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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0578400 |
| Transcript ID | LotjaGi1g1v0578400.8 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|A0A151THL8|A0A151THL8_CAJCA Delta-1-pyrroline-5-carboxylate synthetase; Found in the gene: LotjaGi1g1v0578400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:111805691..111811887) extracted from Lotus japonicus Gifu genome v1.2.
TGTGACTTAGCGTACCCAACAACTTAAGCTTTTGGAGTCGTTTATTTGAATCATCCATTTGGTTTTCTTTTCTAATTGCC TTGAATTTCATTTCCCCCATTTACGTCGATTCTTTATTTCCATAATTCTGTACTTCTAGATTGTTTACTTTCTGTGTGTT AGCATCTCATCGGTAATACGATTGGTGTTTTTTTGTTTTGATATAGTTCTACAATTAAACATTTATTTATTTTGCAATAC TTGAAGGTTGGAACAGCTGTGGTTACTCGAAGTGATGGAAGATTAGCATTGGGAAGAATAGGAGCTCTCTGTGAGCAGGT AAAGGCATAAATCTTTTAGCACAAATCTAAACTTATATCTTAATGGCAATTAAAAATCACGGTAGAGCAAAATCCAGTAA GATGCCACATTTTATTCCATATATTTTTTAATTTAAACATGAAGGGATTCATAAATTAAGGGTAATTAAGATTTATAGCT GGAGTATTTGCAACTAAATCATTGTTCTGCTTTGCTCTAGTCTTGTTGAAGATGAATGGTAGGTAGTTGTACATTACAAA AATTACATGTGTTCGATATTCCTCACTGGTCATGTAATTTTTGTTGCATCTGAAAGTGATCATCCTTACTGCAGCTTAAA GAACTAAATATGAAGGGGTATGAGGTTATATTGGTGACTTCAGGTGCAGTTGGTCTTGGCCGCCAAAGACTAAGATATCG CAGATTAGCCAATAGCAGGTTTTTGTTCTTTCTCTTTTGCTATAGTTGCTGGACATTTTTAAAAGGCATGAATCCAAGTT TCAAATAATAACTTGTTCTTGATTTCATTACATCTGTTCGTAAAAATTGCTATTAGTTCTGATGGTAGTGATGTTCCGAA AAATAGTATTTTTTTTTCGTAAGCAATAGAAATGTAAAGAAAAACAAAAGTAAATGATTTGATCTTTTCATCAGATCAGC AGAACAAAAACTAGTTATTGTGCAAACTTTTTGCAAATCAAGAAGTAATTCAAGTTTTTCATTGTTCACTCCAAGCTTGC TTCCTTTTTCTGATTTGTTTAACTATGAATAAACCAGCATAGCATTGAAATTTGAAAGATCTTGTGCGAATTTTTCATGG TTCTGTTGACATGAGGTAGAGTTTGAGCGATAGAGGATGAAAATAATGAGCTTGAAATAAAGTGTCTACTTGTTATGCAG CTTTTCTGATCTTCAGAAGCCGCAAGGAGAACTTGATGGCAAAGCATGTGCAGCTGTTGGGCAGAGTAGTCTCATGGCCC TATATGATATCATGTTTAGCCAGGTGCTAACAAAATTAAGTTTTTGATTAAATATGTCCCGAATCTTATATATGTATCTG TTGCAATAATCCATTAACATGTGTTTATTAATCTGCTTGTATCTCCTATCTATATTGATGTTAATATGTAACTTTCCTGG TGCAGCTTGATGTGACTTCATCCCAACTTCTAGTGAATGATGGGTTTTTTAGGGATACAGGTTTCAGAAAACAACTATCA GATACTGTGAACTCATTATTAGATTTAAGGGTTATCCCCGTTTTCAATGAAAATGATGCTGTTAGTACTAGGAAGGCACC ATATGAGGTATGAACCTTATTTTTTGTTTTTGAGAAAACTTTTTCTGCTTAAAATGTATTAGTTTTACTTTAGTGGTTTT GTGACATAATAATCTTCTCTTGCGAGCACTGTCTGCAGGATTCTTCTGGAATATTCTGGGATAATGACAGCTTGGCTGGT CTATTGGCTCTGGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGTGGCCCTCCAACTGA TCCAAAGTCAAAGTTAATTCACACATATGTAAAAGAAAAACATCAAACAGAAATTACTTTTGGAGACAAGTCAAGATTGG GAAGAGGTGGTATGACTGCCAAAGTTAATGCTGCTGTTTGCTCTGCCTATGCTGGCACACCTGTGATTATTACTAGGTAT CTTCGGTTTTATTTCACTAAGCTATTACTGATACCGTGAGTAAAGTATTGACCTAAAAATAAATATTCTTGAATTCTATT TCAACCTCCTTTGCAGTGGCTATGCAACAAATAACATCATGAGAGTGCTTCAAGGAGAAAAAATTGGTACTGTCTTTCAT AAAGATGCTCATATGTGGACCAGCATAAAGGAAGTGAGTGCACATGAAATGGCAGTTTCCGCACGTGATAGTTCTAGAAG ACTTCAGGTAATTAAGGTTACATATTTGGAATGTTAAGTGCAAGGTTTACTGTCGTAAATTTCTTCAAGTTGGAATTTAA CTTTAATTTCGTTTTTGGTTGTTGCCAACGTAATGAGCTCAGATAAGTTGTTTCATTTGTATATTGGTGCTTTTGGCTGC AGATTCTAAATTCTGAAGAGAGGAGGCAAATATTGCTAGATATGGCTGATGCATTAGAGAATAATGATAGTATGATAAGG CTTGAGAATGGAGCTGATGTTGCTGATGCAGAAGAGGCTGGATATGAGAAATCATTGATATCACGTTTAACCCTGAGACC CGAAAAGGCAAGAACTTTATTAGTTACCATCTGACATGAATTACTGAAAGATGATTTGCTCAGCATTCTGATTTGCTCAC TTTCCACAGCAGGCTTCCTAAAATTTTCTCATTTAGTGAGCATGTTTTTATCTAACCTTTGTTTTTGGATTTTCAGATGT CTAGTCTTGTAAAGTCTGTTCGCATGCTGGCAGACATGGAAGAACCCATTGGTCAGATGATAAAGAGAACTGAGGTCAAA ACCCCCTAAATAATCATGTCATTGACCAGTTATTAAATAACACGTGAAATTGGTTCTGTGATATTGTAAAATATTCGACA GTTTTCATTTTTGACATATTTGAACAATGTAACATGTTTCCAACAATGATTTATGCAATTATGCTATAGGAATTTCAGGA AAGTGATAATGTTATGAAAACTTGCATTCCATCGTTCAACATTCATTTTGATAGTTCTGATTACTTCTCTGTTTCCAGCT AGCAGATGAACTCATCCTGGAGAAAATATCATGTCCTTTGGGTGTATTTCTGGTTATATTTGAGTCTCGGCCTGATGCTC TTGTTCAGGTTAAGATAATTCCTTCTCAATTCTTACCAACATCAGCATTAATTAAAAATCAGAGCTCCAATATTTTAATT TTTGACTTATGATTCTGAAATTTATACAAATTTGTTAAGTTTATTGAATATTAATCTTTAAGATTACTGTTTGAATTTGT TAATAGATAGCTGCATTGGCAATAAGAAGTGGAAATGGTTTACTGCTTAAAGGAGGAAAGGAAGCCAAACGGTCAAATGC AGTCCTACACAAGGTTTATTTTACTTGATGAATGCAAATCAGAACTCTGTTGTTTCTTTGCCATATTTTTAAGTTTACTA TTAATTTTTCCTCTTTAACTTCTTCATTATTGTAGGTCATTACATCAGTTATTCCTGATAAAGTTGGTAACAAACTTATC GGGCTTGTAACTTCAAGAGAAGAAATTCCAGATCTGCTCAAGGTGGATGATACTACAAGTAAAATTCCTAACCTCTATTT GTCTGAGATTATTTTCAACTAATTAAACTCTGTCACAGCTTGATGACGTGATAGATCTTGTGGTCCCTAGAGGCAGTAGT AAACTTGTTTCTCAAATCAAGGCTTCAACAAGGATTCCTGTTCTTGGTCATGCTGGTAATAAAAGCATTTAAGTTTCCTA TTTTTATGAATTAAAAGCATTTAAGTTAAAATTATAAAAAAAACGATTCTATTAAATTTTTATGTTTGTCATGCAGATGG AATATGCCATGTATATGTTGATAAAACAGCTAATATGGATATGGCAAAGAAGATTGTTAGGGATGCAAAGGTTGATTATC