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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0601400 |
| Transcript ID | LotjaGi1g1v0601400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SPX domain protein; TAIR: AT2G45130.1 SPX domain protein 3; Swiss-Prot: sp|Q5PP62|SPX3_ARATH SPX domain-containing protein 3; TrEMBL-Plants: tr|K7K3P1|K7K3P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0601400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:114623275..114627024) extracted from Lotus japonicus Gifu genome v1.2.
CATCAAGTTAAGAATATACCCACTAACATTCCCTCATGGCCTCATCATCTTTAGGCCAATAAAAACCCCAATGTACTAAT TTGTATCTTCACCAAAAGTCAGTATATACCTATTTCCATTTACAACGTTTTGGATCTATATATATATAATTTGAGGGTAG GTAGTGAGGTGAGTGAAGAAGAGCATGAAGTTTGGGAAACTATTCACGCATCAGATTCAGGAGGCGGTGCCAGAATGGAG GAACAAGTTCTTGTCATACAAGAAATTGAAAAAGCTGATACGGAAGATACCAGAGTGTGGGAATGCTGAGGAGGAGTTTT TGTCTTTGTTGAACAATGACATCGACACACTCAATGAATTTTTCATTGATAAAGGGGAGGAGTTCATCATCCGTTATCAG GTTATATTGTGTACATGCACATATATCCTTGTTTATGTTTGCCAAATATTTATGGGTTTAATTCAGTTCTATGAAAAAAA ATTCCTCGTAATTTTTTTCCAGTGTGAAAACATTCCCATTGAAAACAAGCTCACATAAAATTTGGAGTAAAATTAATGGG TTAAAATGTTTTTATTCTAGGGGTGAATTGAATTTAGTCTCTTAAAGCAATATTTATAGCTTTTAGTCTCAATTATTATT GAAATAAGGGTAGTTGTTGTCGTGTTTTTTGTGACGGTTTTTGTGTACTAAGCAATTTTTAAGTGTAATAAATTATTTAT TCTTGGTTATAGTAGCAGTTTGAACCACCGCAAAATAGCTAATTTCACCCGATTCATTAATTTTGGGAACTAATAAAAGC TGTAATTTTTGTTTAAAAGGATCAAATCTTATTCACCCCTATTTTACAGGAAAAAAAATTAACCTAAAATTAATTCAATT AAAGGGTAATTTTTTTAACATATTAAAGGGTAATTTGAGATTGGAAAAATTGTGTATGAATGCAGGAGTTGCAGCAGGAT CAGAAGAAATCAATTAATTTATGTGGACCAAATGGCACGCAGCCATCAGAAATGGATAATAAGGAGGGGATGTATATATT ACTTAAGCATATTGTTGATTTGCATAGTGAAATGATTCTATTACTAAACCTCTGGAACATTAATCAAACAGGTACTGTTT TTTTTAGCCATTGTAAGTTTGAAATTCCCAAAGATTGCAATTGAACTTGCACAATTTTTTCTTCATTATTACATTCTTCA CACTACTAAATACTAATTCTTATAGTATTATATCACTTTTCATTAAATTTAAATCACCTATAAATCCACATATATTAGAA TCTTTATTCATTAAATATGTAAAAACCATAAGGGTGTAATTATGAGGGGATATGAAAGAAGCTCACCCCTTGGGAGATTT CAAAAGGGGATGAGTTTGAGGTATTTTAAAACCCCTTCATCCCCTCAAAAGAAATTTTTTAGTTACCTCAATTGGAGGGT TTTGTGAATTACCAAATAAGCAAAGGGCTTACCCCCTTCCCCTTCTCACACCCTCCCCTCCCCTTCATTCAAAGTCTTCA TCTCCCCTGCCTTAAACACTCCCAAAGAGAGCCTTAAGAGATTTTGATCAAAATGAGTAAATTATGATGTGTAAGTTTTC AATTTAACTCTTCTAAAATGAGGGAGTGAGTAAATAAGTTATGACAACTAAATTAACGATCGAGATTGTAATTATATGTA ATTGTACATATATCATGTGGCTTTGGTGCTATTTAAATCTCAATGACACAGCGGAACGCACAAAGATTTGCAAACACAAA ACCCTATGTAACAGAAAACTGGAATCCACCAGGATTTGAGAAAATTCTCGTTTTTTTTATTGTCAATAATAAACTTAAAT AGGCTATGTCTTACAAGTCCTTAAATAGGAAAAGAAAATATCCTAACAGAAAAATAAATAATATCCTAAAAATCCTAATT AAAAATAAAAGATCCTAATTGAAAATAAATAAGTTCCTAACAAAAAATAAGTAAGATCATAAAGATTCTAACTTAATTAG AAAAACATAATAAATCCTAAATTGATTTAAAAATACTAAAAATAATAACTTCCTAATTAATTGCTCCTGCATTAGACGAA AACACGCGCAACATCTTCATCAAAACGCGCAGCAAGCCTGTCTGCGTCACTCAACCATTAATTTTTTTTATGTAGCGGTT ATAATACGTTACATTATTATTTTAATTCACTTTACAAGAGCTAAATCCTTATGTTCTAATCTTATTTGTGTATATAAGAG GTTTTGTAAAGCACCGGACTAGATACTATCTTCATACCCTAAACTTTTTTTATTAGAAAAATATGTAAATTGCAATGAGT CTTTGTCAACTTGGTTCTTGAAATATGTAGTTGGTGGGGCTAAGGCTATCATTTCTTTAAGGTTCTCTAAGGTTCTGTTG TTTGCAATTGAGGTTGGGATATTGTGCTGATTATTGCCTATGAGCTATTTATCTACTTGGTGGAATATTGTTTTGAAGGA