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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0590800 |
| Transcript ID | LotjaGi1g1v0590800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ethylene-responsive transcription factor-like protein; TAIR: AT4G13040.1 Integrase-type DNA-binding superfamily protein; Swiss-Prot: sp|Q56XP9|ERFL1_ARATH Ethylene-responsive transcription factor-like protein At4g13040; TrEMBL-Plants: tr|I3T6G3|I3T6G3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0590800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113074446..113080479) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAAATAAAAATAAAAACAAAAACAAAAGGTGGTAGATGCATGAGCCACAACATAACACAACAACAACAACATAGACA TTATCTCATATTACCACACTCACCACCTTGACTTCCCCAAATATTCCTATAATTCCCCAAAATTCATATAATTTCTCAGT TCTCACCACCCCAACTTTGGTTCTCTCTTCTGTGCTGCCACCTTATCTAACCCTTCTCTGATTCAGGTACAGTCTTCACC AATAACAATGGCTTGTTCCGTACGGTTTTTGTCTCTTCTTGTTCATGTCCTTCACTCTTTCCTTTTTTGGTTGTCATGAG TTTTCTGGTGATGGGCATTTTGAGTTGACTGCTTTGGAGGCTAAAGACTTGGTCTTTCTCTTGTTGGCTTTTGTGGGTGT GTCTTGAATTTTGTTGTCAATGTGTGTTTTGTTTGTGCTGTGTGTGGGTCAAAATGGGTTTTTTACCAACCCTTTCATGA TGGGGTTGACTTCAACCCAAGGTGGAAAGACTTCGTTGATGCGCGTGATTTTTGTTTCCAGATCTTTATGCCATTTAATG TTCTGGGTATGTGGGGAGTTTCCTTATGCAAACTATGATATCAACTTTTCTTTTTTCAGAAAAAATTACTATCTTTTTCT TCTTTGAAATAGTTTGTCATCTCTCAGTTTTGAACAGATTGATGACACTTTCTGCTATGATGAAATTGGATTAACAATGA GAACAATCTTTTACAAAGATTTAAACAGGTTGAAATTGTATCATAATCAAGGTTTCTCTACATTAGTATCTGTTTGTTTA TGGATGAGTTTGGTCAAGGTGGTCTAAGCAAGAAGACATGATCACTTTGTATGTAGTACTGCACAAAAGTCAAAACAGGA CAAACTTTTAGCGAAACCCTGTATGTTGGATTTACTTCTTTTTGTTTAGCCAATGATTTCCTTATTCACTGTTAACTTCT GGTGATTATCTACTTAGTTTTAGGTCCTTGAACTAGTTAAAGACCATTTTTTTATGGTATAAGTAGTCATGCACCTTCTA AGAGACCTTTTGCATTTGCTCATTAGTTATAAATGATTTTGATATTTGGCCTGACATTATTCGGTTTTACAGTATTGAAC TGATTTTGGAACTTTCTTCGATCTAATTTTCGTTCTCATCTGAACTGTCCTTTTGTGTTATAGCTACCTTTCCTCCGAAG TTGAAGGAAATTAAACATTGTGCTTTGGTAAAGAGACTGGAACTAACAATGGTAAGCTTAAGAAGGCGCAGGCTTTTGGG ACTATGCTCAGGTATATTTTGCCACACATTTGTTATATATTGTTGAGTAGTGTAGCCAAATATTGGCCATGGCGGAATTC CAGCAAGCCGCCATGGTCGATATTCCGCCATAATCTGCCATAATCATGTATTTGGCAGTGACTAAGTGAGTTTTCGAATA