGGTTAACTTTGAAAGATATTATTCGTA GTTTCATACTATTTGAACACAGCATTGTCCCAGATCTAGTAACGAAGTGCATCCTGTTTGTTTGCATTTAACTATATGTA TTTTCTATAGTTTAAGCTTAGAAACTTCAGCTTCTATTTATGTGCAGTACATCCAAAGAGATTTCAGATCTTGAGGGGGA GCTTCTTTCCATGAGAAATCTTCTATCCACTCAGGCTGCTTTGGTTCATGGTGTAGCAGACGGGTGTCAGCTTAGTTCCT TGATGACTGGAAACGAAGATTCAGACATGGACAATATACTAAATGAGAAAACAGATATATCCAAGACAGAAAAATGGCTA ATAGGATATCTAGAAACCCTTGAAGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCAATGGCTGCCTTGGACGAAGGAGA AAAAATGGCGCAAGAAATTAGTGAAGGGAGGACAACCTTGAGTCCAAGCTTATTCAAGGCATTGCAAGATGCCATCACTG AACACAGACAAAAATTAGCTGGTCAGCTAGCAGAAACTCTCAGCCAGGCATCAACGCGAAGCGCAGAAATTCGCTCAACG GCATTAGCATTGAAAATTCTCGGGGACGGTCCTCGTGCTCATACATTACTACTTAACTCTCACAAAGAAAAGTTGCAGCG TGGAATGCAGAGTATTCACTCCACCAGTTACGGCGGAGTTGGGGCATACACTTCTGCCCTTTCACAGCTTGTTTTTTCAA CCATTTCACAAGCAGCATCAGATTCTTTGACAGTGTTTGCCGAAGAAGAACCTGCATATACTTCTGAGCTAGTAAGCTGG GCAGTTACACAATCTGAGCATTTTGCTCTTCTCCTTAAGAAACGTATACTCGCATCAACAGCTGCCGCAGGAGGTTTGAG AATCGCGTCTGAATGTGTTCATGTTTGCTTGAATCACTGTCATCTGTTAGAGGCCAGTGGGATGACCCTTTCCCCTGTCT TACTAAAGCATTTTAAACCCTTTGTTGAGCAAGCACTTAACACAAATTTGAAAAGAATTGAACAAAGTAGTGCTGCACTG GCTGCTGCAGATGATTGGTTGCTTGCTTTTGCACCAACCAGCAGGAGTTCAGGCCTACCTCCAACCTCTTCCTATAGTAA CTTAAGTTCATTCCAGCCAAAGCTTTCAAGCAGCGCTCACAAATTCAACTCAATGGTTCAGGTGATTACTATTATGAGCC CATTTGGTTCCTGTTAGAAAGTATGAAAATGGAAAATAACACATCTCGAGACCCTTTTTGTTGAAGTAGCAACTTACTAT TTTAACAAAAAGTGCATCGATGTGTTATTTTCCCGTTTTCATACTTTCGCATCCAAACTGACTCTATATCTATTTTCATT TTTCAATGTTATCCCGGCTTGAAATATAAAGGCCATTTAGCATGATTTCACAAAATTTTTGAATTTGATAAAATCTCTAA GAATAGTAGAAAACTAATGCTAAGTGGCTTTTATTATTTCAAAAATATTAATGTTGACCATCAAAGTCAGGAAAGGCCAA CTGAGAATATAATGTTGTAAAAAAAGTTCATGAAGCTTCATCACCCCCCTCTCCTCCTCAATTTCTCTTTGCTTGAGATG CTTAATACAGTTTCCCATGGTCTGAACAGGAGCTTTTCGAAGATGTAGGACCTCTAGAAAGCCTGCAATTGGATGGTCTT GCATTAGAAGGCCTTCTACAAGTATTTGGCTTCTATGTCAATCTGTTAATAGATGCATTGCCAGCTTCAATTGTAACTGA GAACTTGGAAGGCTCAGGGCACAAAATCGTTAAGATTGCTGAGACTGAAGAACAGCAGATAGCATTGCTGGCTAATGCAA TATTGCTAGCTGATGAGCTGCTCCCGCGAGCCGTTGTCAAGCTTTCGCATAGCAACAGGGGTGATGAGTCTCAGAGAAGG GGGTCAGACAAACAAAGGCCTCCAGAACAGCGTGAGCTAAAGAAAAGGCTACAGCGCGAAGTTGATCGTCTGAGAGACAG TTTCTGCAGGCAACATGCTCTTGAACTCATCTTCACAGAAGAAGGGGACGCACTTCTGAATGCACTAATGTATTTGAGTA TGGATGATGGGAAAGTGGAGCAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGTAATATTTGTAACACAAAATATACTT CCTTTGGTGATATGTTGTTATGCCTTTGATTTGAAATTTTGAAGCAGTATAAAATATGTGTTCTCTTTAGTACTCAGATA CATGTGTTGATATAAGCATGGTCGTGTTTTTTGAATTCTAAGGGTTCTCATTCCTTAAATAATTGTTCAGGAGCTTTTTG GAAAGCTTACACGAGTGGCATACATTGCGACTGATGTGTTTGTGGGAAGGGATAGGTTTGCCACTGTTTTATTGATGAGA CTAGCGGAAACAGTGGTCCTGTGGCTTTCAGAGGACCAAGCCTTCTGGGAAGAGATTGAGACAGGCCCAACGCCTTTGGG