Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0590100 |
| Transcript ID | LotjaGi1g1v0590100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cell division control protein 45-like protein; TAIR: AT3G25100.1 cell division cycle 45; Swiss-Prot: sp|O74113|CDC45_SCHPO Cell division control protein 45 homolog; TrEMBL-Plants: tr|W9RYN1|W9RYN1_9ROSA Cell division control protein 45-like protein; Found in the gene: LotjaGi1g1v0590100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:112999473..113002140) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTCGCCGCGCGCTTCCAAATTTTTCAAATTTCACGAAACTAATAACATTCCACTCCCTCTTTCAATTTTCAAACACC TCAATTCAATTTCTTCTTACACTCCAAAAACCAAATTCAAATTGCAATAAACCTTCATGAACCACCACCACCACCAAATT ACCCACATCCATTCTTCTTCTTCTTCCACCGATGGTGATAGAAAACAGCGTCCATTCCTTCTACACCAAGCTGCGTGAAT CAGCACGCGCCACTTCTTCCTCCCCAGTCCTCATCTTCCCTTCAACCTCCGACGTCGACTCGCTCTGCGCCCTCAAGATC CTCTTCCACATCCTCCACTCCGATGCCATCCAATACGCCTGCTACCCTGTCTCGTCTTTCAAGGAGATTCACAACTACAT CAACTCCAAAAACGACCACCCTGTCTCCGTCGTTTTGATCAACTGGGGCTGCCACAGAGACCTCACCACAATCCTCAACC TCAACCCTAGCTCACGCGTTTTCGTCGTCGATAGCCACCGCCCTGTCCACCTCAACAACCTCCGTCACCAAAACGACGCC GTCGTTGTCCTCTTCACCGACGACGACCAGAAGGAAGCTAACCAGATCTACGATTTCAGTTTCCCCCTCGAAGATTTCGC TAACGCCGCCACCGAGTTACCCGAATCGGAAGATTCAGGATCCGAATCGGAAAGTAGCAGCGACGAAGATGAAGAAGAAG GAGAGACTGGAAGTGGAAGGAAGAGGAAGAGGGATTCGAATTCGGTGGAGGAGGAGGATCCGGTGAAGCTATACAAGAAG ATGAAGAAAGAGTACTACGGATTCGGAACTTTTCACGGGAAACCCTCGGGTTTTCTCATGTTCGAATTGGCTGATTCTCT TGGGAAGAACACAAACGAATTGCTGTGGCTCGCTTGCGTTTCGTTAACGGATCAATTTGTGCATGAGAGGCTCAGCAAGG AGAGGTATGAAGCCGGTGTGATGGATCTGGAGCATTACATGAACAGTCCCTGTAACCTAGAGGCTGTGACTTCGGTCACG CTCAAAGACGGGACCAAAATTCGTGCACCGAATCAGTCGCGGATTGTGAATGAGGAAGAACCGATGCTTATGCTGTTGCA GGAATGGAACCTTTTCGATTCGATGTTGTGTTCTTCTTACATCGCGACGAAATTGAAGACTTGGAGTGATAATGGGATGA AGAAGCTGAAGCTAATGCTTGCGAGGATGGGTTTTGCGCTCGTGGATTGTCAGCAGAAGTTTCAGTACATGAACATTGAG GTGAAACGGAAGATGAAACACGGTGATTTCAAGAAGTTCTTGACGGATGAGTATGGGTTGACTGATTTTTACTACCGGAG CTTTCTCCGTATTCATGGGTATAGTTCTAGGGTTTCTGCGGCAGATGTGGTGTATGGTGTCACCGCGCTTCTTGAATCGT TTGTGAAACCTAAATCCGATGAGGATGGTGACGGTGGTACTTGTGCTTCGAAGAAGCAGTTTGGGATGGCTTATGATGCA