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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0572300 |
| Transcript ID | LotjaGi1g1v0572300.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxo-5-alpha-steroid 4-dehydrogenase; TAIR: AT2G38050.1 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; Swiss-Prot: sp|Q2QDF6|DET2_GOSHI Steroid 5-alpha-reductase DET2; TrEMBL-Plants: tr|A0A1J7GLA8|A0A1J7GLA8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0572300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:110584366..110589698) extracted from Lotus japonicus Gifu genome v1.2.
TTATTGTAAAAAATAATTTAAAGTCGATAGGAACAATAAATTAAAATGTCGTTTTGGTCTTCTTACCACCTTTTATATTG AGATCTTGTTTCTTACTTCTTAGTCATCATCATCATCATCATCATCATCACAATTTCACACACTCCTCCAAGTCCAAGAC CAGCAGCATTCCCTCCACCATGGTTTCCGACGAGTCTCTCTTCCACTACGCTCTCCTCACTCTCTACCTCATGGCTCCAC CAACCTTCATCTCCCTCCGCTTCCTCCAAGCCCCTTACGGCAAACACCACCGCCCAGGTTGGGGTCCCAACCTTCCTCCA CCACTCGCATGGTTTCTCATGGAATCCCCCACACTCTGGCTCACCCTTTTCCTCTTCCCTCACGGCCAACGCTCCTCCAA CCCCAAATCCATCCTTCTCATCACCCCTTTCCTCCTCCACTACTTCAACCGCACCTGCCTCTACCCACTTCGCCTCCTCC GCGCCCCTCCGGGAAAAACCGCATCTGGGTTCCCCTTAAGCGTCGCGCTGATGGCTTTCGCCTTCAACTTGTTGAATTCT TACATTCAGGCCAGATGGGTATCTCACTATAAGGACTATGATCATGATGGGTGGTTTTTCTGGTGGCGGTTTTTTTGTGG GGTTTTGGTGTTTTTGTGTGGAATGGGGATCAATGTTTGGTCTGATAGGGAGTTGTTGAGGCTCAAGGGTGAAGGGAAAG GGTATGTGGTGCCTAAGGGAGGGTTGTTTGAGCTTGTGACTTGTCCAAATTACTTTGGGGAGATTGTGGAGTGGCTTGGA TGGGCTTGGATGACTTGGTCATGGGCTGGACTGGGCTTCTTCATCTACACTTTCGCGAACTTGGGGCCCAGGGCACGCGC GAATCGGCAATGGTATTTGGAGAAATTTGGGGAGGATTATCCAAAGAAAAGGAAAGCTGTTATTCCATACTTGTATTGAT TTTGTTTTCTCTCTGGCTTGTCAGGGGATACAATAGTTTGGATGTGTTGCTGAAGCATTGCATTGCATTGCAGCAAAACT TGGTTTATGATGTGAAGTTGCATAATTGAATTGGTATGATTCTAAGGAGTTTTACCCCCTTCTCAAGTGTCCATTTTATA TTATTATGTGTTGCTTAGAGTTGACTACTTGATGAATATGCACCTTAAAATCTTTTTTTATATCTGCTGATTGCGGGGAG TTATTTGGGACGACAAAGGAGATTGGGTTATGGGTTTCTGCAATAACTTGGGCACCACTAATCCTCTGCTTGCAGAGTTG TGTGCAATCTGGTCTGGGGATCCAATTTATTATGGACCATGATTTCCCACTTGTGATCACTGAAAGCGACTCATCGGAGA CCATTTAGTTGGTTTCATCTGTTTTCGAGCAAGACCATCCCTATGTGGACATTATTGGAAATATTAGGCATGGCCTTTCT CTTCATGGAGGCATTGAACTCTCCCACATTTCAAGGGACTTTAATTTAGTTGCAGATTGGCTAGCTAGGGCGCCTCTGCT