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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0604500 |
| Transcript ID | LotjaGi1g1v0604500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GPI ethanolamine phosphate transferase 1; TAIR: AT3G01380.1 sulfatase and phosphatidylinositolglycan class N domain-containing protein; Swiss-Prot: sp|Q9R1S3|PIGN_MOUSE GPI ethanolamine phosphate transferase 1; TrEMBL-Plants: tr|K7K2J4|K7K2J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0604500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:114933667..114937552) extracted from Lotus japonicus Gifu genome v1.2.
TCGGATGATATCTTTGAGATAAAGGATGATTCTGAATTTCTTGTGCATGAAGCATTCAAATTTAAGATTCAATCTTGGTT GATATTGACAACCTATTTTTCTAGGTATGTCCATGGTACTCCCACTGTTTTCCGAAAATAGCCTCTTATCCCGGCTGACT TCCATATTTCTTGGCTTTGCGCCTCCATTCCTTCTTCTCTCCATCGGGTATTATCTCTTTGACCAAACTTCTTTCAGACG TTCTTTGAATATATTCTTGATGTAATGATGCATATGTTTTTACCATTTCATTTTTGAAACATTTGCAGATATGAAGCTTT ATTCTATGCTGCCTTTGCTCTTGTACTTATGGCTTGGATACTCTTTGAAAATACACTTCTCAACTTTAATTTTATGACTA AGTCATCAGGTTCCATTAAAAATGTTACAAATCATCTCATCCCTGGATCTGATAACAGATCTTTGCAGCTATCTGATGTG AGAATCGCATTGAGCTTTGTAAGTTTTTTCTTTTCTGTCTTATTTCCTTCAAATCTTGATTAAATTTGAGCAGCCCTTTT GAGTGAAGTATACTAGAGGAACTCCTTTTGAGATTTTATGAAATTACACAACCATTCTTAAGCAAAAAATTACACTGCCC TTGTTAACGCCTTTTGATTGATAGAGTCTCTAAAATGGGAAGGAATATTCAGCTTAACCCAACAATTAACAATGGTTTTC TTTTAATAGCTTTGCGACTTGTAATAGGCCTTCTTATGGAATCAGGATAATTCATCTCCTATTGTTACTTGTAACTGCCG GTAACAATAATGAAATGCAGACAACAATATTTCTGGTTACTTAAAAGGAAGATATTCATATTATAATGGTCCGGCAGCTT TGTTGAAATCTCTATGTTGCTCTCCGAATCTATTGGAAATCTTGATTGTTAAAATGTGCATGACGTTTGTTTGTTTCTTT TGGCCATGGCGTTTGTATTTAACATATAAATGTTTCACTCAGAAAGCCACATGGGCCTTAGGATAAGGATATGATCAGGG AAATGCAAAGATGTCTGGTTGCTGAAGTACAGAATATGTAACAGATTTGAATTGAAATAATCAAATATTTAAGATGTTTT CACAAGTAGTATAATGGAGCATATGACTGTTTAATGAACTAGATTTCATTTAGCTGATATACAAATAGTATTTGTCAAGA TTCAGGGCCAACTGAAGCATGTAGATTATGCTCAATGTAAATTAAGTACGCTTTTCACAAGTGATATTTTTTGTTTTTTT GACATTAACACTCTTTTGTATCATGCAGATGGTTTTATTCAACATTGCCTTTTTTGGAACTGGAAATTTTGCAAGTATTG CTAGTTTTGAGATTTCATCTGTCTATCGGTTCATTACTATCTTTAGCGTAAGTGAAAATTAAACTCCTTTCAATTTCCAA CTTACCTATCTTTAATAAGCTTTTGAACTGATATATTTCCTACCAATTGCAGCCATTTCTGATGGCGGCGCTACTGATCT TCAAGTTATTTATACCCTTCATACTTGTAATGTAAGTATTTGCAACTGTTCCACAAGATTACTTCTTTGAGACTAGAATT TCAAAAATTGATTGAAAAAGTCATTTTCTTGCTGACGATGCATCCCAACTAAATGATTTGTGATCATATTGACTTCTTAG