CTGCAGCATGCAATGCAATGGTAATTACAATTCACATTCTCTGCAATGCTCCGACCAGGGCATCATCATCTACATCCACA TCTCCTTTTGAGTTTTCTTCATTTTCTGTTCAAGATGTGAATTAAATCTATGAACTTTGCTCATTACGATATTCTGTCCT GATTTTCTTAGGAAACCCTTCTTGTACACAAAGATCTATCAGAAAATGGTGGACTTGAAGAACTTGTTGCTGAACTCCAA CGTGAAGGTTTGACCTTAGTTGCAAAATAACTTACAATGAATGAAACATGCATTAATTGGAACTTCTTATTCTTTTTCAA TACTTATTAGCTTCATCTTTAGCACCATTTAAATAAGTAGTTTTGACATATTAGTTTTACTGATGTCCATTTGCTTTCTT CTAACTCAATTTTGATTCCAATCCAAATGTTGAAGAATTTATAGGAGAGATAAATTGTTTGACTAAATGTCTACATATAT CTTGAAAACCAAAATTACATTTTGAAAATAAGGGCAATATAAGTAAATTTGTTTTAAAATCTCACCCCACCTAAACCAAA TAAGAAGTGGTTTATTTCCCCTCCCTTCGGCCTCCCTCCGCTCCCTTTGATCAAATACGATTGCTAGGACATGAATAACT GGAAAAACGTGGACAAATGGAAATAACGCAAGCTAACAAATTGGGAAATGAGGAAATCAGTACCTTGATTCTGAGCTCAA ATGTCAAATTATCTATTTTCAGGTGTTCAACTATATGGTGGATCAAAAGCTAGTGCCTTGTTAAATATCACTGAAGCAGA CACTTTTCATCATGAGTATAGTTCACTGGCTTGTACAGTTGAAATTGTAGATGATGTATCTGCTGCCATTAACCACATAC ATGAACATGGAAGGCAAGTTTTGGTTCACTTTCAAAAACTATGTTTTGAATTTTGATGCTATATATCATGAACATTGTTC TCTTAAAAGTCTCTGTCTTTCTTTCCTTTTTCTGCAGTTCTCATACTGAATGCATTGTTACAGAAGACTGTGAAGTTGCT AAAACTTTCTTAAGTCAAGTTGACAGGTAAGTGTAGACTTTTCACAGCAGCGTTGTTTGATCCTTTGCCCAGTTCCTAGT TCTAAAAGATACTAAACTAGCATGATGATATGTCAGTTTACTTCAAATGCCTGCTGTGATTTGTCTGAACCACAAACCTG TACATTCATTAATATTGGATTAATATTTTCCCCAACATCTAAGTCTTCATGTTCGGCGCTTTTCATGAGTTCCATCAAGA TTGTAATGCAAGAATAAAACAATAAATCAGAAGATATTACATGCATTGGGGGAATTGAACTTAAGATCGTCACATATGTT GAACTTGATTACCATCAACAGAACAAACTTTGTAGGGTGAATTACAATATTGATAGATCAGTGCATATCAAGGTGGATAA GGTCAAGGCTTGATCGGTAGGAAGATTATTACTTCTTACTTAATCCTCTAAACTAATCATAGAACTTCTGAGGATCATAA TGTATTTTTCTATCCTTTATCTCCACCTCTGCGTTTCTACCTTCACATCTAGTCCTGAATGAATTGCTTCTTCAAAGTCT TCGACTTTACCTCTTACGCGCATTGACGACCCGTACTATATTTCATTTGGACATAATTACTTTAACATTTAAATAGAATT CATGCTTCTATGTCTTTCAAGTTTTCTACATTTTTTTTTGTTTTTAACTTGATTTTGCTGACTGTTGAATATGGATTTTT GCCTGATGCACAAATAGTGCTGCTGTATTCCACAATGCAAGTACAAGGTTTTGTGATGGAGCACGCTTTGGGCTTGGTGC AGAGGTAGTGCACTTTCCAAAAGCACATTGTGCTAATAGCAGCACTGTAATTCATGTTTTTTCAACTTTCTTTGATATTC ATTGTTGTTCAGGTTGGAATAAGCACAAGCAGAATTCATGCCCGTGGCCCTGTAGGAGTTGAGGGGTTATTATCAAATAG ATGGTACGAAATTATGCAATGTCTTAGTTTGTATTATTAAAAGAAAAAACACCAAGTGAACAAACTTTTACAACTATTAA TAAAATTGCTAGAGTTGTGCTTGAACATTATTTAATACGTGAATGCTATTTTACCATCAAGATTATGACTTCATACATTT TCTGTTAGACTAAATCTTACCTTGAAATAATGCAGGATATTGAGAGGGACGGGACAAGTGGTAGATGGCGATCGAGGGGT CACTTATACTTACAAGGAACTGCCAATAAAAGCATAA