TTTGCTTTTTGGGGTGCATGTTTTCCCCTCCCCTTTTGATGGATGCCATTGGTTGCTTAGGATTGATGTAGGAGAGGATC TGTCCTCTTGGCCGTTTGAGCCAGGTGCTTAGCTTGTTTTCCCGACCCCGTTATGTTACAAAAAAAAGAAAAAAAAAATG GTGTGCAATAGATTTGTTAATGATGAAGATTAATGTTTAGGATTTTCATCATGAGGCATATCATTATCTTATAACTTATT AATGTTTAAGATTTTATCACTTGTGGGTGTGGCTCTGAGTTGCTATCCTTACTAAGAGGAAGAAAGGAACCTTTATAAGA AATGAGAACATTTGTGATTTTAGCTGTGGAGAGGTGCAGGGAACATCTTTCATTTGTAGTAGGTACTTACAAGTGAGAAC ATCTGATGTGGGTGTGGTATGGATTGCTATCCTCAGGGAGAGGAAGCAATAATGCGCTGGAAGAGAACATCTTTGATTTG TAGTAGGTGCTTGGAACTGGGAGATGTGACTCACAAGGGCATGTTTAAGCCTTTTTGACATGAAAAAGAACTTACCTGTA ACCTATGTCCAGTAATTGCTGGTTATACTTGCTGCTTACGGAGCAAGGAATTCCAGATCATCAAGTTTCTTGGAAATCGC ATGGCTAAACGTAACCGGTGCATTCGCCAGCAGAGAAAAGGGAGATGAAGACATAGCTGCAGGCAGCAAGAGGAGTTACA TGCTCTGGCTGCGATCGAGAAGGAGGAGGCGTCATGTTCAACTTCTTCTGTTTCGCAATGAACTGAGGTTGCTCAGTTGA AGGTTGTGGATCGCTAGAATTCATGATTTTCTGATGAGAAGAGTGAGATCAATTCCGATTAGGAGAAGGCTCTTGATACC ATATTACGATGAGAGAGAATTTGAGAAAAGTTGTGTGAGTCTGAGAGAGAGGGAGTGAAGACTCTCAGTTGTTCACTGAA TGAATCAGATCAGTACAATCACTAATAGAGAGTTAGTAAACTCTGACAGAATAATTAACTTCTGACAACTAACAATAACT GAACATAACAGACTAAGGATTCTAAGTAATCTTGTACAGACAAGTGTATGATAAGACTCTACAATCTACACTAACTGAGA GTATACTAACACTATACTCCAATAATCTCAATCATTTATAACTAACTTCCTAACTTTCTGGGGTTGGGAGGAGGGGGGGG GGGGTTATCCCTCCAAAATCCTCTTATTTCTTCTCCTATACACCTTACCGATAGGTGGTTTATGTCTATCACAAAAGAAA GCAATGGAAGATTCAGTGCTTGACATGGTTTGCCACCTCTTGCCTTCATCCACGGAAATGCCTGAACTCAACTATTTTCA TTAAAGATTACAAGTTTTCCGGACAAACTAGAGTCTCCCACTCAAAAGTTATACGGAATGATAACATTCACTCACAAGAA ACTCTCCCTCATCACTCCAACTCACTTCTCTTCTGCTTGGGATACATTCTCTCTTCACACTACTACTCCTTTCAGCTTGG ATGGTACCTTCTTTCACATAACCCCCTCTTTGACTTGTTCTCTCTTTGTGTATCCTCTATATGTAGAGGTGGTGAGTGGA TAAACACTTACTAATTAGTCCCTACTTTTCCAAAAGTTATCACCTTTGAGAATTGTTATCTCCTGTCTCCATCATCGGAA GTTGATTAAGAGTTTCTCAATGGTCATTATTAAATTCCAATCAACGGTCTACAATGTCTTTGAGTTACTCACTTGCATTA ATTTGAATTGCCTTCTTCAAAAGTTGTTGTTGACATCTTTGATGGGATAATCCCCCCCCCCACCTCCCAAAAAAAGCCTC CCTTCTCTATATGTGAAACATTGTGGAAACTGGAAACGTTGTTGATTTGATATTTGAATTTTCATTATAAGTTGTTCTTG CCATAAGGGCTAAAAACAGAGTGAGCCATTCAAAGATCCCTCTGCTGCTTGCTCTTTTTACCATCTATTATATTGTAAGT CTTATCTTTTTTTCTTTTATCCGTTTTGCTATTTTCATTGCAGTTGTATTTGAAGTTGTGATGAATATAAGACAATCTAT ATTTGTCCCCTAGTAATAACACACGATATGTACATTGGAATAGGTAAAAGATGTCTTGGTCCTTAATGTGGATTTGGCAG