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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0616300 |
| Transcript ID | LotjaGi1g1v0616300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|G7KZZ9|G7KZZ9_MEDTR Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0616300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116302779..116306542) extracted from Lotus japonicus Gifu genome v1.2.
CTTTTCCGAAAAATAGAAAATGAAAACAAAAAATGGATCATTAGATTTGGCACCCCAATCATTAGAAATGTCACCCCACT TACGGAAACTCAGTTTCCGAAATATTTCGGAAATAAGGTTTCCGAAGCAGTTTTTTACTCAAAAGTGTGGTTTTTTACTC AAAAGTGTGGTGTTAGATGTATTTTGAACTAAAAATCACGAATTAATTTCGGAATCTAAGATTCCGAAATAATTCGGAAC TTGAAAATCCAAAAATTTGGGGCGTGAAATCTAATGGTTGGGGTGGCAAATCTAGCTCTCCAAAAAATGTGAAGATGCAC TCAATTTTCCTTCTACTGGAAATGGAATTAACACCTCACACTCACTCACTCACTCACATAGAAGATAGCAAATGCAGCAC AGAACAACAGAGAAAGAGAACAAATCAAACAACTAAATAAAAAGCCACTCACTCATTCACTCTCTTGCAAATCAACCCAA TTCTGCCATCATCTGCCTCAGCCTCTCCAGATCATTCATCTCCATTTTTCGCGTAAGCTTTTTCGATCTTCCTCTTTCTT TGTTGATGTCTATGTGTAAGAATGACAAATTTGTGGGAGAGAATGAGAAATTTTTAGGTATGGAGAGAGTGGAGGAAAGG AAAGGAAACATATTTTAGGTACTAATAACAGTACCTAATAGTTTGTTATACTTAGAGTTCAATTACTGTTAATTAGTCTT TTCATCAGGGTTTTGAGGTTTATCACTATGTTAATCAGGATCATTTGGTGAGAAATTCTTAATTTTTATCATAAAATATC AGTTTGAAATGTTTTATAATCATTCACATGCATATGCCAAATTACAAATTCTTAATTTGGTTATGAGTACCTCAACACCA AATTGTTAGTGTTGAGGGACCTGGTATCTCAAAGGCTTCTTTGTAACTCTTCAAAGGCATGGATGGCAGGTATCTATGTC GGTAACGGCTGCGACAAAAACATGAAAAGTATTACTGTATTGTAATTTGATGTCATATAATTTGAATTTTTTTTCTTCAA TTTTTTTCATTACATTCTGTTTTATTTTATGAAGGGATTAATGGCCAAAAAATGTGAGGGACCTGCAATAGGAATTGATT TAGGCACTACTCATGTGTTGCTATATGGCAAGGACAGAACAATAGAGCTGAGATCATTCCCAATGAACAAGGAAACAGAA CCTCTCCTTCCTGTGTTGCTTTCACAGATACCCAAAGATTAATTGGTGATGCTGCAAAAAATCAGGCTGCAGTAAATCCA TCAAACACTGCTTTGGTAATTAATATTCTATAGTTTTTGCATCTTAATTTCATTCATGACTGCTATGTTTTGACCAGAAC AAAATGAATTATACATCATATTGTTTTTACTTTTGCAGATGCAAAGAGATTGATTGGTAGAAAATATCGCGATTCAGTTG TTCAGGATGATGTTAAGCTCTGGCCCTTCAAGGTCATTGCAGGAACTGATGACAAACCCACCATTGTTGTTAAGTACAAG GGTAAGGAAAAACGCCTTGTTCCTGAGGAAATCTCATCTATGGTTCTCTCAAAGATGAAGGAGATTGCTGAGGCATTCTT GGTGTCACCTGTGAAGAATGCAGTCATCACTGTGCCTGCTTATTTCAATGACTCTCAGCGAAAAGCCACCAAGGATGCTG GTGCCATTGCTGGCCTCAATGTTATGCGGATAATCAATGAACCAACGGCTGCAGGTCTCGCATATGGCCTTCAAAATAAA TCCAGTTTTGCTGGAAAGCGAAATGTGTTCGTCTTTGATCTCGGTGGAGGCACTTTTGATGTGTCTATTCTCACAATCAA GGATGACAGCTTCGAGGTGAAGGCCATTGCTGGTGACACTCACCTTGGAGGAGAGGACTTTGATAACAGAATGGTAGACC ATTTTGTTAAGGAGTTTAAGAGGAAGCACAAGAAGGACATTAGTGCGTGTGAGAAGGCAAAAAGGACACTCTCATTCACC GCAGATACCACCATTGAGGTAGATGCTTTATTTGAGAACACTGACTTGTGTTCAACAATTACTCGCATCAGATTTGAGGA