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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0578400 |
| Transcript ID | LotjaGi1g1v0578400.6 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J3|K7L1J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:111805691..111811691) extracted from Lotus japonicus Gifu genome v1.2.
TTTGATATAGTTCTACAATTAAACATTTATTTATTTTGCAATACTTGAAGGTTGGAACAGCTGTGGTTACTCGAAGTGAT GGAAGATTAGCATTGGGAAGAATAGGAGCTCTCTGTGAGCAGGTAAAGGCATAAATCTTTTAGCACAAATCTAAACTTAT ATCTTAATGGCAATTAAAAATCACGGTAGAGCAAAATCCAGTAAGATGCCACATTTTATTCCATATATTTTTTAATTTAA ACATGAAGGGATTCATAAATTAAGGGTAATTAAGATTTATAGCTGGAGTATTTGCAACTAAATCATTGTTCTGCTTTGCT CTAGTCTTGTTGAAGATGAATGGTAGGTAGTTGTACATTACAAAAATTACATGTGTTCGATATTCCTCACTGGTCATGTA ATTTTTGTTGCATCTGAAAGTGATCATCCTTACTGCAGCTTAAAGAACTAAATATGAAGGGGTATGAGGTTATATTGGTG ACTTCAGGTGCAGTTGGTCTTGGCCGCCAAAGACTAAGATATCGCAGATTAGCCAATAGCAGGTTTTTGTTCTTTCTCTT TTGCTATAGTTGCTGGACATTTTTAAAAGGCATGAATCCAAGTTTCAAATAATAACTTGTTCTTGATTTCATTACATCTG TTCGTAAAAATTGCTATTAGTTCTGATGGTAGTGATGTTCCGAAAAATAGTATTTTTTTTTCGTAAGCAATAGAAATGTA AAGAAAAACAAAAGTAAATGATTTGATCTTTTCATCAGATCAGCAGAACAAAAACTAGTTATTGTGCAAACTTTTTGCAA ATCAAGAAGTAATTCAAGTTTTTCATTGTTCACTCCAAGCTTGCTTCCTTTTTCTGATTTGTTTAACTATGAATAAACCA GCATAGCATTGAAATTTGAAAGATCTTGTGCGAATTTTTCATGGTTCTGTTGACATGAGGTAGAGTTTGAGCGATAGAGG ATGAAAATAATGAGCTTGAAATAAAGTGTCTACTTGTTATGCAGCTTTTCTGATCTTCAGAAGCCGCAAGGAGAACTTGA TGGCAAAGCATGTGCAGCTGTTGGGCAGAGTAGTCTCATGGCCCTATATGATATCATGTTTAGCCAGGTGCTAACAAAAT TAAGTTTTTGATTAAATATGTCCCGAATCTTATATATGTATCTGTTGCAATAATCCATTAACATGTGTTTATTAATCTGC TTGTATCTCCTATCTATATTGATGTTAATATGTAACTTTCCTGGTGCAGCTTGATGTGACTTCATCCCAACTTCTAGTGA ATGATGGGTTTTTTAGGGATACAGGTTTCAGAAAACAACTATCAGATACTGTGAACTCATTATTAGATTTAAGGGTTATC CCCGTTTTCAATGAAAATGATGCTGTTAGTACTAGGAAGGCACCATATGAGGTATGAACCTTATTTTTTGTTTTTGAGAA AACTTTTTCTGCTTAAAATGTATTAGTTTTACTTTAGTGGTTTTGTGACATAATAATCTTCTCTTGCGAGCACTGTCTGC AGGATTCTTCTGGAATATTCTGGGATAATGACAGCTTGGCTGGTCTATTGGCTCTGGAACTTAAAGCTGACCTCCTTGTT TTATTGAGTGATGTTGAGGGCCTTTACAGTGGCCCTCCAACTGATCCAAAGTCAAAGTTAATTCACACATATGTAAAAGA AAAACATCAAACAGAAATTACTTTTGGAGACAAGTCAAGATTGGGAAGAGGTGGTATGACTGCCAAAGTTAATGCTGCTG