CDS sequence (LotjaGi1g1v0578400.8) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGGTATGAGGTTATATTGGTGACTTCAGGTGCAGTTGGTCTTGGCCGCCAAAGACTAAGATATCGCAGATTAGC CAATAGCAGCTTTTCTGATCTTCAGAAGCCGCAAGGAGAACTTGATGGCAAAGCATGTGCAGCTGTTGGGCAGAGTAGTC TCATGGCCCTATATGATATCATGTTTAGCCAGCTTGATGTGACTTCATCCCAACTTCTAGTGAATGATGGGTTTTTTAGG GATACAGGTTTCAGAAAACAACTATCAGATACTGTGAACTCATTATTAGATTTAAGGGTTATCCCCGTTTTCAATGAAAA TGATGCTGTTAGTACTAGGAAGGCACCATATGAGGATTCTTCTGGAATATTCTGGGATAATGACAGCTTGGCTGGTCTAT TGGCTCTGGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGTGGCCCTCCAACTGATCCA AAGTCAAAGTTAATTCACACATATGTAAAAGAAAAACATCAAACAGAAATTACTTTTGGAGACAAGTCAAGATTGGGAAG AGGTGGTATGACTGCCAAAGTTAATGCTGCTGTTTGCTCTGCCTATGCTGGCACACCTGTGATTATTACTAGTGGCTATG CAACAAATAACATCATGAGAGTGCTTCAAGGAGAAAAAATTGGTACTGTCTTTCATAAAGATGCTCATATGTGGACCAGC ATAAAGGAAGTGAGTGCACATGAAATGGCAGTTTCCGCACGTGATAGTTCTAGAAGACTTCAGATTCTAAATTCTGAAGA GAGGAGGCAAATATTGCTAGATATGGCTGATGCATTAGAGAATAATGATAGTATGATAAGGCTTGAGAATGGAGCTGATG TTGCTGATGCAGAAGAGGCTGGATATGAGAAATCATTGATATCACGTTTAACCCTGAGACCCGAAAAGATGTCTAGTCTT GTAAAGTCTGTTCGCATGCTGGCAGACATGGAAGAACCCATTGGTCAGATGATAAAGAGAACTGAGCTAGCAGATGAACT CATCCTGGAGAAAATATCATGTCCTTTGGGTGTATTTCTGGTTATATTTGAGTCTCGGCCTGATGCTCTTGTTCAGATAG CTGCATTGGCAATAAGAAGTGGAAATGGTTTACTGCTTAAAGGAGGAAAGGAAGCCAAACGGTCAAATGCAGTCCTACAC AAGGTCATTACATCAGTTATTCCTGATAAAGTTGGTAACAAACTTATCGGGCTTGTAACTTCAAGAGAAGAAATTCCAGA TCTGCTCAAGCTTGATGACGTGATAGATCTTGTGGTCCCTAGAGGCAGTAGTAAACTTGTTTCTCAAATCAAGGCTTCAA CAAGGATTCCTGTTCTTGGTCATGCTGATGGAATATGCCATGTATATGTTGATAAAACAGCTAATATGGATATGGCAAAG AAGATTGTTAGGGATGCAAAGGTTGATTATCCTGCAGCATGCAATGCAATGGAAACCCTTCTTGTACACAAAGATCTATC AGAAAATGGTGGACTTGAAGAACTTGTTGCTGAACTCCAACGTGAAGGTGTTCAACTATATGGTGGATCAAAAGCTAGTG CCTTGTTAAATATCACTGAAGCAGACACTTTTCATCATGAGTATAGTTCACTGGCTTGTACAGTTGAAATTGTAGATGAT GTATCTGCTGCCATTAACCACATACATGAACATGGAAGTTCTCATACTGAATGCATTGTTACAGAAGACTGTGAAGTTGC TAAAACTTTCTTAAGTCAAGTTGACAGTGCTGCTGTATTCCACAATGCAAGTACAAGGTTTTGTGATGGAGCACGCTTTG GGCTTGGTGCAGAGGTTGGAATAAGCACAAGCAGAATTCATGCCCGTGGCCCTGTAGGAGTTGAGGGGTTATTATCAAAT AGATGGATATTGAGAGGGACGGGACAAGTGGTAGATGGCGATCGAGGGGTCACTTATACTTACAAGGAACTGCCAATAAA AGCATAA
