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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0616600 |
| Transcript ID | LotjaGi1g1v0616600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Vacuolar-processing enzyme; TAIR: AT4G32940.1 gamma vacuolar processing enzyme; Swiss-Prot: sp|P49044|VPE_VICSA Vacuolar-processing enzyme; TrEMBL-Plants: tr|A0A151R8G0|A0A151R8G0_CAJCA Vacuolar-processing enzyme; Found in the gene: LotjaGi1g1v0616600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116325013..116328233) extracted from Lotus japonicus Gifu genome v1.2.
CATTAAGTAAAGAGAACTTCACACCTCACGTCCCATGAGCTACTATATATACATTGGACGCTGAATTATTTATGTACACT GACTGAGAGCTCTTGAAAAAGATCAATCACTATAAGTATTAGCATTCTTTCTTTCATAAATCACACCCAAAATAAAAAAT GAATCGCTGGATCAGCTTCTTGATTCCGCTGATAGCATTACTCTGGATGAGTATGGCAGTGACTGGTGATCACCAGTCAT CAACAGAGGGAAAGAGATGGGCTTTGCTGGTTGCTGGTTCTAATGAGTTCTACAACTACAGGCACCAAGCTGATATTTGC CATGCCTACCAGATTCTGAAGAAAGGTGGTCTTCCAGATGAAAACATCATTGTTTTCATGTATGATGACATTGCCTACAA TAAAGAAAACAAATGGCCTGGAAAAATATTTAACAGCCCAAATGGTCCAAATGTTTATGAAGGGGTTCCCAAGGTATATA TTTATTTTATTAGTATATGATATATATGATATATATTTACATATGTATGGTATAACCTAAGCAAGGAGCAATAAAATTTG TTTAGGATTATACTGGAGATGCAGTGAGTGTAGAAAACTTCTTTGCTGTGCTTAGTGGCAACAAAAGTGCTACCACTGGA GGTAGTGGGAAGGTTTTGGACAGTGGCCCAGACGACATCATTTTCATTTACTACACAGACCACGGCGATGCCGGCATAGT ATGTTAGTAACTCATTGCCTTGGGATTTTGTATTCACGTAAAAAACATCTAATTAAGTCTTTTGTTTATAACTTTATATA ACCCTTTATTCGATATTTCTAATACTTTTTTCCTCTATAATTATTTGATTAGCCATGCTAGATGATATGATTACAGCCAA CGACCTTGTAGATGCGTTGAAGAAGAAACATGCCGCAAATTCATATAAAAAGATGGTGAGTACGTAGATGTATTTTATTT ATGTTATAATTTATTATATTAATGTCAAGTTATTTTCTTCACTTTTCATTTTTAATAAATAATGATATTTCATGAAATTA ATTATATATATTTGAAGGTGATATACTTGGAAGCATGTGAATCTGGGAGCATGTTTGAAGGACTTCTTCCAGATGACATA AACATCTATGCAACCACTGCTGCAAATGCAGAGGAAAATAGTTGGGGATATTACTGCTTAATAAAAGAGTATGGCACTTG TCTGGGAGACCTCTACAGCATTTCATGGATGGAAGACAGGTATCTATCTATATATATATATAGTTCAATTAATTTAATCA TAATTACCTTACTCATCTTTGTTATCTATTTGTTTTTTTTTAAAGTATATGTGAGTTAAGTACTTGTAATATATAGGAAT TTAGAGATAATAATTATAAGTACTCAGAAATGTGGATCTGAGAGTATTTTAGTCAATTAACTAAATGAAATGCCTCTTTA TGATCGATAATATTAGTTGTCTTGATTGTGGAACAGTGACAAGCATGATCCGAGGTCAGAAACTCTGGAAAGACAATATG AACATGTACGCCAAAATTTAATTACTTACTTCATCGATCCTTGTATGTATGTATGTATAATATCTTGACTGAACATATAT AATGAAAATTGTGTATATATATAGGTTCGCAAGAGAACAATTAGTCCTCCAACAATGCATTCTCACGTAATGCAATATGG