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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0607700 |
| Transcript ID | LotjaGi1g1v0607700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Argininosuccinate synthase; TAIR: AT4G24830.1 arginosuccinate synthase family; Swiss-Prot: sp|Q9SZX3|ASSY_ARATH Argininosuccinate synthase, chloroplastic; TrEMBL-Plants: tr|G7J524|G7J524_MEDTR Argininosuccinate synthase; Found in the gene: LotjaGi1g1v0607700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:115233458..115236909) extracted from Lotus japonicus Gifu genome v1.2.
GAGATACTCTTTGACTTTAACTCGTGCATGTTTGTAAATTCTTCAATCATTGATTCTGAAGCCAAGATCAATTTCGGGTG TCTGAATAGATTTTGGGAAACGAAAAAATTAATGCTATAAATCACTTGGTTGATGAAGTGTGAACTCTACATAAAGCAGT TTTTCTAGTTCAATTGTTTATCTTGAAAAATATGAGCTTGGAACAATGGTGTTTGAGTTCAACATTTAAGTTTGATGTTT GTAATAGTGATGAAATTTTCTTGACATGCAGTTATAAAAGCAGTGCTGCAAGATATAAAAATTCCTGAAACCAAGAATGT AACCGGGTTACGTGGGAAATTGAATAAGGTTGTGCTGGCTTACAGTGGTGGCTTAGACACATCAGTGGTTGTCCCCTGGC TGAGGTATATAACTTGTTCTGGTCCTTTTATTCAAAGTTCACCTAATTTGGCATTTTCTATCACCTTTTGTATAACAGTC TGTAGATAACTCTGTTAATTCACCGGTGTCCTGTATTCTTATTGAAAATTTACATGTAGATACCTTTCGCGAAATTGTGA TTATTACTTATACGAAGGTTTATTACATGCTTGCTTGTCCCTAGCAGAATCGTTTCCTTGTCATATCGCTTATTTGATGA TTTTTGCCTTGCAGAGAGAACTACGGTTGTGATGTTGTTTGCTTCACTGCTGACGTTGGCCAAGTATGTTATATCTTGAA ACTTCACTTTCTATAATCAAGATTACTATTTGGTAAATTGTGTTATTGGAATAGATGTTGAAAGATTGTAAAATTTTGAC TGGGGAAACTTGCTTTACACCATTTTTATATGCTGCATGTATGGTTACAAACACTTAATTCCATAGGGTGCACAAGAATT GGAAGGTTTAGAAGAGAAGGCCAAAGCCAGTGGAGCCTCCCAGTTAGTTGTGAAGGATTTGAAGGAGGAATTTGTTAGAG ACTATGTATTCCCTTGCCTGCGTGCTGGTGCACTTTATGAGAGGAAATACTTGCTTGGAACGGCAATAGCCCGCCCTGTG ATTGCAAAGGTACACTTCTGCTTAATTTTGATGTTCTTGTCTTCCATCTAAGTTAGTAGTAGCTATGTCAACCCTTAGAA ATATTCCTTTTTTTGCTTTATTTCTTATGTGTGAGATATTGTCCTCACTCCTCAGCAATCAGCATTAGTTCTCTGTCGTT TCTTTTTGCTCCAATATCATGGCCGCGTTTGGAAGAGCTTGTTTTAGCTCTTCTCATAGCATAGACACTTATGTAAGTGA CTGGTATAAAAATCGCTATGACTTGACCAGAAGCTGTTTTGAGCTTACTTTCATAAGCTTTTCAGATTAGCTTATGAATA AACACTTATACCTACATATAAGCAATTTTGCACTTATTTCAGTAAGTTTCTCAAATTAGCTCATGAATAAGCGCTTACGT GATAAGCTCTTATTGCCATAAGTGCTTAATTAAACTATTTACCCAAATTCACCCTATATTTCTCTTAATGGAGTCATTTC TTCTGTTAGCTCATAGTGCAGTATACACTTATATTTTAGAAGAATCATAATGATCAGGCAATGGCATATATATATTTTTT TGAACTTATATTAATGCCTACTGAATTGATGATAGGCCATGGTGGATATTGCCAAAGAAGTTGGAGCAGATGCTGTCTCC CATGGTTGTACAGGAAAAGGAAATGATCAGGCATGTACTTTATTATCAACTGATAACATTTCATCATGTCAATTATTTTG