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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031142
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.657s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0310179.1
n.a. PREDICTED: SPX domain-containing protein 3-like [Glycine max] gi|356496328|ref|XP_003517020.1| chr0 161924377 161929249 +
2 domain predictions
1 GO term
Lj1g3v0672100.1
n.a. PREDICTED: SPX domain-containing protein 2-like [Glycine max] gi|356548579|ref|XP_003542678.1| chr1 8619608 8621543 -
2 domain predictions
1 GO term
Lj3g3v1451440.1
n.a. PREDICTED: SPX domain-containing protein 3-like [Glycine max] gi|356496328|ref|XP_003517020.1| chr3 18649380 18652947 +
2 domain predictions
1 GO term
Lj4g3v1880330.1
n.a. PREDICTED: SPX domain-containing protein 2-like [Glycine max] gi|356548579|ref|XP_003542678.1| chr4 25907252 25909835 -
2 domain predictions
1 GO term
Lj5g3v1073710.1
n.a. PREDICTED: SPX domain-containing protein 2-like [Glycine max] gi|356548579|ref|XP_003542678.1| chr5 17384523 17387478 +
2 domain predictions
1 GO term
LotjaGi1g1v0199500.1
n.a. SPX domain-containing family protein; TAIR: AT5G20150.1 SPX domain-containing protein 1; Swiss-Prot: sp|Q8LBH4|SPX1_ARATH SPX domain-containing protein 1; TrEMBL-Plants: tr|A0A0U1SH93|A0A0U1SH93_SOYBN SPX domain-containing protein 3; Found in the gene: LotjaGi1g1v0199500 LjG1.1_chr1 42200924 42203177 -
2 domain predictions
1 GO term
LotjaGi1g1v0601400.1
n.a. SPX domain protein; TAIR: AT2G45130.1 SPX domain protein 3; Swiss-Prot: sp|Q5PP62|SPX3_ARATH SPX domain-containing protein 3; TrEMBL-Plants: tr|K7K3P1|K7K3P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0601400 LjG1.1_chr1 114623275 114627024 +
2 domain predictions
1 GO term
LotjaGi2g1v0261200.1
n.a. SPX domain protein; TAIR: AT5G15330.1 SPX domain-containing protein 4; Swiss-Prot: sp|Q94A21|SPX4_ARATH SPX domain-containing protein 4; TrEMBL-Plants: tr|I3S328|I3S328_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0261200 LjG1.1_chr2 72995910 73000824 +
3 domain predictions
1 GO term
LotjaGi3g1v0206000.1
n.a. SPX domain-containing protein; TAIR: AT2G45130.1 SPX domain protein 3; Swiss-Prot: sp|Q5PP62|SPX3_ARATH SPX domain-containing protein 3; TrEMBL-Plants: tr|K7K3P1|K7K3P1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0206000 LjG1.1_chr3 30216910 30221706 +
2 domain predictions
1 GO term
LotjaGi4g1v0270900.1
n.a. SPX domain-containing family protein; TAIR: AT5G20150.1 SPX domain-containing protein 1; Swiss-Prot: sp|Q8LBH4|SPX1_ARATH SPX domain-containing protein 1; TrEMBL-Plants: tr|I3S3A7|I3S3A7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0270900 LjG1.1_chr4 63681795 63685104 -
2 domain predictions
1 GO term
LotjaGi5g1v0060400.1
n.a. SPX domain-containing family protein; TAIR: AT2G26660.1 SPX domain-containing protein 2 (SPX2); Swiss-Prot: sp|O48781|SPX2_ARATH SPX domain-containing protein 2; TrEMBL-Plants: tr|I3SQV7|I3SQV7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0060400 LjG1.1_chr5 10132196 10136514 +
2 domain predictions
1 GO term