ACTGACCATTGATCTCTTTAAGAAGTGTATGGAGATAGTTGAGAGGTGTCTTGAAGACTCTAAGATGGACAAGAGTGACA TTGATGATGTTATCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAACTCTTGCAAGATTTTTTCAATGGGAAG GAACTATGCAAGGGCATCAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAAGCGGCTTTGTTGACTGATGGCGC TACGAATGTTCCAAACTTGGTATTGATGGATGTTTCACCACTGTCTCTTGGTATATTTACAAGAGGAGATCTCATGAGTA TAGTGGTTCCAAGGAATACCACTATTCCTATAAAGAAGAAACAAAGATACATCACACCTGAAGATAACCAATCCCGTATC TGGATTGAGGTTTATGAGGGTGAGAGGACAAGAGCCAGTGTTAACAATTTGTTAGGCTCTTTTATTCTTTCTGGCCTCCC TCGTGCTCCTCGTGGCTATCCTTTTGATGTGTGCTTTGCTATAGATGAAAATGGTACTCTAACTGTTTCTGCTGAGGATG AAATAACTGGTAATAAGAATGAGATTACCATTACCAATTGCAAAGGAAGACTATCTTCTCAACAAATTAAGAGATTGATT AAAGAAGCTGATAATTATAAGGCTGAAGATATGAAGTTCAAGAAGAAAGTTGAAGCGGTAAGAGCTGTTGATGATTACCT TTACAACATGAAAAAGCTTATGAGGGATGAGAGTGTCAGTTCTAAGCTTCCCCCAATGGTCCAAGTAGAAATCAATTCAG CTATTGTAAAGGGCGAAAAGTTGCTTGATGGTGGCCAGAAGAAAGAGGCGTTTGTGTTTGTTGACTTGTTAAGGGAGCTT AAGAGCATATTTGAACCTGTGATGGCCAAGATCAACAATGGTTGGACTCATAAGGACAGTGATGAAGAGTATGGAAGCAC TACTGGGCCGACCCAGTCCATTGCTACTTCGACCAGGCGCAAGTTGAAGAAGAAGCTTAGTTGGTTTAATAATTTTGCTT GAATGTTTTTAATGTTTTTAGTTGACATTCTGAATATTCCACTTAATAGGATCAAGTTACCTCTAGGGCTATCCTTACTT GAAAGAACAATTATGTTAGAATGAAGTTGTAGCATATGGTAGATTTGTTTACAAAACAACTGCCAGTTAGTAAGTTAGAG TCACTGAGACAACTGAATGGAATTTACAGTGCCTAAAGCAAGAGGAGTGTTAATTATATGCTTCAGGGCTGCAACTAAGT ACAGTAAAGTAAGTTTTAAATTTGTTTTTTCCTGATGTAGTGTTTGAAATAATTAAGTTTGTTACAGTTTATGGCTTAAA TCATGAAAACAATGGATTGGTTGCTTAATCTTGGGGATAATGGTTAGTGGCCTAAATCAAGGAGAACCACTCTTCTATTT TTCTAGTTTTGCTTTTGCATTATAAATGTAACAGATTGCAATGAATTGAATGTAGAATTCATTTTCTGCAATTGTATTTT ATTTTTTTCAATTGAATTAAATGTAACAGATTGCTATGAATTGAATGTAGAATTCATATACTCCTTATCTCTCTATTTTT CATTTTCACAACAAGCAATGCTTTGAGAACCAAGATATATTCACACACCAAACTGAATCCACTAGATTACTTCTTTGCCT GTCA
CDS sequence (LotjaGi1g1v0616300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTCTCAAAGATGAAGGAGATTGCTGAGGCATTCTTGGTGTCACCTGTGAAGAATGCAGTCATCACTGTGCCTGC TTATTTCAATGACTCTCAGCGAAAAGCCACCAAGGATGCTGGTGCCATTGCTGGCCTCAATGTTATGCGGATAATCAATG AACCAACGGCTGCAGGTCTCGCATATGGCCTTCAAAATAAATCCAGTTTTGCTGGAAAGCGAAATGTGTTCGTCTTTGAT CTCGGTGGAGGCACTTTTGATGTGTCTATTCTCACAATCAAGGATGACAGCTTCGAGGTGAAGGCCATTGCTGGTGACAC TCACCTTGGAGGAGAGGACTTTGATAACAGAATGGTAGACCATTTTGTTAAGGAGTTTAAGAGGAAGCACAAGAAGGACA TTAGTGCGTGTGAGAAGGCAAAAAGGACACTCTCATTCACCGCAGATACCACCATTGAGGTAGATGCTTTATTTGAGAAC ACTGACTTGTGTTCAACAATTACTCGCATCAGATTTGAGGAACTGACCATTGATCTCTTTAAGAAGTGTATGGAGATAGT TGAGAGGTGTCTTGAAGACTCTAAGATGGACAAGAGTGACATTGATGATGTTATCCTTGTTGGTGGTTCTTCTAGGATTC CCAAAGTGCAGCAACTCTTGCAAGATTTTTTCAATGGGAAGGAACTATGCAAGGGCATCAATCCTGATGAGGCTGTTGCT