TTATATTTACGTATGGTTATTCAGGTTCGGTTTGAGCTCTCTTTCTTTGCTCTGAATCCCAAGTTAAATGTTGTGGCTCC ATGGAGGGAGTGGGATATTACAGGGAGAGAAGATGCTATAGAGTATGCTAAGAAGCATAATGTACCTGTTCCTGTAACCA AGAAATCAATATACAGCAGGGACAGGAACCTTTGGCACATAACCCATGAGGTGAGTTTTTCTTGAAGTTAACTAGGTTTT TATGATTTGTCTCATGGCTTCTTTTGTAGTCTAAGATCACTTTGAAAAACTTCGGGGAAATTTTCATGATCTGCAAAGTT ATTAATTGGATCATCTCAAGTCACAGGGGTAGCAATAGAGAAGAACAGTTTTTTTCTTATTATTGCAAATGTTCTCATCG GCATCTTCATTCCATGATTGGATATTACTCTTATTAATGATTCATGTATGCCTTTTCATTGTACATTTTGTTATTTCTTC TAAAAGCAAGAAAAACTTATAATTGAGTACCGAATGTAGACACATGAAGTATCAAATTGTAATGTGAAACCTCATTCCGA TGCTGTAATATGATAATTGGTTTATGCTCATGTACTCCAAAACTATTGATTGGATATTTGACATGTTAACTGCTTCTCTT ATATTTCCAATTTGTGCTACTGAAGGGTGATGTTTTGGAAGACCCAGCAAATGAACCTAAAAAGGATATGTACATGATAA CTGCAGACCCAGAGGATGCTCCCAATGAACCAGAGTAAGCATGTTTTCCACTGGCACAGATAAAGTTATTTTACAAATAA AAATCTTAATAATATTGAAACAGATAAAGTTATTTTACTGTTATCTTATGTTTAAAATAGGCTGTTTCAGGACATATTAA CCCAGTACTCTATGTCCATGCTTCTTTGGCTTCCTGAAAATGCACCAACCTACATGTTCAAACTTTACATCATTAGGTGT ATAGCATGTTTGGATGATCTTATGTTTACTCAGAATAAATTTTGATGCCCAGAAGCTACTTACATAAGCTTTTCCCCATG ATCGAATTTTCTAATAAAATCAATTGTCGAAGAATTTACAAACATGCATGTAGTTTCCCAAATTGCTCAGACACTTTAGC TATTTTGAACGTGTTGCAGATACGTGGAAATCGGGATAGAGTATGGTGTTCCTGTATCAGTGAATGGGAAGAGGCTTTCA CCAGGAAACTTGGTTGCCAAGCTGAATGAGATCGGTGGAAGGCATGGAATTGGCCGAGTCGACCTTGTTGAAGACAGGAT TGTAGGCATGAAGAGCCGTGGAGTTTATGAAACCCCTGGTGGCACCATCCTCTTCGATGCAGTGAGGGACTTGGAGTGCT TAACACTTGACAGAGAAACACTTCAGCTGAAAGACACATTGGCCCTCAAGTATGCAGAGTTAGTTTATGCTGGGAGGTGG TTTGATCCGCTCCGCGAGTCCTTGGACGCCTTCATGCATAAGATCACAGAGACCACAACAGGCTCAGTGACTTTGAAGCT CTACAAAGGTTCTGCTGCTGTGACTGGAAGGAAGAGCCCTTATAGTCTTTACAGAGAAGATATTTCTTCATTTGATACTG GGGATTTATACAATCATGCTGATGCTGTTGGCTTTATCAAGCTTTACGGTCTTCCAATGAGGATTAGAGCAATGATGCAA CAAGGCCTCTAG
CDS sequence (LotjaGi1g1v0607700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTAAATTCTTCAATCATTGATTCTGAAGCCAAGATCAATTTCGGGTGTCTGAATAGATTTTGGGTTATAAAAGC AGTGCTGCAAGATATAAAAATTCCTGAAACCAAGAATGTAACCGGGTTACGTGGGAAATTGAATAAGGTTGTGCTGGCTT ACAGTGGTGGCTTAGACACATCAGTGGTTGTCCCCTGGCTGAGAGAGAACTACGGTTGTGATGTTGTTTGCTTCACTGCT GACGTTGGCCAAGGTGCACAAGAATTGGAAGGTTTAGAAGAGAAGGCCAAAGCCAGTGGAGCCTCCCAGTTAGTTGTGAA GGATTTGAAGGAGGAATTTGTTAGAGACTATGTATTCCCTTGCCTGCGTGCTGGTGCACTTTATGAGAGGAAATACTTGC TTGGAACGGCAATAGCCCGCCCTGTGATTGCAAAGGCCATGGTGGATATTGCCAAAGAAGTTGGAGCAGATGCTGTCTCC