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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0616100 |
| Transcript ID | LotjaGi1g1v0616100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BAG family molecular chaperone regulator 2; TAIR: AT5G14360.1 Ubiquitin-like superfamily protein; Swiss-Prot: sp|Q0WPX7|BAG2_ARATH BAG family molecular chaperone regulator 2; TrEMBL-Plants: tr|V7B4M2|V7B4M2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0616100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116289840..116291291) extracted from Lotus japonicus Gifu genome v1.2.
AAACAAACACTAAAAGTAATTTTCAATGCTCTTATTTTAAACTACATGATGATCAGCTTAAAATGAGTGATTATATGTTC ACATCTGCTTTTTAGCTGACATTCAATTGACATATAGTTAAACAGCAGGTTTTAATCGATGCAAACATTAGTAACAATTA AAAGCCGATGTTAAATCTATGTCAGCTGAGTGTCACTATAAAGCATATGTCTAACTTTTGTAACATTTCCAACTTAATAT TTAGGTAAGCTGGACACTCACTTCAGTATTTAATGAGCAACTATTTAATTGTATATTCATACACTTTTCTTCATCTTGAT GCACGCTTTCTAGTATTATATAACTGAACTAACTACTCAACTTCTATTTCTCCTTTCCCTTCACCCTGCCACTTCTTTCA AGAGAAAGAAAGAATGATGGTAAGGTTGAGGTCAATGAGGTTCAGCAGAAGCAGCAGCTCCAAGCTTAGAAATGGGAACA AAGCAACACCACAAACAGAAAAAGATTGCAGAAGCAATAGTGAAACCAAATGGGAAATAAGGCCTGGTGGCATGCTTGTT CAAAAAAGGGAGATCAGTAACCAAATTTCAGGGGATGGGATGATCACAATTATAGTGTCAACTGTGTCAGAGTCTCATGA CATTTCTATTGAAGCCACATCAACTTTTGGTAATTTACCTCATCCCTTTCTCATACTAACTCCAAATTATTATATTTTTT TTTTGTTAAAATTGAAAAAATAAAAAAATTTCATTTATGTGTAAGCGCATGTTTGACAATTTTTCTACAATTGACTCTTA AACCAAAAACTTTTGTGAGTAGTTTATGAGTTTCAATATTGATTCGGAGAAAAGATAAACTGATTTTTACCTTACTCTAA GTTTAATTTTTCAGATTATAAGATAATCCTTAAGTAAGCTTTTATGACAAAAGTTGGGAACCACTATAATAATTGCAGGA GAGTTGAAAATGATTCTGTCACTGGTAACAAGTTTGGAGCCCAGAGAGCAAAGGCTTCTATTCAAGGGGAAAGAGAGAGA TAATGATGAATATCTACATATGGTTGGGGTTAGAAACAAGGATAAGGTTCTTCTGCTAAAGGATCCAGCTCTGAAGGAGT TGCGTGTTTAAGAGTCCTACCCAGTGTATGACTAATTAATCAAACTCATTGTTAAGTAGTGCTAAGTGCTAACTATTAAG GAAGGTGGAGAAAATTGAATGCAATTATGGATCTTTTTCACTTGAGTTAGATGAGGAAGGAAGAACTTAATGTAATTTTC ATTATCGTTGGAAGCATTTCTAATTTCTTCAATTGAAAGTGTGTAAGCTTATGCTGCTCCACTAATTTTCACAGTTTGAT AACATTTTGTATGAACTTGATCATATGCGCCAGAGATTCTTTACAAATTACAATTCTCTCCAGCATATTATATTTTTAAA AGAACATCTCCT
CDS sequence (LotjaGi1g1v0616100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGTAAGGTTGAGGTCAATGAGGTTCAGCAGAAGCAGCAGCTCCAAGCTTAGAAATGGGAACAAAGCAACACCACA AACAGAAAAAGATTGCAGAAGCAATAGTGAAACCAAATGGGAAATAAGGCCTGGTGGCATGCTTGTTCAAAAAAGGGAGA TCAGTAACCAAATTTCAGGGGATGGGATGATCACAATTATAGTGTCAACTGTGTCAGAGTCTCATGACATTTCTATTGAA GCCACATCAACTTTTGGAGAGTTGAAAATGATTCTGTCACTGGTAACAAGTTTGGAGCCCAGAGAGCAAAGGCTTCTATT CAAGGGGAAAGAGAGAGATAATGATGAATATCTACATATGGTTGGGGTTAGAAACAAGGATAAGGTTCTTCTGCTAAAGG ATCCAGCTCTGAAGGAGTTGCGTGTTTAA
Protein sequence (LotjaGi1g1v0616100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMVRLRSMRFSRSSSSKLRNGNKATPQTEKDCRSNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIE ATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 13 | 13 | - | – | |
| MobiDBLite | 1 | 39 | 39 | - | – | |
| PANTHER | 2 | 141 | 140 | 1.3E-66 | – | |
| PANTHER | 2 | 141 | 140 | 1.3E-66 | – | |
| MobiDBLite | 8 | 23 | 16 | - | – | |
| MobiDBLite | 24 | 38 | 15 | - | – | |
| SUPERFAMILY | 59 | 134 | 76 | 2.14E-15 | ||
| Gene3D | 62 | 132 | 71 | 5.9E-21 | – | |
| CDD | 63 | 132 | 70 | 9.62115E-22 | – | |
| ProSiteProfiles | 64 | 132 | 69 | 12.836 | ||
| Pfam | 68 | 132 | 65 | 5.2E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0616100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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