TCCCCTTGGCCTTCAACAGGTAGTCACTTGAATGAGTTCATTGAGTATCACAGCCACTAGTTGAGAGTGATTCCAAATAA CTGTGAATTAAAGTTTCTCTATGCTCAATGAGCATTAGAAAGAACCTCTTTCAAAATTAACTTTTGTAGCCTGTAAAAAT CAATAAGGTTTGGTATAAACATTTTATAAGTTGGCTTTGAGAGCAATTGAGTGCTTGATCAAAGGACATCCAAATAGTAA AAATAAAAATGATAAATAAGGACAATATTCATTGTTATTTTGTAAAAAAAATAGTTGTTTTAATATTTCAAAAAGCATAG CTTCAAAACTATCCTCAAACAGAATTCCTTAATACACTACAGCTATTTTTAAACAGCAGTTTGTGGATCACGCACCTAAA ATGATATCAGACTCATAGATGATAATTTGTGCAGCTTTATTTGGACATGCAATTTGTGATGATATTTTCATCCCAAGGCC GTTACTTATCTCGCCATCTGCATCAAGCAATTAAAAACATCATTGGTAGAGCTATTGATGCTGTTGCTGCTACAGGGCTA GATCCCAACAGGTACATCTATCTAGATTGAAAGAACATGTGTTATATATTACTCTTAAATATCAATGGGAAACTTGTGCT TAGAGGCTTAGAGCTAGATTATATAGTACATTTTTGATGGAATCATCTATCTCTCTTATCTACTTGATACTGATTCAGAG CCTTTGAATGACAGTGTCTTACCAGAGGATGAGTGGTTTGTTGAAGTTTCCGAAATAGCTATAAAGATGTTAACCGGGAA AGCCGCCTTTGACAATGTAGAGGGAGATGATAATAGCCCCACCGCACTTGGCTAATTATAATTAGGCTTAAATATGTTGG AGGTCCCTCTAAAATAGGGGTCCTTTGGTTAAGGCCCCTACAAAATATTTTGGGTGGAATAAGCCCCAAATGTGAAAATA ATATATAGTGATAAGCCCCTGCCGTGAGGTTCCGTTTAATTTTTGATGATTCTGCAAACGGCGCTGACGTGGATTATATT TTTTGAAAATAATTAGGGTGCCACGTAAGTAAATTAGGGTTGAAAAGAATAAAAAAATAAAAACTCAAAAGTAAAAAACC CAAGTAAAATCCCCAAACGTACTTGGGTTTTTATTTTATTTTTATTTTTTTCAACCCTCATTTACTTATGTGGCACCCTC TTTA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0572000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATCAGTCACCATTCACCACGCCGAGAGGGTCTATCTCATCAAGCGTAGGAGACCCTTTAGAACTGGAGATCAATCT CACACTCAGCGAAAAGCTCAAGGTTTTCAAAAGCTCCACCTTTGATCCCAATGCCTATGTCGCCTCCAAATCCCGCAGCA TGAACGAGAAGGAGATAAGACACTTGTGTGCTTATCTTGTTGACCTGAAGAAGGCTTCTGCAGAAGAAATGCGCAAAAGT GTTCTAGCTAATTACTCTGCCTTTATACGTACATCCAAAGAGATTTCAGATCTTGAGGGGGAGCTTCTTTCCATGAGAAA TCTTCTATCCACTCAGGCTGCTTTGGTTCATGGTGTAGCAGACGGGTGTCAGCTTAGTTCCTTGATGACTGGAAACGAAG ATTCAGACATGGACAATATACTAAATGAGAAAACAGATATATCCAAGACAGAAAAATGGCTAATAGGATATCTAGAAACC CTTGAAGTTCTATTAGCAGAGAAAAGAGTGGATGAAGCAATGGCTGCCTTGGACGAAGGAGAAAAAATGGCGCAAGAAAT TAGTGAAGGGAGGACAACCTTGAGTCCAAGCTTATTCAAGGCATTGCAAGATGCCATCACTGAACACAGACAAAAATTAG CTGGTCAGCTAGCAGAAACTCTCAGCCAGGCATCAACGCGAAGCGCAGAAATTCGCTCAACGGCATTAGCATTGAAAATT CTCGGGGACGGTCCTCGTGCTCATACATTACTACTTAACTCTCACAAAGAAAAGTTGCAGCGTGGAATGCAGAGTATTCA CTCCACCAGTTACGGCGGAGTTGGGGCATACACTTCTGCCCTTTCACAGCTTGTTTTTTCAACCATTTCACAAGCAGCAT CAGATTCTTTGACAGTGTTTGCCGAAGAAGAACCTGCATATACTTCTGAGCTAGTAAGCTGGGCAGTTACACAATCTGAG CATTTTGCTCTTCTCCTTAAGAAACGTATACTCGCATCAACAGCTGCCGCAGGAGGTTTGAGAATCGCGTCTGAATGTGT TCATGTTTGCTTGAATCACTGTCATCTGTTAGAGGCCAGTGGGATGACCCTTTCCCCTGTCTTACTAAAGCATTTTAAAC CCTTTGTTGAGCAAGCACTTAACACAAATTTGAAAAGAATTGAACAAAGTAGTGCTGCACTGGCTGCTGCAGATGATTGG TTGCTTGCTTTTGCACCAACCAGCAGGAGTTCAGGCCTACCTCCAACCTCTTCCTATAGTAACTTAAGTTCATTCCAGCC