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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0578400 |
| Transcript ID | LotjaGi1g1v0578400.9 |
| Related isoforms 10 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Gamma-glutamyl phosphate reductase; TAIR: AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2; Swiss-Prot: sp|O04226|P5CS_ORYSJ Delta-1-pyrroline-5-carboxylate synthase; TrEMBL-Plants: tr|K7L1J3|K7L1J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0578400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:111805691..111811943) extracted from Lotus japonicus Gifu genome v1.2.
ACCCAAATGGTTAAGCTTTTGCGATAATTGGTTGTTTGACATAGTATAAGATGCTATGTGACTTAGCGTACCCAACAACT TAAGCTTTTGGAGTCGTTTATTTGAATCATCCATTTGGTTTTCTTTTCTAATTGCCTTGAATTTCATTTCCCCCATTTAC GTCGATTCTTTATTTCCATAATTCTGTACTTCTAGATTGTTTACTTTCTGTGTGTTAGCATCTCATCGGTAATACGATTG GTGTTTTTTTGTTTTGATATAGTTCTACAATTAAACATTTATTTATTTTGCAATACTTGAAGGTTGGAACAGCTGTGGTT ACTCGAAGTGATGGAAGATTAGCATTGGGAAGAATAGGAGCTCTCTGTGAGCAGGTAAAGGCATAAATCTTTTAGCACAA ATCTAAACTTATATCTTAATGGCAATTAAAAATCACGGTAGAGCAAAATCCAGTAAGATGCCACATTTTATTCCATATAT TTTTTAATTTAAACATGAAGGGATTCATAAATTAAGGGTAATTAAGATTTATAGCTGGAGTATTTGCAACTAAATCATTG TTCTGCTTTGCTCTAGTCTTGTTGAAGATGAATGGTAGGTAGTTGTACATTACAAAAATTACATGTGTTCGATATTCCTC ACTGGTCATGTAATTTTTGTTGCATCTGAAAGTGATCATCCTTACTGCAGCTTAAAGAACTAAATATGAAGGGGTATGAG GTTATATTGGTGACTTCAGGTGCAGTTGGTCTTGGCCGCCAAAGACTAAGATATCGCAGATTAGCCAATAGCAGGTTTTT GTTCTTTCTCTTTTGCTATAGTTGCTGGACATTTTTAAAAGGCATGAATCCAAGTTTCAAATAATAACTTGTTCTTGATT TCATTACATCTGTTCGTAAAAATTGCTATTAGTTCTGATGGTAGTGATGTTCCGAAAAATAGTATTTTTTTTTCGTAAGC AATAGAAATGTAAAGAAAAACAAAAGTAAATGATTTGATCTTTTCATCAGATCAGCAGAACAAAAACTAGTTATTGTGCA AACTTTTTGCAAATCAAGAAGTAATTCAAGTTTTTCATTGTTCACTCCAAGCTTGCTTCCTTTTTCTGATTTGTTTAACT ATGAATAAACCAGCATAGCATTGAAATTTGAAAGATCTTGTGCGAATTTTTCATGGTTCTGTTGACATGAGGTAGAGTTT GAGCGATAGAGGATGAAAATAATGAGCTTGAAATAAAGTGTCTACTTGTTATGCAGCTTTTCTGATCTTCAGAAGCCGCA AGGAGAACTTGATGGCAAAGCATGTGCAGCTGTTGGGCAGAGTAGTCTCATGGCCCTATATGATATCATGTTTAGCCAGG TGCTAACAAAATTAAGTTTTTGATTAAATATGTCCCGAATCTTATATATGTATCTGTTGCAATAATCCATTAACATGTGT TTATTAATCTGCTTGTATCTCCTATCTATATTGATGTTAATATGTAACTTTCCTGGTGCAGCTTGATGTGACTTCATCCC AACTTCTAGTGAATGATGGGTTTTTTAGGGATACAGGTTTCAGAAAACAACTATCAGATACTGTGAACTCATTATTAGAT TTAAGGGTTATCCCCGTTTTCAATGAAAATGATGCTGTTAGTACTAGGAAGGCACCATATGAGGTATGAACCTTATTTTT