CTTTCATTGAGCAATCTTGACAAGCTTAAAGTTGGGATGCAACAAGCTATTAAGATCCAGAGGTCGATTTTGAGACAAGG AAGCATAGCGGTTACGAAGAATGGGTGCATTCGAAGTTGTAGGAAGTTCCGTTGGATGAAGCTTGAGGATTCCGTGGATG CTAAGCTGTTGGGGTACCCACAGGCATTGACAAAGTTTGGTTATTTTGTGATGGATGCTTTGAAGGAAAAGGGGGCAAGG ATGAAGCCTCTGCTCTGTGCTTGTTTGTCTCAGGAGACTAATAAGATGCTGGTTGTTGGAGTGTGTGGGAGGCCACGTTT GGGTGGCGGTCAGGGAAACGCGTTCGGAGTTGCCTTCAGCAAAGCAGCTCAGGATATTGGGGCAGAGTATTTTCATGAGC TGTTCGAGTCGTCGTGGATTGTTCTCGAGGCTAATGTTGTAAACTCCTTCATGGTGAGGTTGACTGAGAATCTGTGAGCG ATGCTGTTGTTGAGGATGGTATTTTCTTCTCTAACTGCAGTGCCTTGCCTGAGATTATTAATAAATGATGTTAGGTTGCT GGTGTTGCACCAAAATAGGACTATTTGTTTTTAGTCTTACGAATTATGATTTATATGCAAAGCATCTTCATTTGAATTTC TTTCTCATTCTATTCCCTCTCTGATTTGTTAACTTAGACACTTTTCTTGTAAACATATGCCTTGTTGTAATTTGGAAGAA ACAAAACCTTGGAGTTTCTTTACAGGAAACAATACTCAAAATTTCCTAAGACTTGTAATTTGGAAGAAACAAGACCTTTG GGGTTTCTTTACAGGAAACAAGTACTCAATTTCCTAAGAGTAGTATATTTCAGGTCTTAATTACCAGTATTCCCTTGGTC TTGTTGAATTGTATTCAAAGATCGGAAGGTTGGCACTTGGTACAAGGAAAACCAGATAGTCCTGTATATTTCTTTTAACA TTTCGCAGAAACATATGTTTTTATGTTTTAGTACGTTTTGCTCTGGACATTTCAGCAGTGTTGCAAATTTGGTTGTGTAT ATTAGTACAATTGGTAGATCGTGCACTCTCTTTTCTTTCTTTATATGCCTGCTAGTGAGAACATATATGCATGTATAGTC TTGATAAGTAGTGAATTTGCTCCTAGCG
CDS sequence (LotjaGi1g1v0590100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGATAGAAAACAGCGTCCATTCCTTCTACACCAAGCTGCGTGAATCAGCACGCGCCACTTCTTCCTCCCCAGTCCT CATCTTCCCTTCAACCTCCGACGTCGACTCGCTCTGCGCCCTCAAGATCCTCTTCCACATCCTCCACTCCGATGCCATCC AATACGCCTGCTACCCTGTCTCGTCTTTCAAGGAGATTCACAACTACATCAACTCCAAAAACGACCACCCTGTCTCCGTC GTTTTGATCAACTGGGGCTGCCACAGAGACCTCACCACAATCCTCAACCTCAACCCTAGCTCACGCGTTTTCGTCGTCGA TAGCCACCGCCCTGTCCACCTCAACAACCTCCGTCACCAAAACGACGCCGTCGTTGTCCTCTTCACCGACGACGACCAGA AGGAAGCTAACCAGATCTACGATTTCAGTTTCCCCCTCGAAGATTTCGCTAACGCCGCCACCGAGTTACCCGAATCGGAA GATTCAGGATCCGAATCGGAAAGTAGCAGCGACGAAGATGAAGAAGAAGGAGAGACTGGAAGTGGAAGGAAGAGGAAGAG GGATTCGAATTCGGTGGAGGAGGAGGATCCGGTGAAGCTATACAAGAAGATGAAGAAAGAGTACTACGGATTCGGAACTT TTCACGGGAAACCCTCGGGTTTTCTCATGTTCGAATTGGCTGATTCTCTTGGGAAGAACACAAACGAATTGCTGTGGCTC GCTTGCGTTTCGTTAACGGATCAATTTGTGCATGAGAGGCTCAGCAAGGAGAGGTATGAAGCCGGTGTGATGGATCTGGA GCATTACATGAACAGTCCCTGTAACCTAGAGGCTGTGACTTCGGTCACGCTCAAAGACGGGACCAAAATTCGTGCACCGA