AGATATGAGGATGAGCAGTGATTATCTTGCCACATACATTGGTTCACCCAGTCATGAAGAAGTTTATCAAAACTTCAATC TCCCCACCAATAATGCAATTCCATTTAGTGATCCATCAGAACTTGTTAGCCAACGAGATGCACGCTTATTTTATCTAAGG CATAAGGTAAATTTAATTTCATGGTAATTCTATATCACTTTATGGGAAGATATTTTAATTAACTATTTAATTTGTTTCTT AATGTTGTTTCAGTTGGAAAAGGCAATGGATGGTTCTAATGAGAAGTTACAAGCTCAGAAAGAGTTAGATGCTGAAATGG CTCACAGGGAGCATGTGGATAAGAGTGTCCATCTCATAGGGAACCTCTTGTTTGGAGAAGACAAAAGCTCCAACACCATG GTTCATGTTCGTCCGGCAGGGCAGCCTCTTGTTGATGACTGGGAATGTTTTAAGACACTGGTAATTAAGCATAATTAACA AATCTAATTCTACTTTCAAAAAAAAAAACAAATCTAATTCTTAATTAACACCTGTCGGCTTGAAAGAAAACTTCAGCGGA CTCCAATGCAAATTCTAACTATGTTTGCTTTATATATTTTTCGCGCAGATAAAAACTTACAAGAAGCACTGCGGAGCTTT ATCAAGGTATGGAAGGAAATACACAAGGGCCTTTGCCAACATGTGCAATGCTGGAATTTCTGAGAAGCAATTGATTGCAG CATCATTGCAAGCTTGTCCTTGGAAAACCCAGGCTTCTTAGATTCCTCTTTAGGAGAAGAATGTAATAACGAATACATTA ATAAATTCCTCCTAAGGAGAAGAATGTGATATATTAATAAGTTCCTCCTCGGGAATGTAATAGCTAATATATTAATAACT CAACTGTTCTTCAATTCTGCAAAATTCATTATCCTCGTTCTTAGTAAATCTTAATATATATTGGCCAATTCAGAGGTAAA TTAAAGTATTGTATTCTTTTTTATGAGTAGTTATGATTTCTTAATTGAACATGCCTTGTAGAACAAATATGAGTCTGTAT AAACAAACATATACCAAATACCACAAAGACAGCAACTAGAAGAAAAGAACAACAATTAGATGCCAAAGCAGAACAAGTTT CCCCTTCAAAAAGAGCCACAAGAGAAAAGAAGATCCTCCTGATAACAACCTGCCAACAACCAATACTATTCATCAATGAA AAACTCCACTACCTCTTTAAGCATTAACATCACCTCTAAAAACCAACCTGGGCCTGTGGACTTAACTTGAGAAACGTAGA CCTGATGTACTAACCTTGGACTGCATGAAACTCACACAACCTAAACCAACTGAATCAGAAAACCTCCAACTGATAATCTT TCACAGATCATACTGATGAATTAAGATATCATGACCCAAACAAATTAACCAGCTACCAAAAGAAATAAAGAATTTAAATT GATAGCTGGTACGTTGAAGAATAGGTTCAAAACCCCAACCCTGTCTTCATCCTGAGACTGCAGGAAGACGTTTCTCAAAC ATGACAAGGATCGTTACGAAC
CDS sequence (LotjaGi1g1v0616600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCGCTGGATCAGCTTCTTGATTCCGCTGATAGCATTACTCTGGATGAGTATGGCAGTGACTGGTGATCACCAGTC ATCAACAGAGGGAAAGAGATGGGCTTTGCTGGTTGCTGGTTCTAATGAGTTCTACAACTACAGGCACCAAGCTGATATTT GCCATGCCTACCAGATTCTGAAGAAAGGTGGTCTTCCAGATGAAAACATCATTGTTTTCATGTATGATGACATTGCCTAC AATAAAGAAAACAAATGGCCTGGAAAAATATTTAACAGCCCAAATGGTCCAAATGTTTATGAAGGGGTTCCCAAGGATTA TACTGGAGATGCAGTGAGTGTAGAAAACTTCTTTGCTGTGCTTAGTGGCAACAAAAGTGCTACCACTGGAGGTAGTGGGA AGGTTTTGGACAGTGGCCCAGACGACATCATTTTCATTTACTACACAGACCACGGCGATGCCGGCATAGTATCCATGCTA GATGATATGATTACAGCCAACGACCTTGTAGATGCGTTGAAGAAGAAACATGCCGCAAATTCATATAAAAAGATGGTGAT ATACTTGGAAGCATGTGAATCTGGGAGCATGTTTGAAGGACTTCTTCCAGATGACATAAACATCTATGCAACCACTGCTG