TTGAGAGATCTTTCTGCTTCCGGAGGTATGCCCTCATACATAAGTATACATCAGTTTTTCTAATATTTTGCCTTTGTTGC TTAAATGCAAATTATTTATCCCATTTATGTCTCCAAAGTTTAGTGTTTTTGTTCAAATAATGTAGATTACAGTATCTCAC TAGTAAGCATGTACTGTACAAGGTAAATTGTATAACAAATAATCTACAAGGATTCTTAGAAGTGCAGATCATACACTTAT CTACTATTTGTGCACTTCTGCACAAAATTTCCAATTTTCACATTCCTTTCATTATGCAATGTGTGGTTGTTGAAGTTATA GGGTTTTAGATAAGGAGGAAGTGAAGAGAAAGTATAAAGACTTTGAATTGTGATACTGTTTTTACGAAAAAGATAAGCAT TAATTCTTATTCATCCTAAGTCCTAACACTGGATTCTCATTACTAATAACATAAGAAAACTAATGGCTTAAATATGTTTT TAGTTCTGATATTTATGAGTTTTTGGTTTTTAGTCCTCCCCCATCTACTTTTTATGCTTTGTTAGCCTTATTTTTTAAGA GTAAACTATTTTAGTCCCTACAGTCAACAAACCTCTGTTAAATATTGACGTGTCAAACAGAATGCCATGCTGTCATTACC ACCTGTGCACTAATATGTCTCAGCTCCTCACCTGTGATTGTTCCTCGGCAAACAGCTCCTGGTAAAATTTTGTAGTTGGG AGAGAAGAACACACCGAGTAGTGCGTGTAGGAAACTCAACAGAGAGCAGAAGAGCAGAGAGCATGTTCGTCAATGACGAT TAAGCAGTGGAGCTCAGAAATCTGCGGAGGACAACATACAAATGAATGGCTAGGGTCTCTCCACATGACAACTTCTTCCC TTCCGAAACACGCTTCTCACACGCCCCTTCACCAATACTCATTCTCCCCAACACTTTTTCAAGATCCATGGTGGCTCGAT GGAGGAGGAGCTCATGAAATCAACTTGATGGCCAAATCTGTCAGGGATCCCATAATTGTCTTCTTGTACTTTCCTTCTAA TTCCTTTTTCTTTTGTCTTGCATTCTCATTAAATTTGCACTGGCTTGAATTTTCAGATGATGAGAATTGGAACTCAAGAA GGTGGAGATCATCGATGCACTATTGTTTTACTTATCTTATGTTGTTGGCTGTACCCTTGTGGACTATGGGCATTAATTCG AACTTCTTGGTTTATTGGTTGAGGAGCAATTTTGATTCTTTTTATTAGTTTTAACTATTTATTTGCCACGAATTGTAGAG TAAAATTAAAATAAACTAACCCACAATGACTTATGGGAATAGGATGAATAGAGGAACAATCATAGGTGAGGTGATTTACA ATTTCTGAAACTCTCAATTCTCTCCTTGAACCTGATTTCTCTTTCTATTATGGTATCAAGTGCTTGCATCGATCCCTAAA CCATGTCTTCCACAAATAAACCTGATCATCTTCCTTCTGGAGAAAATAGGCTTTCAACCAATGCTCTGATCACATTCTCT AATTTAATTTAATTTAACTATTAATTAAATATGAAGAAACTAAAATTTAGTTAAAAATGACTCACGTGTCCATGTCAGCT CTAGCCGGCCACTAGGCAAGGTCCTCAGAGCTCCATCCTCCGGATCATACCCG
CDS sequence (LotjaGi1g1v0572300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCCGACGAGTCTCTCTTCCACTACGCTCTCCTCACTCTCTACCTCATGGCTCCACCAACCTTCATCTCCCTCCG CTTCCTCCAAGCCCCTTACGGCAAACACCACCGCCCAGGTTGGGGTCCCAACCTTCCTCCACCACTCGCATGGTTTCTCA TGGAATCCCCCACACTCTGGCTCACCCTTTTCCTCTTCCCTCACGGCCAACGCTCCTCCAACCCCAAATCCATCCTTCTC ATCACCCCTTTCCTCCTCCACTACTTCAACCGCACCTGCCTCTACCCACTTCGCCTCCTCCGCGCCCCTCCGGGAAAAAC CGCATCTGGGTTCCCCTTAAGCGTCGCGCTGATGGCTTTCGCCTTCAACTTGTTGAATTCTTACATTCAGGCCAGATGGG