TTTGCTCTGCCTATGCTGGCACACCTGTGATTATTACTAGGTATCTTCGGTTTTATTTCACTAAGCTATTACTGATACCG TGAGTAAAGTATTGACCTAAAAATAAATATTCTTGAATTCTATTTCAACCTCCTTTGCAGTGGCTATGCAACAAATAACA TCATGAGAGTGCTTCAAGGAGAAAAAATTGGTACTGTCTTTCATAAAGATGCTCATATGTGGACCAGCATAAAGGAAGTG AGTGCACATGAAATGGCAGTTTCCGCACGTGATAGTTCTAGAAGACTTCAGGTAATTAAGGTTACATATTTGGAATGTTA AGTGCAAGGTTTACTGTCGTAAATTTCTTCAAGTTGGAATTTAACTTTAATTTCGTTTTTGGTTGTTGCCAACGTAATGA GCTCAGATAAGTTGTTTCATTTGTATATTGGTGCTTTTGGCTGCAGATTCTAAATTCTGAAGAGAGGAGGCAAATATTGC TAGATATGGCTGATGCATTAGAGAATAATGATAGTATGATAAGGCTTGAGAATGGAGCTGATGTTGCTGATGCAGAAGAG GCTGGATATGAGAAATCATTGATATCACGTTTAACCCTGAGACCCGAAAAGGCAAGAACTTTATTAGTTACCATCTGACA TGAATTACTGAAAGATGATTTGCTCAGCATTCTGATTTGCTCACTTTCCACAGCAGGCTTCCTAAAATTTTCTCATTTAG TGAGCATGTTTTTATCTAACCTTTGTTTTTGGATTTTCAGATGTCTAGTCTTGTAAAGTCTGTTCGCATGCTGGCAGACA TGGAAGAACCCATTGGTCAGATGATAAAGAGAACTGAGGTCAAAACCCCCTAAATAATCATGTCATTGACCAGTTATTAA ATAACACGTGAAATTGGTTCTGTGATATTGTAAAATATTCGACAGTTTTCATTTTTGACATATTTGAACAATGTAACATG TTTCCAACAATGATTTATGCAATTATGCTATAGGAATTTCAGGAAAGTGATAATGTTATGAAAACTTGCATTCCATCGTT CAACATTCATTTTGATAGTTCTGATTACTTCTCTGTTTCCAGCTAGCAGATGAACTCATCCTGGAGAAAATATCATGTCC TTTGGGTGTATTTCTGGTTATATTTGAGTCTCGGCCTGATGCTCTTGTTCAGGTTAAGATAATTCCTTCTCAATTCTTAC CAACATCAGCATTAATTAAAAATCAGAGCTCCAATATTTTAATTTTTGACTTATGATTCTGAAATTTATACAAATTTGTT AAGTTTATTGAATATTAATCTTTAAGATTACTGTTTGAATTTGTTAATAGATAGCTGCATTGGCAATAAGAAGTGGAAAT GGTTTACTGCTTAAAGGAGGAAAGGAAGCCAAACGGTCAAATGCAGTCCTACACAAGGTTTATTTTACTTGATGAATGCA AATCAGAACTCTGTTGTTTCTTTGCCATATTTTTAAGTTTACTATTAATTTTTCCTCTTTAACTTCTTCATTATTGTAGG TCATTACATCAGTTATTCCTGATAAAGTTGGTAACAAACTTATCGGGCTTGTAACTTCAAGAGAAGAAATTCCAGATCTG CTCAAGGTGGATGATACTACAAGTAAAATTCCTAACCTCTATTTGTCTGAGATTATTTTCAACTAATTAAACTCTGTCAC AGCTTGATGACGTGATAGATCTTGTGGTCCCTAGAGGCAGTAGTAAACTTGTTTCTCAAATCAAGGCTTCAACAAGGATT CCTGTTCTTGGTCATGCTGGTAATAAAAGCATTTAAGTTTCCTATTTTTATGAATTAAAAGCATTTAAGTTAAAATTATA AAAAAAACGATTCTATTAAATTTTTATGTTTGTCATGCAGATGGAATATGCCATGTATATGTTGATAAAACAGCTAATAT GGATATGGCAAAGAAGATTGTTAGGGATGCAAAGGTTGATTATCCTGCAGCATGCAATGCAATGGTAATTACAATTCACA TTCTCTGCAATGCTCCGACCAGGGCATCATCATCTACATCCACATCTCCTTTTGAGTTTTCTTCATTTTCTGTTCAAGAT GTGAATTAAATCTATGAACTTTGCTCATTACGATATTCTGTCCTGATTTTCTTAGGAAACCCTTCTTGTACACAAAGATC