Protein sequence (LotjaGi1g1v0578400.8) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGYEVILVTSGAVGLGRQRLRYRRLANSSFSDLQKPQGELDGKACAAVGQSSLMALYDIMFSQLDVTSSQLLVNDGFFR DTGFRKQLSDTVNSLLDLRVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPTDP KSKLIHTYVKEKHQTEITFGDKSRLGRGGMTAKVNAAVCSAYAGTPVIITSGYATNNIMRVLQGEKIGTVFHKDAHMWTS IKEVSAHEMAVSARDSSRRLQILNSEERRQILLDMADALENNDSMIRLENGADVADAEEAGYEKSLISRLTLRPEKMSSL VKSVRMLADMEEPIGQMIKRTELADELILEKISCPLGVFLVIFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAVLH KVITSVIPDKVGNKLIGLVTSREEIPDLLKLDDVIDLVVPRGSSKLVSQIKASTRIPVLGHADGICHVYVDKTANMDMAK KIVRDAKVDYPAACNAMETLLVHKDLSENGGLEELVAELQREGVQLYGGSKASALLNITEADTFHHEYSSLACTVEIVDD VSAAINHIHEHGSSHTECIVTEDCEVAKTFLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLSN RWILRGTGQVVDGDRGVTYTYKELPIKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 239 | 239 | 5.8E-67 | ||
| PIRSF | 1 | 668 | 668 | 0.0 | ||
| Pfam | 1 | 211 | 211 | 2.9E-25 | ||
| PANTHER | 2 | 668 | 667 | 0.0 | – | |
| TIGRFAM | 2 | 667 | 666 | 0.0 | ||
| SUPERFAMILY | 2 | 233 | 232 | 1.31E-42 | ||
| PANTHER | 2 | 668 | 667 | 0.0 | – | |
| PRINTS | 3 | 17 | 15 | 9.9E-56 | ||
| PRINTS | 47 | 75 | 29 | 9.9E-56 | ||
| PRINTS | 87 | 108 | 22 | 9.9E-56 | ||
| PRINTS | 126 | 153 | 28 | 9.9E-56 | ||
| PRINTS | 185 | 205 | 21 | 9.9E-56 | ||
| Pfam | 243 | 520 | 278 | 2.6E-7 | ||
| Hamap | 245 | 651 | 407 | 33.908 | ||
| SUPERFAMILY | 247 | 650 | 404 | 7.15E-93 | ||
| CDD | 248 | 647 | 400 | 0.0 | ||
| Gene3D | 253 | 648 | 396 | 3.8E-153 | ||
| TIGRFAM | 253 | 640 | 388 | 7.2E-136 | ||
| Coils | 262 | 282 | 21 | - | – | |
| Gene3D | 463 | 609 | 147 | 3.8E-153 | ||
| ProSitePatterns | 558 | 579 | 22 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Glutamate-5-semialdehyde dehydrogenase activity | Catalysis of the reaction: L-glutamate 5-semialdehyde + NADP(+) + phosphate = L-glutamyl 5-phosphate + H(+) + NADPH. | ||
| Biological process | Proline biosynthetic process | The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0578400.8, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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