CATGGTTGTACAGGAAAAGGAAATGATCAGGTTCGGTTTGAGCTCTCTTTCTTTGCTCTGAATCCCAAGTTAAATGTTGT GGCTCCATGGAGGGAGTGGGATATTACAGGGAGAGAAGATGCTATAGAGTATGCTAAGAAGCATAATGTACCTGTTCCTG TAACCAAGAAATCAATATACAGCAGGGACAGGAACCTTTGGCACATAACCCATGAGGGTGATGTTTTGGAAGACCCAGCA AATGAACCTAAAAAGGATATGTACATGATAACTGCAGACCCAGAGGATGCTCCCAATGAACCAGAATACGTGGAAATCGG GATAGAGTATGGTGTTCCTGTATCAGTGAATGGGAAGAGGCTTTCACCAGGAAACTTGGTTGCCAAGCTGAATGAGATCG GTGGAAGGCATGGAATTGGCCGAGTCGACCTTGTTGAAGACAGGATTGTAGGCATGAAGAGCCGTGGAGTTTATGAAACC CCTGGTGGCACCATCCTCTTCGATGCAGTGAGGGACTTGGAGTGCTTAACACTTGACAGAGAAACACTTCAGCTGAAAGA CACATTGGCCCTCAAGTATGCAGAGTTAGTTTATGCTGGGAGGTGGTTTGATCCGCTCCGCGAGTCCTTGGACGCCTTCA TGCATAAGATCACAGAGACCACAACAGGCTCAGTGACTTTGAAGCTCTACAAAGGTTCTGCTGCTGTGACTGGAAGGAAG AGCCCTTATAGTCTTTACAGAGAAGATATTTCTTCATTTGATACTGGGGATTTATACAATCATGCTGATGCTGTTGGCTT TATCAAGCTTTACGGTCTTCCAATGAGGATTAGAGCAATGATGCAACAAGGCCTCTAG
Protein sequence (LotjaGi1g1v0607700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVNSSIIDSEAKINFGCLNRFWVIKAVLQDIKIPETKNVTGLRGKLNKVVLAYSGGLDTSVVVPWLRENYGCDVVCFTA DVGQGAQELEGLEEKAKASGASQLVVKDLKEEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKAMVDIAKEVGADAVS HGCTGKGNDQVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHITHEGDVLEDPA NEPKKDMYMITADPEDAPNEPEYVEIGIEYGVPVSVNGKRLSPGNLVAKLNEIGGRHGIGRVDLVEDRIVGMKSRGVYET PGGTILFDAVRDLECLTLDRETLQLKDTLALKYAELVYAGRWFDPLRESLDAFMHKITETTTGSVTLKLYKGSAAVTGRK SPYSLYREDISSFDTGDLYNHADAVGFIKLYGLPMRIRAMMQQGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 45 | 443 | 399 | 1.1E-197 | – | |
| PANTHER | 45 | 443 | 399 | 1.1E-197 | ||
| Hamap | 47 | 443 | 397 | 54.491 | ||
| SUPERFAMILY | 48 | 212 | 165 | 4.19E-48 | – | |
| Gene3D | 48 | 218 | 171 | 9.5E-72 | ||
| TIGRFAM | 49 | 439 | 391 | 1.3E-154 | ||
| CDD | 50 | 434 | 385 | 0.0 | ||
| Pfam | 51 | 437 | 387 | 3.9E-162 | ||
| ProSitePatterns | 53 | 61 | 9 | - | ||
| ProSitePatterns | 162 | 173 | 12 | - | ||
| SUPERFAMILY | 217 | 443 | 227 | 1.23E-92 | ||
| Gene3D | 220 | 444 | 225 | 9.7E-97 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Argininosuccinate synthase activity | Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Arginine biosynthetic process | The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid. |
Expression pattern of LotjaGi1g1v0607700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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