GCTGTCGATTTTCATATGATTGCGTGTCACCAGTATTGTTTTTAAAAAATTGGCAACAATTTTTCCCTAGGGATTCATTC ACTTAAGCACTGATTGACTGTTGTCAGATCATTCGATATGTGTTGCACATTGTATGTCTTGAATATATCTGGTTTTTGTA TTTAATCATATAGAATATAACTTCATAGATCTTATCACAATTATTTCCTAGTTATTGGAGAAAATAATATTTCATCAGTA TAATCTGTAGATGCCAAATTTATTAGAAATGTTTCTCTGGTGTAATCTGTAGATTCCAAATTACATATTTCACAAATAAT ACTTGTAATCTGAATATTTTATTGATACACTCTTTGATATGTGATCTACAAATAAATGAGTTTAGCTCTTCTAAAGTAAA GGAGTCTCTTTAGAAAGTAAAAAATCATCACAGTCATTGACTGAGAAACTAATGGTTGATATTCAAAGTTCACCATAGTT TGCTATGCATGTGCAACAATAAGATCACAATCTCAACCGTTAATTGCCCAATGAGTGGCCGTGGTGACTTACTCTACCCA ATTATGTTACTCTCTCACTTTATAGTAGCTTAATTCCAAATACATTTAGATACAAGGGTGTAATGGTAAAGGAAAGGATC ATTCGAAATCTTGAAGATATGATCCTAATATCTTATAATTGGAAACCTTTTGTTCTGGGAATGAACATTGAGGATAGGGA TAGTACCTAGAGAGTGGAAAATTGTGCTAGAGAGAATGAGAATGAGAGAGAGAATGCTGAATTTCATGTGTTATTTTGTC AAATGAGCAAAAAGTCCCTTACAATTAACATCTACCTCCTATTTATAGGGCTTGGGTACTACCCATTGGGCCAATTGGGC CTCCGCGATTGAGGCCCAATTTAAGGCCAGGTTCCCGCCCTTGGGCGGGCTAAACCCTGGGCGTCGCTCCTCTAGGGGCT CGCCCAGTCCACTTTCCTATAATGCAAATATACACAAAATCAAATACAATCAAATCCCTTATAATCATATTACTCATAAT CTCAACAAGTTTTAACATTTTCTTGAGCTTGTTTCTTACTGACTTATTATTTACCGTAACAACTATGGTTCTGTATCTTC TGTTCAATTGTTCATTTTATATTTATTTGCAATGGACTGAACTGCAGATGTGCATTCAGTGCAATAACCAAACTGAACCA AGTTCCAAGGATGGGATGCTATTTTCTTGTTATATTGTTCTCAGACGTAATGACTGTTCACTTCTTCTTCCTGGTATATA CTCACCCTATTCTTTATAATTTTATTTAGTTTCAATAGTCTTCATTAAACTCTTTTATGTTCTCACAGTTCTTGATTTTT CATATTGTAAATATATTTGCCTTCACTTAATTATAGTAAATGCATGAGATCAATTGGTCAGCATAATAGAACAGTAAAAT ATCCCCTAGAAGTTACAATTGCTTTTCTTTTATTGCCGTCAACTTCAGTTCTTTCTTGTGTTAGTTTTCTGTTTTATTGG TTTCCTAGCACCACAGTTGTTGATAAATGTGAATATATAATTATAATTCAAGGTATGGCTAATGAAATAAGCTGTGCCTT TTTGTAATTTTCTTTCACTTTATATTTATTATTATAATATATGAAAAATAAGGTTACTGTTTGAAAGAGAGACAGAACAA GAGATAACAGGTAGAGAGAGATTGAGAAACCTTAAAGGCCATTGTTGGATATGATAGGACATAAAGCGTCGTAGCCGACC TCACCTAGTAGTGGAGAAAGACTTGGGTTATTAGAAATATTTCATATCTAATGTGAGGATCTGCAAACTTTTACTTATCC ATCAAATATAAGGATTTCAGTTATATACAACATGTCTTTCTGAGCTAGTTTGCTACTACTGGAAATTAAATTACTTTCAA GGCAAAATGATTGTGGTTTTAACTGCAATTGGATACTCATATTTTTCCATTTGCTAATTTTAATGCCTCAGGGTATATAT TTGAAGGCTAGTACCCTAATACTGAAATTTATGGTTGGCAGGTTCGGAATACAGGAAGTTGGATGGAAATTGGAAATAGT ATCAGTCATTTTGGTATCATGAGTGCCCAAGTTGTTTTTGTTCTCTTACTCTTTGCCCTCACAAATACATACACAAAAGA CATCCACTGTAATTCCGCAGTACCGTCTGCACGAAAGGCAAATTAG