TATCAGAAAATGGTGGACTTGAAGAACTTGTTGCTGAACTCCAACGTGAAGGTTTGACCTTAGTTGCAAAATAACTTACA ATGAATGAAACATGCATTAATTGGAACTTCTTATTCTTTTTCAATACTTATTAGCTTCATCTTTAGCACCATTTAAATAA GTAGTTTTGACATATTAGTTTTACTGATGTCCATTTGCTTTCTTCTAACTCAATTTTGATTCCAATCCAAATGTTGAAGA ATTTATAGGAGAGATAAATTGTTTGACTAAATGTCTACATATATCTTGAAAACCAAAATTACATTTTGAAAATAAGGGCA ATATAAGTAAATTTGTTTTAAAATCTCACCCCACCTAAACCAAATAAGAAGTGGTTTATTTCCCCTCCCTTCGGCCTCCC TCCGCTCCCTTTGATCAAATACGATTGCTAGGACATGAATAACTGGAAAAACGTGGACAAATGGAAATAACGCAAGCTAA CAAATTGGGAAATGAGGAAATCAGTACCTTGATTCTGAGCTCAAATGTCAAATTATCTATTTTCAGGTGTTCAACTATAT GGTGGATCAAAAGCTAGTGCCTTGTTAAATATCACTGAAGCAGACACTTTTCATCATGAGTATAGTTCACTGGCTTGTAC AGTTGAAATTGTAGATGATGTATCTGCTGCCATTAACCACATACATGAACATGGAAGGCAAGTTTTGGTTCACTTTCAAA AACTATGTTTTGAATTTTGATGCTATATATCATGAACATTGTTCTCTTAAAAGTCTCTGTCTTTCTTTCCTTTTTCTGCA GTTCTCATACTGAATGCATTGTTACAGAAGACTGTGAAGTTGCTAAAACTTTCTTAAGTCAAGTTGACAGGTAAGTGTAG ACTTTTCACAGCAGCGTTGTTTGATCCTTTGCCCAGTTCCTAGTTCTAAAAGATACTAAACTAGCATGATGATATGTCAG TTTACTTCAAATGCCTGCTGTGATTTGTCTGAACCACAAACCTGTACATTCATTAATATTGGATTAATATTTTCCCCAAC ATCTAAGTCTTCATGTTCGGCGCTTTTCATGAGTTCCATCAAGATTGTAATGCAAGAATAAAACAATAAATCAGAAGATA TTACATGCATTGGGGGAATTGAACTTAAGATCGTCACATATGTTGAACTTGATTACCATCAACAGAACAAACTTTGTAGG GTGAATTACAATATTGATAGATCAGTGCATATCAAGGTGGATAAGGTCAAGGCTTGATCGGTAGGAAGATTATTACTTCT TACTTAATCCTCTAAACTAATCATAGAACTTCTGAGGATCATAATGTATTTTTCTATCCTTTATCTCCACCTCTGCGTTT CTACCTTCACATCTAGTCCTGAATGAATTGCTTCTTCAAAGTCTTCGACTTTACCTCTTACGCGCATTGACGACCCGTAC TATATTTCATTTGGACATAATTACTTTAACATTTAAATAGAATTCATGCTTCTATGTCTTTCAAGTTTTCTACATTTTTT TTTGTTTTTAACTTGATTTTGCTGACTGTTGAATATGGATTTTTGCCTGATGCACAAATAGTGCTGCTGTATTCCACAAT GCAAGTACAAGGTTTTGTGATGGAGCACGCTTTGGGCTTGGTGCAGAGGTAGTGCACTTTCCAAAAGCACATTGTGCTAA TAGCAGCACTGTAATTCATGTTTTTTCAACTTTCTTTGATATTCATTGTTGTTCAGGTTGGAATAAGCACAAGCAGAATT CATGCCCGTGGCCCTGTAGGAGTTGAGGGGTTATTATCAAATAGATGGTACGAAATTATGCAATGTCTTAGTTTGTATTA TTAAAAGAAAAAACACCAAGTGAACAAACTTTTACAACTATTAATAAAATTGCTAGAGTTGTGCTTGAACATTATTTAAT ACGTGAATGCTATTTTACCATCAAGATTATGACTTCATACATTTTCTGTTAGACTAAATCTTACCTTGAAATAATGCAGG ATATTGAGAGGGACGGGACAAGTGGTAGATGGCGATCGAGGGGTCACTTATACTTACAAGGAACTGCCAATAAAAGCATA A