AAAGCTTTCAAGCAGCGCTCACAAATTCAACTCAATGGTTCAGGAGCTTTTCGAAGATGTAGGACCTCTAGAAAGCCTGC AATTGGATGGTCTTGCATTAGAAGGCCTTCTACAAGTATTTGGCTTCTATGTCAATCTGTTAATAGATGCATTGCCAGCT TCAATTGTAACTGAGAACTTGGAAGGCTCAGGGCACAAAATCGTTAAGATTGCTGAGACTGAAGAACAGCAGATAGCATT GCTGGCTAATGCAATATTGCTAGCTGATGAGCTGCTCCCGCGAGCCGTTGTCAAGCTTTCGCATAGCAACAGGGGTGATG AGTCTCAGAGAAGGGGGTCAGACAAACAAAGGCCTCCAGAACAGCGTGAGCTAAAGAAAAGGCTACAGCGCGAAGTTGAT CGTCTGAGAGACAGTTTCTGCAGGCAACATGCTCTTGAACTCATCTTCACAGAAGAAGGGGACGCACTTCTGAATGCACT AATGTATTTGAGTATGGATGATGGGAAAGTGGAGCAACCTGAATGGTTTCCTTCTCCAATTTTTCAGGAGCTTTTTGGAA AGCTTACACGAGTGGCATACATTGCGACTGATGTGTTTGTGGGAAGGGATAGGTTTGCCACTGTTTTATTGATGAGACTA GCGGAAACAGTGGTCCTGTGGCTTTCAGAGGACCAAGCCTTCTGGGAAGAGATTGAGACAGGCCCAACGCCTTTGGGTCC CCTTGGCCTTCAACAGCTTTATTTGGACATGCAATTTGTGATGATATTTTCATCCCAAGGCCGTTACTTATCTCGCCATC TGCATCAAGCAATTAAAAACATCATTGGTAGAGCTATTGATGCTGTTGCTGCTACAGGGCTAGATCCCAACAGTGTCTTA CCAGAGGATGAGTGGTTTGTTGAAGTTTCCGAAATAGCTATAAAGATGTTAACCGGGAAAGCCGCCTTTGACAATGTAGA GGGAGATGATAATAGCCCCACCGCACTTGGCTAA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0572000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDQSPFTTPRGSISSSVGDPLELEINLTLSEKLKVFKSSTFDPNAYVASKSRSMNEKEIRHLCAYLVDLKKASAEEMRKS VLANYSAFIRTSKEISDLEGELLSMRNLLSTQAALVHGVADGCQLSSLMTGNEDSDMDNILNEKTDISKTEKWLIGYLET LEVLLAEKRVDEAMAALDEGEKMAQEISEGRTTLSPSLFKALQDAITEHRQKLAGQLAETLSQASTRSAEIRSTALALKI LGDGPRAHTLLLNSHKEKLQRGMQSIHSTSYGGVGAYTSALSQLVFSTISQAASDSLTVFAEEEPAYTSELVSWAVTQSE HFALLLKKRILASTAAAGGLRIASECVHVCLNHCHLLEASGMTLSPVLLKHFKPFVEQALNTNLKRIEQSSAALAAADDW LLAFAPTSRSSGLPPTSSYSNLSSFQPKLSSSAHKFNSMVQELFEDVGPLESLQLDGLALEGLLQVFGFYVNLLIDALPA SIVTENLEGSGHKIVKIAETEEQQIALLANAILLADELLPRAVVKLSHSNRGDESQRRGSDKQRPPEQRELKKRLQREVD RLRDSFCRQHALELIFTEEGDALLNALMYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRL AETVVLWLSEDQAFWEEIETGPTPLGPLGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAIDAVAATGLDPNSVL PEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPTALG
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR21426:SF15
10 755 746 0.0 –
PANTHER
PTHR21426
10 755 746 0.0
IPR033961
Pfam
PF08700
36 114 79 4.5E-12 –
SUPERFAMILY
SSF74788
144 380 237 7.32E-49
IPR016159
Pfam
PF16528
152 364 213 2.0E-19
IPR032403
MobiDBLite
mobidb-lite
529 552 24 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000145
Cellular component Exocyst A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals.
Subterm of
GO:0006887
Biological process Exocytosis A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0572000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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