CDS sequence (LotjaGi1g1v0604500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCATGGTACTCCCACTGTTTTCCGAAAATAGCCTCTTATCCCGGCTGACTTCCATATTTCTTGGCTTTGCGCCTCC ATTCCTTCTTCTCTCCATCGGATATGAAGCTTTATTCTATGCTGCCTTTGCTCTTGTACTTATGGCTTGGATACTCTTTG AAAATACACTTCTCAACTTTAATTTTATGACTAAGTCATCAGGTTCCATTAAAAATGTTACAAATCATCTCATCCCTGGA TCTGATAACAGATCTTTGCAGCTATCTGATGTGAGAATCGCATTGAGCTTTATGGTTTTATTCAACATTGCCTTTTTTGG AACTGGAAATTTTGCAAGTATTGCTAGTTTTGAGATTTCATCTGTCTATCGGTTCATTACTATCTTTAGCCCATTTCTGA TGGCGGCGCTACTGATCTTCAAGTTATTTATACCCTTCATACTTGTAATATGTGCATTCAGTGCAATAACCAAACTGAAC CAAGTTCCAAGGATGGGATGCTATTTTCTTGTTATATTGTTCTCAGACGTAATGACTGTTCACTTCTTCTTCCTGGTTCG GAATACAGGAAGTTGGATGGAAATTGGAAATAGTATCAGTCATTTTGGTATCATGAGTGCCCAAGTTGTTTTTGTTCTCT TACTCTTTGCCCTCACAAATACATACACAAAAGACATCCACTGTAATTCCGCAGTACCGTCTGCACGAAAGGCAAATTAG
Protein sequence (LotjaGi1g1v0604500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMVLPLFSENSLLSRLTSIFLGFAPPFLLLSIGYEALFYAAFALVLMAWILFENTLLNFNFMTKSSGSIKNVTNHLIPG SDNRSLQLSDVRIALSFMVLFNIAFFGTGNFASIASFEISSVYRFITIFSPFLMAALLIFKLFIPFILVICAFSAITKLN QVPRMGCYFLVILFSDVMTVHFFFLVRNTGSWMEIGNSISHFGIMSAQVVFVLLLFALTNTYTKDIHCNSAVPSARKAN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 191 | 191 | 6.9E-69 | ||
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 2 | 230 | 229 | 9.7E-85 | ||
| TMHMM | 13 | 35 | 23 | - | – | |
| Phobius | 20 | 53 | 34 | - | – | |
| TMHMM | 40 | 62 | 23 | - | – | |
| Phobius | 54 | 92 | 39 | - | – | |
| TMHMM | 93 | 115 | 23 | - | – | |
| Phobius | 93 | 112 | 20 | - | – | |
| Phobius | 113 | 131 | 19 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| Phobius | 132 | 155 | 24 | - | – | |
| Phobius | 156 | 166 | 11 | - | – | |
| TMHMM | 165 | 184 | 20 | - | – | |
| Phobius | 167 | 186 | 20 | - | – | |
| Phobius | 187 | 197 | 11 | - | – | |
| Phobius | 198 | 218 | 21 | - | – | |
| TMHMM | 199 | 218 | 20 | - | – | |
| Phobius | 219 | 239 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. | ||
| Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. | ||
| Molecular function | Transferase activity | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. | ||
| Molecular function | Mannose-ethanolamine phosphotransferase activity | Catalysis of the transfer of ethanolamine phosphate to a mannose residue in the GPI lipid precursor. |
Expression pattern of LotjaGi1g1v0604500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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