CDS sequence (LotjaGi1g1v0578400.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGGTATGAGGTTATATTGGTGACTTCAGGTGCAGTTGGTCTTGGCCGCCAAAGACTAAGATATCGCAGATTAGC CAATAGCAGCTTTTCTGATCTTCAGAAGCCGCAAGGAGAACTTGATGGCAAAGCATGTGCAGCTGTTGGGCAGAGTAGTC TCATGGCCCTATATGATATCATGTTTAGCCAGCTTGATGTGACTTCATCCCAACTTCTAGTGAATGATGGGTTTTTTAGG GATACAGGTTTCAGAAAACAACTATCAGATACTGTGAACTCATTATTAGATTTAAGGGTTATCCCCGTTTTCAATGAAAA TGATGCTGTTAGTACTAGGAAGGCACCATATGAGCACTGTCTGCAGGATTCTTCTGGAATATTCTGGGATAATGACAGCT TGGCTGGTCTATTGGCTCTGGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGTGGCCCT CCAACTGATCCAAAGTCAAAGTTAATTCACACATATGTAAAAGAAAAACATCAAACAGAAATTACTTTTGGAGACAAGTC AAGATTGGGAAGAGGTGGTATGACTGCCAAAGTTAATGCTGCTGTTTGCTCTGCCTATGCTGGCACACCTGTGATTATTA CTAGTGGCTATGCAACAAATAACATCATGAGAGTGCTTCAAGGAGAAAAAATTGGTACTGTCTTTCATAAAGATGCTCAT ATGTGGACCAGCATAAAGGAAGTGAGTGCACATGAAATGGCAGTTTCCGCACGTGATAGTTCTAGAAGACTTCAGATTCT AAATTCTGAAGAGAGGAGGCAAATATTGCTAGATATGGCTGATGCATTAGAGAATAATGATAGTATGATAAGGCTTGAGA ATGGAGCTGATGTTGCTGATGCAGAAGAGGCTGGATATGAGAAATCATTGATATCACGTTTAACCCTGAGACCCGAAAAG ATGTCTAGTCTTGTAAAGTCTGTTCGCATGCTGGCAGACATGGAAGAACCCATTGGTCAGATGATAAAGAGAACTGAGCT AGCAGATGAACTCATCCTGGAGAAAATATCATGTCCTTTGGGTGTATTTCTGGTTATATTTGAGTCTCGGCCTGATGCTC TTGTTCAGATAGCTGCATTGGCAATAAGAAGTGGAAATGGTTTACTGCTTAAAGGAGGAAAGGAAGCCAAACGGTCAAAT GCAGTCCTACACAAGGTCATTACATCAGTTATTCCTGATAAAGTTGGTAACAAACTTATCGGGCTTGTAACTTCAAGAGA AGAAATTCCAGATCTGCTCAAGCTTGATGACGTGATAGATCTTGTGGTCCCTAGAGGCAGTAGTAAACTTGTTTCTCAAA TCAAGGCTTCAACAAGGATTCCTGTTCTTGGTCATGCTGATGGAATATGCCATGTATATGTTGATAAAACAGCTAATATG GATATGGCAAAGAAGATTGTTAGGGATGCAAAGGTTGATTATCCTGCAGCATGCAATGCAATGGAAACCCTTCTTGTACA CAAAGATCTATCAGAAAATGGTGGACTTGAAGAACTTGTTGCTGAACTCCAACGTGAAGGTGTTCAACTATATGGTGGAT CAAAAGCTAGTGCCTTGTTAAATATCACTGAAGCAGACACTTTTCATCATGAGTATAGTTCACTGGCTTGTACAGTTGAA ATTGTAGATGATGTATCTGCTGCCATTAACCACATACATGAACATGGAAGTTCTCATACTGAATGCATTGTTACAGAAGA CTGTGAAGTTGCTAAAACTTTCTTAAGTCAAGTTGACAGTGCTGCTGTATTCCACAATGCAAGTACAAGGTTTTGTGATG GAGCACGCTTTGGGCTTGGTGCAGAGGTTGGAATAAGCACAAGCAGAATTCATGCCCGTGGCCCTGTAGGAGTTGAGGGG TTATTATCAAATAGATGGATATTGAGAGGGACGGGACAAGTGGTAGATGGCGATCGAGGGGTCACTTATACTTACAAGGA ACTGCCAATAAAAGCATAA