ATCAGTCGCGGATTGTGAATGAGGAAGAACCGATGCTTATGCTGTTGCAGGAATGGAACCTTTTCGATTCGATGTTGTGT TCTTCTTACATCGCGACGAAATTGAAGACTTGGAGTGATAATGGGATGAAGAAGCTGAAGCTAATGCTTGCGAGGATGGG TTTTGCGCTCGTGGATTGTCAGCAGAAGTTTCAGTACATGAACATTGAGGTGAAACGGAAGATGAAACACGGTGATTTCA AGAAGTTCTTGACGGATGAGTATGGGTTGACTGATTTTTACTACCGGAGCTTTCTCCGTATTCATGGGTATAGTTCTAGG GTTTCTGCGGCAGATGTGGTGTATGGTGTCACCGCGCTTCTTGAATCGTTTGTGAAACCTAAATCCGATGAGGATGGTGA CGGTGGTACTTGTGCTTCGAAGAAGCAGTTTGGGATGGCTTATGATGCACTTTCATTGAGCAATCTTGACAAGCTTAAAG TTGGGATGCAACAAGCTATTAAGATCCAGAGGTCGATTTTGAGACAAGGAAGCATAGCGGTTACGAAGAATGGGTGCATT CGAAGTTGTAGGAAGTTCCGTTGGATGAAGCTTGAGGATTCCGTGGATGCTAAGCTGTTGGGGTACCCACAGGCATTGAC AAAGTTTGGTTATTTTGTGATGGATGCTTTGAAGGAAAAGGGGGCAAGGATGAAGCCTCTGCTCTGTGCTTGTTTGTCTC AGGAGACTAATAAGATGCTGGTTGTTGGAGTGTGTGGGAGGCCACGTTTGGGTGGCGGTCAGGGAAACGCGTTCGGAGTT GCCTTCAGCAAAGCAGCTCAGGATATTGGGGCAGAGTATTTTCATGAGCTGTTCGAGTCGTCGTGGATTGTTCTCGAGGC TAATGTTGTAAACTCCTTCATGGTGAGGTTGACTGAGAATCTGTGA
Protein sequence (LotjaGi1g1v0590100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVIENSVHSFYTKLRESARATSSSPVLIFPSTSDVDSLCALKILFHILHSDAIQYACYPVSSFKEIHNYINSKNDHPVSV VLINWGCHRDLTTILNLNPSSRVFVVDSHRPVHLNNLRHQNDAVVVLFTDDDQKEANQIYDFSFPLEDFANAATELPESE DSGSESESSSDEDEEEGETGSGRKRKRDSNSVEEEDPVKLYKKMKKEYYGFGTFHGKPSGFLMFELADSLGKNTNELLWL ACVSLTDQFVHERLSKERYEAGVMDLEHYMNSPCNLEAVTSVTLKDGTKIRAPNQSRIVNEEEPMLMLLQEWNLFDSMLC SSYIATKLKTWSDNGMKKLKLMLARMGFALVDCQQKFQYMNIEVKRKMKHGDFKKFLTDEYGLTDFYYRSFLRIHGYSSR VSAADVVYGVTALLESFVKPKSDEDGDGGTCASKKQFGMAYDALSLSNLDKLKVGMQQAIKIQRSILRQGSIAVTKNGCI RSCRKFRWMKLEDSVDAKLLGYPQALTKFGYFVMDALKEKGARMKPLLCACLSQETNKMLVVGVCGRPRLGGGQGNAFGV AFSKAAQDIGAEYFHELFESSWIVLEANVVNSFMVRLTENL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 601 | 601 | 2.0E-233 | – | |
| PANTHER | 1 | 601 | 601 | 2.0E-233 | ||
| Pfam | 26 | 598 | 573 | 9.0E-151 | ||
| MobiDBLite | 155 | 197 | 43 | - | – | |
| MobiDBLite | 160 | 176 | 17 | - | – | |
| MobiDBLite | 177 | 197 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | DNA replication initiation | The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate. |
Expression pattern of LotjaGi1g1v0590100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…