TGTTTTTGAGAAAACTTTTTCTGCTTAAAATGTATTAGTTTTACTTTAGTGGTTTTGTGACATAATAATCTTCTCTTGCG AGCACTGTCTGCAGGATTCTTCTGGAATATTCTGGGATAATGACAGCTTGGCTGGTCTATTGGCTCTGGAACTTAAAGCT GACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGTGGCCCTCCAACTGATCCAAAGTCAAAGTTAATTCACAC ATATGTAAAAGAAAAACATCAAACAGAAATTACTTTTGGAGACAAGTCAAGATTGGGAAGAGGTGGTATGACTGCCAAAG TTAATGCTGCTGTTTGCTCTGCCTATGCTGGCACACCTGTGATTATTACTAGGTATCTTCGGTTTTATTTCACTAAGCTA TTACTGATACCGTGAGTAAAGTATTGACCTAAAAATAAATATTCTTGAATTCTATTTCAACCTCCTTTGCAGTGGCTATG CAACAAATAACATCATGAGAGTGCTTCAAGGAGAAAAAATTGGTACTGTCTTTCATAAAGATGCTCATATGTGGACCAGC ATAAAGGAAGTGAGTGCACATGAAATGGCAGTTTCCGCACGTGATAGTTCTAGAAGACTTCAGGTAATTAAGGTTACATA TTTGGAATGTTAAGTGCAAGGTTTACTGTCGTAAATTTCTTCAAGTTGGAATTTAACTTTAATTTCGTTTTTGGTTGTTG CCAACGTAATGAGCTCAGATAAGTTGTTTCATTTGTATATTGGTGCTTTTGGCTGCAGATTCTAAATTCTGAAGAGAGGA GGCAAATATTGCTAGATATGGCTGATGCATTAGAGAATAATGATAGTATGATAAGGCTTGAGAATGGAGCTGATGTTGCT GATGCAGAAGAGGCTGGATATGAGAAATCATTGATATCACGTTTAACCCTGAGACCCGAAAAGGCAAGAACTTTATTAGT TACCATCTGACATGAATTACTGAAAGATGATTTGCTCAGCATTCTGATTTGCTCACTTTCCACAGCAGGCTTCCTAAAAT TTTCTCATTTAGTGAGCATGTTTTTATCTAACCTTTGTTTTTGGATTTTCAGATGTCTAGTCTTGTAAAGTCTGTTCGCA TGCTGGCAGACATGGAAGAACCCATTGGTCAGATGATAAAGAGAACTGAGGTCAAAACCCCCTAAATAATCATGTCATTG ACCAGTTATTAAATAACACGTGAAATTGGTTCTGTGATATTGTAAAATATTCGACAGTTTTCATTTTTGACATATTTGAA CAATGTAACATGTTTCCAACAATGATTTATGCAATTATGCTATAGGAATTTCAGGAAAGTGATAATGTTATGAAAACTTG CATTCCATCGTTCAACATTCATTTTGATAGTTCTGATTACTTCTCTGTTTCCAGCTAGCAGATGAACTCATCCTGGAGAA AATATCATGTCCTTTGGGTGTATTTCTGGTTATATTTGAGTCTCGGCCTGATGCTCTTGTTCAGGTTAAGATAATTCCTT CTCAATTCTTACCAACATCAGCATTAATTAAAAATCAGAGCTCCAATATTTTAATTTTTGACTTATGATTCTGAAATTTA TACAAATTTGTTAAGTTTATTGAATATTAATCTTTAAGATTACTGTTTGAATTTGTTAATAGATAGCTGCATTGGCAATA AGAAGTGGAAATGGTTTACTGCTTAAAGGAGGAAAGGAAGCCAAACGGTCAAATGCAGTCCTACACAAGGTTTATTTTAC TTGATGAATGCAAATCAGAACTCTGTTGTTTCTTTGCCATATTTTTAAGTTTACTATTAATTTTTCCTCTTTAACTTCTT CATTATTGTAGGTCATTACATCAGTTATTCCTGATAAAGTTGGTAACAAACTTATCGGGCTTGTAACTTCAAGAGAAGAA ATTCCAGATCTGCTCAAGGTGGATGATACTACAAGTAAAATTCCTAACCTCTATTTGTCTGAGATTATTTTCAACTAATT AAACTCTGTCACAGCTTGATGACGTGATAGATCTTGTGGTCCCTAGAGGCAGTAGTAAACTTGTTTCTCAAATCAAGGCT TCAACAAGGATTCCTGTTCTTGGTCATGCTGGTAATAAAAGCATTTAAGTTTCCTATTTTTATGAATTAAAAGCATTTAA GTTAAAATTATAAAAAAAACGATTCTATTAAATTTTTATGTTTGTCATGCAGATGGAATATGCCATGTATATGTTGATAA