TATCTCACTATAAGGACTATGATCATGATGGGTGGTTTTTCTGGTGGCGGTTTTTTTGTGGGGTTTTGGTGTTTTTGTGT GGAATGGGGATCAATGTTTGGTCTGATAGGGAGTTGTTGAGGCTCAAGGGTGAAGGGAAAGGGTATGTGGTGCCTAAGGG AGGGTTGTTTGAGCTTGTGACTTGTCCAAATTACTTTGGGGAGATTGTGGAGTGGCTTGGATGGGCTTGGATGACTTGGT CATGGGCTGGACTGGGCTTCTTCATCTACACTTTCGCGAACTTGGGGCCCAGGGCACGCGCGAATCGGCAATGGTATTTG GAGAAATTTGGGGAGGATTATCCAAAGAAAAGGAAAGCTGTTATTCCATACTTGTATTGA
Protein sequence (LotjaGi1g1v0572300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSDESLFHYALLTLYLMAPPTFISLRFLQAPYGKHHRPGWGPNLPPPLAWFLMESPTLWLTLFLFPHGQRSSNPKSILL ITPFLLHYFNRTCLYPLRLLRAPPGKTASGFPLSVALMAFAFNLLNSYIQARWVSHYKDYDHDGWFFWWRFFCGVLVFLC GMGINVWSDRELLRLKGEGKGYVVPKGGLFELVTCPNYFGEIVEWLGWAWMTWSWAGLGFFIYTFANLGPRARANRQWYL EKFGEDYPKKRKAVIPYLY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| PIRSF | 1 | 259 | 259 | 4.2E-92 | ||
| PANTHER | 3 | 259 | 257 | 5.6E-102 | ||
| PANTHER | 3 | 259 | 257 | 5.6E-102 | – | |
| Phobius | 7 | 29 | 23 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 30 | 48 | 19 | - | – | |
| TMHMM | 49 | 66 | 18 | - | – | |
| Phobius | 49 | 66 | 18 | - | – | |
| Phobius | 67 | 77 | 11 | - | – | |
| Gene3D | 76 | 258 | 183 | 8.5E-6 | – | |
| Phobius | 78 | 97 | 20 | - | – | |
| TMHMM | 78 | 100 | 23 | - | – | |
| Phobius | 98 | 108 | 11 | - | – | |
| Phobius | 109 | 126 | 18 | - | – | |
| TMHMM | 110 | 129 | 20 | - | – | |
| Pfam | 111 | 259 | 149 | 2.5E-50 | ||
| Phobius | 127 | 146 | 20 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 147 | 167 | 21 | - | – | |
| ProSiteProfiles | 154 | 233 | 80 | 27.626 | ||
| Phobius | 168 | 204 | 37 | - | – | |
| Phobius | 205 | 226 | 22 | - | – | |
| TMHMM | 207 | 229 | 23 | - | – | |
| Phobius | 227 | 259 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | 3-oxo-5-alpha-steroid 4-dehydrogenase activity | Catalysis of the reaction: a 3-oxo-5-alpha-steroid + acceptor = a 3-oxo-delta(4)-steroid + reduced acceptor. | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. | ||
| Biological process | Steroid metabolic process | The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0572300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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