TATGGTGCAGCTGTGCAAGCGGCTTTGTTGACTGATGGCGCTACGAATGTTCCAAACTTGGTATTGATGGATGTTTCACC ACTGTCTCTTGGTATATTTACAAGAGGAGATCTCATGAGTATAGTGGTTCCAAGGAATACCACTATTCCTATAAAGAAGA AACAAAGATACATCACACCTGAAGATAACCAATCCCGTATCTGGATTGAGGTTTATGAGGGTGAGAGGACAAGAGCCAGT GTTAACAATTTGTTAGGCTCTTTTATTCTTTCTGGCCTCCCTCGTGCTCCTCGTGGCTATCCTTTTGATGTGTGCTTTGC TATAGATGAAAATGGTACTCTAACTGTTTCTGCTGAGGATGAAATAACTGGTAATAAGAATGAGATTACCATTACCAATT GCAAAGGAAGACTATCTTCTCAACAAATTAAGAGATTGATTAAAGAAGCTGATAATTATAAGGCTGAAGATATGAAGTTC AAGAAGAAAGTTGAAGCGGTAAGAGCTGTTGATGATTACCTTTACAACATGAAAAAGCTTATGAGGGATGAGAGTGTCAG TTCTAAGCTTCCCCCAATGGTCCAAGTAGAAATCAATTCAGCTATTGTAAAGGGCGAAAAGTTGCTTGATGGTGGCCAGA AGAAAGAGGCGTTTGTGTTTGTTGACTTGTTAAGGGAGCTTAAGAGCATATTTGAACCTGTGATGGCCAAGATCAACAAT GGTTGGACTCATAAGGACAGTGATGAAGAGTATGGAAGCACTACTGGGCCGACCCAGTCCATTGCTACTTCGACCAGGCG CAAGTTGAAGAAGAAGCTTAGTTGGTTTAATAATTTTGCTTGA
Protein sequence (LotjaGi1g1v0616300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLSKMKEIAEAFLVSPVKNAVITVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAGLAYGLQNKSSFAGKRNVFVFD LGGGTFDVSILTIKDDSFEVKAIAGDTHLGGEDFDNRMVDHFVKEFKRKHKKDISACEKAKRTLSFTADTTIEVDALFEN TDLCSTITRIRFEELTIDLFKKCMEIVERCLEDSKMDKSDIDDVILVGGSSRIPKVQQLLQDFFNGKELCKGINPDEAVA YGAAVQAALLTDGATNVPNLVLMDVSPLSLGIFTRGDLMSIVVPRNTTIPIKKKQRYITPEDNQSRIWIEVYEGERTRAS VNNLLGSFILSGLPRAPRGYPFDVCFAIDENGTLTVSAEDEITGNKNEITITNCKGRLSSQQIKRLIKEADNYKAEDMKF KKKVEAVRAVDDYLYNMKKLMRDESVSSKLPPMVQVEINSAIVKGEKLLDGGQKKEAFVFVDLLRELKSIFEPVMAKINN GWTHKDSDEEYGSTTGPTQSIATSTRRKLKKKLSWFNNFA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 477 | 477 | 1.6E-158 | ||
| SUPERFAMILY | 1 | 65 | 65 | 2.78E-22 | ||
| PANTHER | 1 | 489 | 489 | 2.8E-214 | ||
| PANTHER | 1 | 489 | 489 | 2.8E-214 | – | |
| Gene3D | 1 | 73 | 73 | 4.9E-28 | – | |
| PRINTS | 21 | 41 | 21 | 1.9E-48 | – | |
| SUPERFAMILY | 73 | 250 | 178 | 8.19E-59 | ||
| ProSitePatterns | 78 | 91 | 14 | - | ||
| PRINTS | 84 | 94 | 11 | 1.9E-48 | – | |
| Gene3D | 110 | 182 | 73 | 2.2E-22 | – | |
| PRINTS | 201 | 217 | 17 | 1.9E-48 | – | |
| ProSitePatterns | 204 | 218 | 15 | - | ||
| PRINTS | 233 | 253 | 21 | 1.9E-48 | – | |
| Gene3D | 251 | 377 | 127 | 3.0E-44 | ||
| SUPERFAMILY | 255 | 409 | 155 | 2.88E-46 | ||
| PRINTS | 259 | 278 | 20 | 1.9E-48 | – | |
| PRINTS | 339 | 355 | 17 | 1.9E-48 | – | |
| Gene3D | 378 | 481 | 104 | 1.8E-19 | ||
| SUPERFAMILY | 379 | 477 | 99 | 1.96E-7 | ||
| Coils | 383 | 403 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0616300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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