AACAGCTAATATGGATATGGCAAAGAAGATTGTTAGGGATGCAAAGGTTGATTATCCTGCAGCATGCAATGCAATGGTAA TTACAATTCACATTCTCTGCAATGCTCCGACCAGGGCATCATCATCTACATCCACATCTCCTTTTGAGTTTTCTTCATTT TCTGTTCAAGATGTGAATTAAATCTATGAACTTTGCTCATTACGATATTCTGTCCTGATTTTCTTAGGAAACCCTTCTTG TACACAAAGATCTATCAGAAAATGGTGGACTTGAAGAACTTGTTGCTGAACTCCAACGTGAAGGTTTGACCTTAGTTGCA AAATAACTTACAATGAATGAAACATGCATTAATTGGAACTTCTTATTCTTTTTCAATACTTATTAGCTTCATCTTTAGCA CCATTTAAATAAGTAGTTTTGACATATTAGTTTTACTGATGTCCATTTGCTTTCTTCTAACTCAATTTTGATTCCAATCC AAATGTTGAAGAATTTATAGGAGAGATAAATTGTTTGACTAAATGTCTACATATATCTTGAAAACCAAAATTACATTTTG AAAATAAGGGCAATATAAGTAAATTTGTTTTAAAATCTCACCCCACCTAAACCAAATAAGAAGTGGTTTATTTCCCCTCC CTTCGGCCTCCCTCCGCTCCCTTTGATCAAATACGATTGCTAGGACATGAATAACTGGAAAAACGTGGACAAATGGAAAT AACGCAAGCTAACAAATTGGGAAATGAGGAAATCAGTACCTTGATTCTGAGCTCAAATGTCAAATTATCTATTTTCAGGT GTTCAACTATATGGTGGATCAAAAGCTAGTGCCTTGTTAAATATCACTGAAGCAGACACTTTTCATCATGAGTATAGTTC ACTGGCTTGTACAGTTGAAATTGTAGATGATGTATCTGCTGCCATTAACCACATACATGAACATGGAAGGCAAGTTTTGG TTCACTTTCAAAAACTATGTTTTGAATTTTGATGCTATATATCATGAACATTGTTCTCTTAAAAGTCTCTGTCTTTCTTT CCTTTTTCTGCAGTTCTCATACTGAATGCATTGTTACAGAAGACTGTGAAGTTGCTAAAACTTTCTTAAGTCAAGTTGAC AGGTAAGTGTAGACTTTTCACAGCAGCGTTGTTTGATCCTTTGCCCAGTTCCTAGTTCTAAAAGATACTAAACTAGCATG ATGATATGTCAGTTTACTTCAAATGCCTGCTGTGATTTGTCTGAACCACAAACCTGTACATTCATTAATATTGGATTAAT ATTTTCCCCAACATCTAAGTCTTCATGTTCGGCGCTTTTCATGAGTTCCATCAAGATTGTAATGCAAGAATAAAACAATA AATCAGAAGATATTACATGCATTGGGGGAATTGAACTTAAGATCGTCACATATGTTGAACTTGATTACCATCAACAGAAC AAACTTTGTAGGGTGAATTACAATATTGATAGATCAGTGCATATCAAGGTGGATAAGGTCAAGGCTTGATCGGTAGGAAG ATTATTACTTCTTACTTAATCCTCTAAACTAATCATAGAACTTCTGAGGATCATAATGTATTTTTCTATCCTTTATCTCC ACCTCTGCGTTTCTACCTTCACATCTAGTCCTGAATGAATTGCTTCTTCAAAGTCTTCGACTTTACCTCTTACGCGCATT GACGACCCGTACTATATTTCATTTGGACATAATTACTTTAACATTTAAATAGAATTCATGCTTCTATGTCTTTCAAGTTT TCTACATTTTTTTTTGTTTTTAACTTGATTTTGCTGACTGTTGAATATGGATTTTTGCCTGATGCACAAATAGTGCTGCT GTATTCCACAATGCAAGTACAAGGTTTTGTGATGGAGCACGCTTTGGGCTTGGTGCAGAGGTAGTGCACTTTCCAAAAGC ACATTGTGCTAATAGCAGCACTGTAATTCATGTTTTTTCAACTTTCTTTGATATTCATTGTTGTTCAGGTTGGAATAAGC ACAAGCAGAATTCATGCCCGTGGCCCTGTAGGAGTTGAGGGGTTATTATCAAATAGATGGTACGAAATTATGCAATGTCT TAGTTTGTATTATTAAAAGAAAAAACACCAAGTGAACAAACTTTTACAACTATTAATAAAATTGCTAGAGTTGTGCTTGA ACATTATTTAATACGTGAATGCTATTTTACCATCAAGATTATGACTTCATACATTTTCTGTTAGACTAAATCTTACCTTG AAATAATGCAGGATATTGAGAGGGACGGGACAAGTGGTAGATGGCGATCGAGGGGTCACTTATACTTACAAGGAACTGCC AATAAAAGCATAA