Protein sequence (LotjaGi1g1v0578400.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGYEVILVTSGAVGLGRQRLRYRRLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDIMFSQLDVTSSQLLVNDGFFR DTGFRKQLSDTVNSLLDLRVIPVFNENDAVSTRKAPYEHCLQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGP PTDPKSKLIHTYVKEKHQTEITFGDKSRLGRGGMTAKVNAAVCSAYAGTPVIITSGYATNNIMRVLQGEKIGTVFHKDAH MWTSIKEVSAHEMAVSARDSSRRLQILNSEERRQILLDMADALENNDSMIRLENGADVADAEEAGYEKSLISRLTLRPEK MSSLVKSVRMLADMEEPIGQMIKRTELADELILEKISCPLGVFLVIFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSN AVLHKVITSVIPDKVGNKLIGLVTSREEIPDLLKLDDVIDLVVPRGSSKLVSQIKASTRIPVLGHADGICHVYVDKTANM DMAKKIVRDAKVDYPAACNAMETLLVHKDLSENGGLEELVAELQREGVQLYGGSKASALLNITEADTFHHEYSSLACTVE IVDDVSAAINHIHEHGSSHTECIVTEDCEVAKTFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG LLSNRWILRGTGQVVDGDRGVTYTYKELPIKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 243 | 243 | 1.1E-66 | ||
| PIRSF | 1 | 672 | 672 | 0.0 | ||
| Pfam | 1 | 215 | 215 | 8.6E-25 | ||
| SUPERFAMILY | 2 | 237 | 236 | 3.53E-42 | ||
| TIGRFAM | 2 | 671 | 670 | 0.0 | ||
| PANTHER | 2 | 672 | 671 | 0.0 | – | |
| PANTHER | 2 | 672 | 671 | 0.0 | – | |
| PRINTS | 3 | 17 | 15 | 1.0E-55 | ||
| PRINTS | 47 | 75 | 29 | 1.0E-55 | ||
| PRINTS | 87 | 108 | 22 | 1.0E-55 | ||
| PRINTS | 130 | 157 | 28 | 1.0E-55 | ||
| PRINTS | 189 | 209 | 21 | 1.0E-55 | ||
| Pfam | 247 | 524 | 278 | 2.7E-7 | ||
| Hamap | 249 | 655 | 407 | 33.908 | ||
| SUPERFAMILY | 251 | 654 | 404 | 7.15E-93 | ||
| CDD | 252 | 651 | 400 | 0.0 | ||
| Gene3D | 257 | 652 | 396 | 3.9E-153 | ||
| TIGRFAM | 257 | 644 | 388 | 7.3E-136 | ||
| Coils | 266 | 286 | 21 | - | – | |
| Gene3D | 467 | 613 | 147 | 3.9E-153 | ||
| ProSitePatterns | 562 | 583 | 22 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Glutamate-5-semialdehyde dehydrogenase activity | Catalysis of the reaction: L-glutamate 5-semialdehyde + NADP(+) + phosphate = L-glutamyl 5-phosphate + H(+) + NADPH. | ||
| Biological process | Proline biosynthetic process | The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0578400.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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