ATTTTTTGCTTTTGCAGGAAGCAGTTCATTTGTCACTCCACTCCCTCTGTATTGCGAGAATCTAACTGGTTCTGAAAATT CAAACTGGCATGCTAAACCTAAGAGTGAACAGCCTGTGCTTTCAGACGATGCAAGCATCCTGGACAGTGTACGAACAAGA TTACATATATGCTATTTTGAAGTCTTTTCCCCTATAAAGATAGTTCTATGTTTTCCAGTCCTCTTGGTATATATGTCTAG GGGTTCTTTTATTTCTGCATTGCTTTCACTGAATTATGCATCAGAATCATTCAGACATATCTTCTGAACAATGATAGTGG AATTCTCATTGTTGTTGCATTGCTTCATGTTGAATTGAAAAATCAGGCTTGAAAGAAACTTTGTTATTAGTTAGTCATTC TCTATCTTCGTTTGAAAATGATTAACATTCGAAAATTCAACAAATGAGAGTTGCTAATTTCAAATGAGAGTTTGCTAATT AGTGTATTCCCTTTTCTTCCTGTCTCCGAGATTTTGGCTAGTTAGTTGGATAACCTTGGTGATCAAACTATTCAATTTAA TCTTTAGGAAGTTCACAAAATAAGGTAAAATTGTATCTTCGAATTTGCTATTTTTTCTTAGAATGCTTTAAATTCCATTT TTGTACATTAATGATAAGAGTCATGCACAATTGACAACTCCTGTCCTCAAAATTTGAGTCAGTGTCACATTCATGCTTTT ACCTGCCAAACTCTCCAAATGAAGAGTTTATGCCCATGCACAAGCTCACAAATTTATACTCTGTAATTTTCGTTGGTATT AATTGACTCTTATAGCCATGTAAGTTGCATGATATAGTGTTCTAATAGGAAGGAAGAAGGTGAAAAATCTGTAGAAGAGT AAGCTGTAAAAGTGGTCATCATGCATGTTTTGCTTCTTGTCTTCTCCAACTGGCTGAATACATTAGAAACTTTTTTTCGT TAATGAAATATCTAAACCTTATGTACATCAATGAAAAAAAACAAGAAATGATGTAGATGCCGTGCTTATATGTCCCAAGT CCCAACTGCACTACATATTGAAGAATATTAGACAATATAGCTTCACTCTGAATTTGGATGTATAAGAGGCTTCAGCTTAT GTATGATACTGAACTTAAGGATATTTGAGTCTAACTAAACCCTCATCCTACTGCTTGTATGTAGTTCGCAGAATCAATCC TCCTTGTGACTGAAAAAGCATTATATAAAAGAAAGAAAGAAATATTGTTCCTTGTTTGTCTTTCTTTCAAATTTAGATTG ATAATATCTCCATGTCTGGTTGCATGAGTAATCACCCTTTCTCTTATGGTTGTTGTGATCCCTGTTGCTTTGATCTTCAG CAACAATAACGACCACCAAGCCTTAACCCATTGCGTGGGGTGGCTAGATTGATCAATTGATGCAATTGGGCTCTACCTTT CAATACTAAAACTAAAAAATGACCTAGATTGACAAAATATCATCTAGTGACCAGAGGTGATCTAAATAGATGTTTACACA GTTGATAAAGTTAGAAAGTTATGCTGAACTGTTTTTTTCTTACCAGAATACCATTGTGCAAGAAGAACCAGGTTCATCAA ATATTTCTGGTTCAAGCTCATCGAAAGAGCAGCTTATGCAACAAACCCCAGGTTAGTTCTTTATTAGGCTCCTTTTTTCA TGCATGCTGTTTATGTCTGGTTCGTTTATAATGACTAAGCTGGCCTAGTAATTATTGGTATTTCCTTTATGATATGTTTT GAATCATTAAAAGTTTGTATATCATGTACGTCATATTCAGCATATGCCGCTAACTATAGCTGGTGACTTGCTAGTATGTT ACCTTTGGTTTTCTGCTCACTGTCTATTTCACATTGCATCAAATGTTTTGCAAATTGAATGCATGCAATTTTCCTGAATA GCCCATGGTCTATGATGCAGTACATCATTGATGAATTGTCTGAAAGAAACTGATCTAAATTCTGTTAGAAATTCAGTTTG ATCATAATCATATCTAAATTCAGTGGACAACCATTTTGAGCTTACTTTAATTGTTGTACTAGGGTAACATTGAATTTTCT ATTAGCTTTTTCATGGCTTTATTTATCTGTTACCTATTTTGCCCTGGATTTAGCAGGACCTCCTGTTAAACGTAGGAAGC