CDS sequence (LotjaGi1g1v0578400.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTAAGCTTTTTTCTACAATTAAACATTTATTTATTTTGCAATACTTGAAGGTTGGAACAGCTGTGGTTACTCGAAG TGATGGAAGATTAGCATTGGGAAGAATAGGAGCTCTCTGTGAGCAGCTTAAAGAACTAAATATGAAGGGGTATGAGGTTA TATTGGTGACTTCAGGTGCAGTTGGTCTTGGCCGCCAAAGACTAAGATATCGCAGATTAGCCAATAGCAGCTTTTCTGAT CTTCAGAAGCCGCAAGGAGAACTTGATGGCAAAGCATGTGCAGCTGTTGGGCAGAGTAGTCTCATGGCCCTATATGATAT CATGTTTAGCCAGCTTGATGTGACTTCATCCCAACTTCTAGTGAATGATGGGTTTTTTAGGGATACAGGTTTCAGAAAAC AACTATCAGATACTGTGAACTCATTATTAGATTTAAGGGTTATCCCCGTTTTCAATGAAAATGATGCTGTTAGTACTAGG AAGGCACCATATGAGCACTGTCTGCAGGATTCTTCTGGAATATTCTGGGATAATGACAGCTTGGCTGGTCTATTGGCTCT GGAACTTAAAGCTGACCTCCTTGTTTTATTGAGTGATGTTGAGGGCCTTTACAGTGGCCCTCCAACTGATCCAAAGTCAA AGTTAATTCACACATATGTAAAAGAAAAACATCAAACAGAAATTACTTTTGGAGACAAGTCAAGATTGGGAAGAGGTGGT ATGACTGCCAAAGTTAATGCTGCTGTTTGCTCTGCCTATGCTGGCACACCTGTGATTATTACTAGTGGCTATGCAACAAA TAACATCATGAGAGTGCTTCAAGGAGAAAAAATTGGTACTGTCTTTCATAAAGATGCTCATATGTGGACCAGCATAAAGG AAGTGAGTGCACATGAAATGGCAGTTTCCGCACGTGATAGTTCTAGAAGACTTCAGATTCTAAATTCTGAAGAGAGGAGG CAAATATTGCTAGATATGGCTGATGCATTAGAGAATAATGATAGTATGATAAGGCTTGAGAATGGAGCTGATGTTGCTGA TGCAGAAGAGGCTGGATATGAGAAATCATTGATATCACGTTTAACCCTGAGACCCGAAAAGATGTCTAGTCTTGTAAAGT CTGTTCGCATGCTGGCAGACATGGAAGAACCCATTGGTCAGATGATAAAGAGAACTGAGCTAGCAGATGAACTCATCCTG GAGAAAATATCATGTCCTTTGGGTGTATTTCTGGTTATATTTGAGTCTCGGCCTGATGCTCTTGTTCAGATAGCTGCATT GGCAATAAGAAGTGGAAATGGTTTACTGCTTAAAGGAGGAAAGGAAGCCAAACGGTCAAATGCAGTCCTACACAAGGTCA TTACATCAGTTATTCCTGATAAAGTTGGTAACAAACTTATCGGGCTTGTAACTTCAAGAGAAGAAATTCCAGATCTGCTC AAGCTTGATGACGTGATAGATCTTGTGGTCCCTAGAGGCAGTAGTAAACTTGTTTCTCAAATCAAGGCTTCAACAAGGAT TCCTGTTCTTGGTCATGCTGATGGAATATGCCATGTATATGTTGATAAAACAGCTAATATGGATATGGCAAAGAAGATTG TTAGGGATGCAAAGGTTGATTATCCTGCAGCATGCAATGCAATGGAAACCCTTCTTGTACACAAAGATCTATCAGAAAAT GGTGGACTTGAAGAACTTGTTGCTGAACTCCAACGTGAAGGTGTTCAACTATATGGTGGATCAAAAGCTAGTGCCTTGTT AAATATCACTGAAGCAGACACTTTTCATCATGAGTATAGTTCACTGGCTTGTACAGTTGAAATTGTAGATGATGTATCTG CTGCCATTAACCACATACATGAACATGGAAGTTCTCATACTGAATGCATTGTTACAGAAGACTGTGAAGTTGCTAAAACT TTCTTAAGTCAAGTTGACAGTGCTGCTGTATTCCACAATGCAAGTACAAGGTTTTGTGATGGAGCACGCTTTGGGCTTGG TGCAGAGGTTGGAATAAGCACAAGCAGAATTCATGCCCGTGGCCCTGTAGGAGTTGAGGGGTTATTATCAAATAGATGGA TATTGAGAGGGACGGGACAAGTGGTAGATGGCGATCGAGGGGTCACTTATACTTACAAGGAACTGCCAATAAAAGCATAA