ATCTAGTGATGTTGGAACAGCTGGGGGTCATCATTTTATGTTCTTTTTTCTTATTACTCATTGGAAGTCTCATCTTGATC TTAGGAAGGGGTACTCTTTTTCCTTCACTAGGTTTTCCCAAGGGGATTTTTTCTAGTAAGGTTTTAATGAGGCCCCTTTC TTTGATCTCTTTTCTAAGGTGGGGTTGGTGGCGGGTTCTCTCTCTTTCTTTCTTTTTCTTTGGATCTTTTGCTTTTGTAC TCATTTTCTCCTTTATCTCTTTGTATTGGGTTGAAGTACCCCTTGTACTTCACTTAATATATTCATTTCATTGCCTATAA AAAAAAAAGGAAAATACTCAAAAGTTGAAGGTGTAATATTTCGGTCAAGTTAATTGCACGATCAAATTTGATCAATTAAA ACGTTGTTCAACTTAATTGATATTTTACTCATTTAGATACTTTCACATTCTGTACATCTAGAATTCTATAACTTGCGTTA GGAGACACCAATGTGAAAGTAACCCAAGTTCTATTTTTGGCTTTCAGTTGGGTTCAGCTGAAACCAAACACACATCCCTT CTTCGAGAGAGACTAACCTGTGCAAAATCATTGAGGAACTAAGTTTACCATTCACTCTATGTTTTGGAATTGTGAATCCA CTGATCTGACTATTGATTGATGAGTTCCTGCTTATAGTGCATTTTTCCATAAGGAACCTGCTCTTGACATGTTTATATAT GAAGAATTAAATATGATGGATTGAGTTTTGCAGGCTTCGCAAAACTTGTGAAGAAATATGAGAGGAGGACAAGCGGGCTC CAACGCTACCCATTCCTTCAGAAAGTTTTGGAGCATCAGTTTCTCACATCTGAATTCATTCCAAAACTTGTTACGGAATG TGAAAGCATAATAAATGAGGTAATTTTCCATGTTGGTGAAAATTCTAAAACACCAAATGAAGAAGCCATTGCATCTAATG GAGAACCTTTACTCCCAACCCAGCATGATGCAGCAGTGGTTGTGAAAGAGGGTGAGGTTTCAGAGTCAAACATAGAAAAG AGTTTGAGAGCACTTGGGAAATATAGAGATAATTTCTCACTTCAATCTCTAGTGCCCTTCTGTTTGAATGAAATGACCTA TTGTAGTTGCTGGAGATGCTTTTTATATGATTCGGCCAATGAGTTGTTATCTTGTCTTTTTCCCACTTGTGTTGGCCAAA GTAAGTTTGAGATTTGACCATGTTTATAATGTTCCATTCTTCAGCTGTTGTTAGTTTGGATTGTATGGAG
CDS sequence (LotjaGi1g1v0601400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTTTGGGAAACTATTCACGCATCAGATTCAGGAGGCGGTGCCAGAATGGAGGAACAAGTTCTTGTCATACAAGAA ATTGAAAAAGCTGATACGGAAGATACCAGAGTGTGGGAATGCTGAGGAGGAGTTTTTGTCTTTGTTGAACAATGACATCG ACACACTCAATGAATTTTTCATTGATAAAGGGGAGGAGTTCATCATCCGTTATCAGGAGTTGCAGCAGGATCAGAAGAAA TCAATTAATTTATGTGGACCAAATGGCACGCAGCCATCAGAAATGGATAATAAGGAGGGGATGTATATATTACTTAAGCA TATTGTTGATTTGCATAGTGAAATGATTCTATTACTAAACCTCTGGAACATTAATCAAACAGGCTTCGCAAAACTTGTGA AGAAATATGAGAGGAGGACAAGCGGGCTCCAACGCTACCCATTCCTTCAGAAAGTTTTGGAGCATCAGTTTCTCACATCT GAATTCATTCCAAAACTTGTTACGGAATGTGAAAGCATAATAAATGAGGTAATTTTCCATGTTGGTGAAAATTCTAAAAC ACCAAATGAAGAAGCCATTGCATCTAATGGAGAACCTTTACTCCCAACCCAGCATGATGCAGCAGTGGTTGTGAAAGAGG GTGAGGTTTCAGAGTCAAACATAGAAAAGAGTTTGAGAGCACTTGGGAAATATAGAGATAATTTCTCACTTCAATCTCTA GTGCCCTTCTGTTTGAATGAAATGACCTATTGTAGTTGCTGGAGATGCTTTTTATATGATTCGGCCAATGAGTTGTTATC TTGTCTTTTTCCCACTTGTGTTGGCCAAAGTAAGTTTGAGATTTGA
Protein sequence (LotjaGi1g1v0601400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKFGKLFTHQIQEAVPEWRNKFLSYKKLKKLIRKIPECGNAEEEFLSLLNNDIDTLNEFFIDKGEEFIIRYQELQQDQKK SINLCGPNGTQPSEMDNKEGMYILLKHIVDLHSEMILLLNLWNINQTGFAKLVKKYERRTSGLQRYPFLQKVLEHQFLTS EFIPKLVTECESIINEVIFHVGENSKTPNEEAIASNGEPLLPTQHDAAVVVKEGEVSESNIEKSLRALGKYRDNFSLQSL VPFCLNEMTYCSCWRCFLYDSANELLSCLFPTCVGQSKFEI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 213 | 213 | 1.7E-66 | – | |
| ProSiteProfiles | 1 | 150 | 150 | 24.327 | ||
| Pfam | 1 | 35 | 35 | 1.5E-9 | ||
| PANTHER | 1 | 213 | 213 | 1.7E-66 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cellular response to phosphate starvation | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate. |
Expression pattern of LotjaGi1g1v0601400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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