CAAATGCAGAGGAAAATAGTTGGGGATATTACTGCTTAATAAAAGAGTATGGCACTTGTCTGGGAGACCTCTACAGCATT TCATGGATGGAAGACAGTGACAAGCATGATCCGAGGTCAGAAACTCTGGAAAGACAATATGAACATGTTCGCAAGAGAAC AATTAGTCCTCCAACAATGCATTCTCACGTAATGCAATATGGAGATATGAGGATGAGCAGTGATTATCTTGCCACATACA TTGGTTCACCCAGTCATGAAGAAGTTTATCAAAACTTCAATCTCCCCACCAATAATGCAATTCCATTTAGTGATCCATCA GAACTTGTTAGCCAACGAGATGCACGCTTATTTTATCTAAGGCATAAGTTGGAAAAGGCAATGGATGGTTCTAATGAGAA GTTACAAGCTCAGAAAGAGTTAGATGCTGAAATGGCTCACAGGGAGCATGTGGATAAGAGTGTCCATCTCATAGGGAACC TCTTGTTTGGAGAAGACAAAAGCTCCAACACCATGGTTCATGTTCGTCCGGCAGGGCAGCCTCTTGTTGATGACTGGGAA TGTTTTAAGACACTGATAAAAACTTACAAGAAGCACTGCGGAGCTTTATCAAGGTATGGAAGGAAATACACAAGGGCCTT TGCCAACATGTGCAATGCTGGAATTTCTGAGAAGCAATTGATTGCAGCATCATTGCAAGCTTGTCCTTGGAAAACCCAGG CTTCTTAG
Protein sequence (LotjaGi1g1v0616600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNRWISFLIPLIALLWMSMAVTGDHQSSTEGKRWALLVAGSNEFYNYRHQADICHAYQILKKGGLPDENIIVFMYDDIAY NKENKWPGKIFNSPNGPNVYEGVPKDYTGDAVSVENFFAVLSGNKSATTGGSGKVLDSGPDDIIFIYYTDHGDAGIVSML DDMITANDLVDALKKKHAANSYKKMVIYLEACESGSMFEGLLPDDINIYATTAANAEENSWGYYCLIKEYGTCLGDLYSI SWMEDSDKHDPRSETLERQYEHVRKRTISPPTMHSHVMQYGDMRMSSDYLATYIGSPSHEEVYQNFNLPTNNAIPFSDPS ELVSQRDARLFYLRHKLEKAMDGSNEKLQAQKELDAEMAHREHVDKSVHLIGNLLFGEDKSSNTMVHVRPAGQPLVDDWE CFKTLIKTYKKHCGALSRYGRKYTRAFANMCNAGISEKQLIAASLQACPWKTQAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PIRSF | 4 | 455 | 452 | 1.3E-192 | ||
| Phobius | 4 | 15 | 12 | - | – | |
| PIRSF | 12 | 455 | 444 | 3.4E-195 | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 455 | 435 | - | – | |
| PANTHER | 24 | 448 | 425 | 8.7E-182 | ||
| PANTHER | 24 | 448 | 425 | 8.7E-182 | – | |
| Gene3D | 31 | 315 | 285 | 1.2E-127 | – | |
| Pfam | 33 | 295 | 263 | 7.4E-109 | ||
| PRINTS | 34 | 58 | 25 | 9.4E-53 | ||
| PRINTS | 59 | 88 | 30 | 9.4E-53 | ||
| PRINTS | 106 | 121 | 16 | 9.4E-53 | ||
| PRINTS | 134 | 153 | 20 | 9.4E-53 | ||
| PRINTS | 182 | 198 | 17 | 9.4E-53 | ||
| Gene3D | 325 | 450 | 126 | 2.0E-18 | – | |
| Coils | 334 | 354 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Peptidase activity | Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid. |
Expression pattern of LotjaGi1g1v0616600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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