Protein sequence (LotjaGi1g1v0578400.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVKLFSTIKHLFILQYLKVGTAVVTRSDGRLALGRIGALCEQLKELNMKGYEVILVTSGAVGLGRQRLRYRRLANSSFSD LQKPQGELDGKACAAVGQSSLMALYDIMFSQLDVTSSQLLVNDGFFRDTGFRKQLSDTVNSLLDLRVIPVFNENDAVSTR KAPYEHCLQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPTDPKSKLIHTYVKEKHQTEITFGDKSRLGRGG MTAKVNAAVCSAYAGTPVIITSGYATNNIMRVLQGEKIGTVFHKDAHMWTSIKEVSAHEMAVSARDSSRRLQILNSEERR QILLDMADALENNDSMIRLENGADVADAEEAGYEKSLISRLTLRPEKMSSLVKSVRMLADMEEPIGQMIKRTELADELIL EKISCPLGVFLVIFESRPDALVQIAALAIRSGNGLLLKGGKEAKRSNAVLHKVITSVIPDKVGNKLIGLVTSREEIPDLL KLDDVIDLVVPRGSSKLVSQIKASTRIPVLGHADGICHVYVDKTANMDMAKKIVRDAKVDYPAACNAMETLLVHKDLSEN GGLEELVAELQREGVQLYGGSKASALLNITEADTFHHEYSSLACTVEIVDDVSAAINHIHEHGSSHTECIVTEDCEVAKT FLSQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLSNRWILRGTGQVVDGDRGVTYTYKELPIKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| PIRSF | 6 | 719 | 714 | 0.0 | ||
| Gene3D | 14 | 290 | 277 | 4.6E-79 | ||
| PANTHER | 17 | 719 | 703 | 0.0 | – | |
| TIGRFAM | 17 | 718 | 702 | 0.0 | ||
| SUPERFAMILY | 17 | 284 | 268 | 1.57E-48 | ||
| Pfam | 17 | 262 | 246 | 2.8E-31 | ||
| PANTHER | 17 | 719 | 703 | 0.0 | – | |
| PRINTS | 50 | 64 | 15 | 1.4E-55 | ||
| PRINTS | 94 | 122 | 29 | 1.4E-55 | ||
| PRINTS | 134 | 155 | 22 | 1.4E-55 | ||
| PRINTS | 177 | 204 | 28 | 1.4E-55 | ||
| PRINTS | 236 | 256 | 21 | 1.4E-55 | ||
| Pfam | 294 | 571 | 278 | 3.1E-7 | ||
| Hamap | 296 | 702 | 407 | 33.908 | ||
| SUPERFAMILY | 298 | 701 | 404 | 8.27E-93 | ||
| CDD | 299 | 698 | 400 | 0.0 | ||
| Gene3D | 304 | 699 | 396 | 4.7E-153 | ||
| TIGRFAM | 304 | 691 | 388 | 8.8E-136 | ||
| Coils | 313 | 333 | 21 | - | – | |
| Gene3D | 514 | 660 | 147 | 4.7E-153 | ||
| ProSitePatterns | 609 | 630 | 22 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Glutamate-5-semialdehyde dehydrogenase activity | Catalysis of the reaction: L-glutamate 5-semialdehyde + NADP(+) + phosphate = L-glutamyl 5-phosphate + H(+) + NADPH. | ||
| Biological process | Proline biosynthetic process | The chemical reactions and pathways resulting in the formation of proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi1g1v0578400.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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