GACATAGAAGAAAGAATTTGCACAATCAAGAGACATGCTTAATGAGAGGTGTCTATTTCAAAAATATGAAATGGCAAGCA GCAATAAAAGTGGACAAGAAACAGATCCACCTAGGGACTGTTGGGTCACAAGAGGAAGCTGCTCATTTATATGACAGGTA GTACTTCGAATTGTGAGAATATGCATTCCTTTATGTTGCGTTTTATAAGCTGCCAATGCAATATATGATGTTTTATGTTA TAATCATATATATTTTTGGAGCATTCCTAACTAGTTAAAATTGATGGAGTTCTGTAACCCCTGCAAAAACAAGACAAAAA AAACTCTGAATTTGTAATACACCCACTTCCTTTTTTCCCCGTTGTATTCCTTCTGTTTGTTTCTTCTCCTGCATAATTGT GTTTGGTTATAGGGCTAGTTAGGAAAACTGCTTTTGTGTGACAGATTGAAATCCTCTGTCCCCGTTTAGGGTGTGTTTGG GAGTTTTTAGGGGAGGGGAGCGTAGGACTTTGAGGAGAATGGGAGGTGATGGAAAGAGAGGGGGAAGGGGGGTGAAGCCC TTCCCTTGATTGGAAAATCCAAATTCCCCAAAATTGCCCAATTCGAGGGAACTCAAAAATATAACTAAAAAAGAGGGTTT TAGAGGGGTCTTGGAGGGTTTTTTAGAGATACCCCGAACCCTTTCCCCCCCTCTTTCAAGTCTCCCAAACAAGGGGAGAG CTTCTAATAAGCCTCCCCCTTCCCTTCCCTCCTCTCCAAAACTCAACTCACAAACACACCCTTAGTGTCCCCTTCCTTGT CCACTACTAAAATTGTGTCATGTCATTAAAAACACTCACTTAAGGTTATAACTGTCAAATTCATGCCTTTTTTCAATTGA TATGACACAATTTTATTGGTGGGATAGGGAAGGGGACACTAAACAGGGACAAAATATATCCATGTGTCAACATGCTTCAA TTTAAAGGATTTGAATACTTTGAAGAAGTCTACTTTTATTTTTCAAAGGAAGTACTGGTGCTACTTGCATTATCTTGATT TTATGTGTGCATGGTTCCAAATAATGTTGATTGATACATGTGGTAGAAGCTTGGTTGTTGTTGACGTGTTGTTGAGTACA TGGTAATATTACTTTTCAGTAGAGTTTGACTCATTTGAATGGCCATAAATGAATAGACATGGCAAATGCTTTACAATTCT ACACATGCACTCTTATGCAATATCAAGTAGCTGTTTTGGAACGTCTATGTAGCCCCGAATCCATTCTATAGCAAAGTCTA ATATGCAAGTGAGCAACTATACATATCTATCAGTGCTCAAAGGAAACATTTTGTAGGTACTCAATTATCTCAAAGAAAAA GAGTAAAATCTGATAGTTGTGATTCACTCACACGTCACTTTTATTCAACAACAACAAAAAAATCACTCCTCACTTTCTTT CCCATCTCGTTTCCACTCTCTTTCTCTTCCCATCTTCCACTTCTATTCCTATCTCATCGCTCATCATATTTCTCATTTAG AGCATGTCATTCCTTTACATATCATCATGATGTACTTAGCATGGATATATCTCATTTTTTTTCTCTAGGGCTGCTTTCAT GTGTGGGAGGGAGCCCAATTTTGAGCTTCCCGAAGAAGAGAAGCGGGAATTGCACAAATTCAAATGGGATGAATTCTTGG CAGTGACTCGGCAGGCAATCACACGTAAAAGTAATCTTTCTCTTTGAACAAAGTGGGTGTTTGGTTTCACAGTTTGCACA TAATCCAAAACACATTTACTCAGAAGCTATGGCTTGTAGCTTCAATCCAAAAATGATTCTGGAGCATTTCACTGTGGAAC CAAACATGCTAAAAGTCATATGCTTTCCTAGATTTCTTTTTTCTTAAATTTTAACAGTTTCATGCAACATTTTTTAGAGC ACAAGAGAAGGCTTAGTCCAGGGCCACTTGATAATGGCCTTGAACTGCTTCCATTGCAGAAAGATGATTGGGAGAGTAAG CAAGGTGTAAGTGGCTTCTCTGCTTGTGAAACATCAATCTCTAGAAAGTCATAATTCAGGAACCAGGAGTGAAGGTGGAA AACTCTTCTAGTTCCTACACTCCAACTCTACATGCTAGATCCATTTTTATTGTAGAAAAATTCATCATTATATTAGACAT TGATGGCATTGATTATCCTTAAAATATGCAAATTGTTACACCACCGTAATCCAATAAAGACTCCAAACCATGTTAGAGGT GTTGAAATCTCTATCAGTCATTCACTATTTTATTCTTACGATCGGTGGAAATAAAGATGCTTGTCTTCATATCTTCTTGT AAGGGATGTCTAAATGGGCGTTTCTGAGCCAGTTTGACTGCAGTGTTTATGTTTGTTGCGTTTAAATAATTAAATGGGAA GGAAAAAAAAAAGCAAATTGGCCCTTGATATTTG
CDS sequence (LotjaGi1g1v0590800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAAGCTTAAGAAGGCGCAGGCTTTTGGGACTATGCTCAGGAAGCAGTTCATTTGTCACTCCACTCCCTCTGTATTG CGAGAATCTAACTGGTTCTGAAAATTCAAACTGGCATGCTAAACCTAAGAGTGAACAGCCTGTGCTTTCAGACGATGCAA GCATCCTGGACAGTAATACCATTGTGCAAGAAGAACCAGGTTCATCAAATATTTCTGGTTCAAGCTCATCGAAAGAGCAG CTTATGCAACAAACCCCAGCAGGACCTCCTGTTAAACGTAGGAAGCGACATAGAAGAAAGAATTTGCACAATCAAGAGAC ATGCTTAATGAGAGGTGTCTATTTCAAAAATATGAAATGGCAAGCAGCAATAAAAGTGGACAAGAAACAGATCCACCTAG GGACTGTTGGGTCACAAGAGGAAGCTGCTCATTTATATGACAGGGCTGCTTTCATGTGTGGGAGGGAGCCCAATTTTGAG CTTCCCGAAGAAGAGAAGCGGGAATTGCACAAATTCAAATGGGATGAATTCTTGGCAGTGACTCGGCAGGCAATCACACG TAAAAAGCACAAGAGAAGGCTTAGTCCAGGGCCACTTGATAATGGCCTTGAACTGCTTCCATTGCAGAAAGATGATTGGG AGAGTAAGCAAGGTGTAAGTGGCTTCTCTGCTTGTGAAACATCAATCTCTAGAAAGTCATAA
Protein sequence (LotjaGi1g1v0590800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSLRRRRLLGLCSGSSSFVTPLPLYCENLTGSENSNWHAKPKSEQPVLSDDASILDSNTIVQEEPGSSNISGSSSSKEQ LMQQTPAGPPVKRRKRHRRKNLHNQETCLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFE LPEEEKRELHKFKWDEFLAVTRQAITRKKHKRRLSPGPLDNGLELLPLQKDDWESKQGVSGFSACETSISRKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| PANTHER | 2 | 201 | 200 | 1.3E-88 | – | |
| PANTHER | 2 | 201 | 200 | 1.3E-88 | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| Phobius | 21 | 27 | 7 | - | – | |
| Phobius | 28 | 233 | 206 | - | – | |
| MobiDBLite | 60 | 84 | 25 | - | – | |
| MobiDBLite | 60 | 100 | 41 | - | – | |
| SMART | 109 | 166 | 58 | 5.0E-4 | ||
| Pfam | 109 | 152 | 44 | 1.6E-5 | ||
| SUPERFAMILY | 110 | 154 | 45 | 1.11E-7 | ||
| Gene3D | 111 | 162 | 52 | 9.9E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi1g1v0590800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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