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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0618700 |
| Transcript ID | LotjaGi1g1v0618700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UBX domain-containing protein; TAIR: AT3G27310.1 plant UBX domain-containing protein 1; Swiss-Prot: sp|Q9LK22|PUX1_ARATH Plant UBX domain-containing protein 1; TrEMBL-Plants: tr|I3SAZ3|I3SAZ3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0618700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116563027..116569009) extracted from Lotus japonicus Gifu genome v1.2.
CTGAGTTATTGTATTATATATAGAATAAAGTGCTAGTGTAACGGTGCAAAAGATTAATGAGATATTTGCTGAACTAGAAA AAGAAAAAGAAAAAGAAAACATCGTTTGATCCGAGATCGAAGAACAAGAGTGTTGTTGTTGTTGTGTTCCACTCTCTGAT GGTCGTAGGTGGTTCCTTCCCACTAGCTTCCAAGAGGAGAAGACTCACCAACACATATTCCTCAGCCATGGATTCTGAGG CGGCTAAGGTTTCTCTCTCACTTCACCTATTCCTCTTCTTTATTTGTTTGATTATCTATTCATCTTTTTTTCCGATCTGG GTTTGCCTCATTTTTGCTTTATCTGTTCATTATTTGATGATTGCTTTTCTGGGTCTGTTGCAAGTTTTCTTTTTTCTTTC TCTTGTGGGTTTTCAATACTGTGTCTGCAATTGATGGTGTAGACTGCAATTTTTTGAAGGCATGATTGTTATGCACTTAG GGTTGTAGAATGAAAAGAAAATATTCAAATTTTAATGATGGAAAACACAGGAACTAATCAACTCAGAGCCTGTTTGGTTT TCAGTTGGGCGAATGTGAAAACACATTCACTCAACCCAACAAGTGCATTATGTTGGCTGAATGTGCATTGGAAATCGTGA TCTCGAATTCCAATGCTTCAAGCGGAGTTCCTAACTGAAAACCAAACAGACACTCAATTGAGGGCATAATGTGCATTAAC AGATACACATATTTCCACACATAAATGAATTGCCATGGTGTGATCTTGTAAAGTTTAAAGCTTTATGGGTTAAAGAAGGT TGTTATTGACCTATAGTGTAATAATTTTTAATAGAGTATAAAAAGGGAAAGGGGACTCATTGTTAGAATCCAACTTGTGA TGTTGGGGATTAAAGGGAGAAGAGCGATTCTTTCGGAAAAAAAACCAGTGATTGTATGCTTTGTGTCCTCCACAGTTTGG GATCAGGAGTCTTCTTCAATGATACAGTTCTATTTTCTTTCTTTTGGTCCAGTTCTATACATCACTTGCGGTCTCCTTGA GTTGTCTTTCTTGTTCATCCTATTCTACTTGCAAATGGATTGTAAACAACTAATTTGTTTTTGCTGTTCTTGTCATATTT ATCATCGAAATGTTGGTTGCAACGGGTCAAACTTCTTTAGACCATCTACTTGTGTGCTTCATGATGTGTGCAAACTGGAA AATGTTAGTTGCGTTGCCTTTCACTACCGAGCTTCATCAAGTTCGATCTTCAATATTCAATAAATCAATCCACAACCGTT CTAGATTCTGCCTGTTTTGTCTTAGAAATATTTTAAAATATTGAAGAGGCTTGTCAGCCAATTACACTATGCATTTTTAA CATTCTTTGATGTTCAATGCAACACTGGCAAGAATACCACTTGATAGGGTTTGCTATGTGGATCTTTCAAAGCCACTGGG CTCTATCAAATACCAAAGTTTCAGTAAAACCTTTGAGATCAAGACATTCTTTAGAGGGCATAGTATTTTCTTTATTCCTG CTCTACCCCTTTAAATATTATCTTCTATTTGATCAACTTTTCTGAGTTTCTCAAGGTTATTCCTCCACACATTTTAAACC TATGTCTGACATTCTCATCAATCTTCCCATCACTTTGTAATACCGTTACGCGATATCTAAGCTGTTGAACTTGCGGTGTG ATGTGATCTCGTGCATTCACCTCCAAAACATTGCTGACTCTTATCTTACTGAATTTGCAGTCCATATATTTTATCTTACT CCTACATAACCCAAAATTATTTGATGCCAAAGCCTCTCCCCACAACTAACTTCAGCATTTACTCCTTTTCTTGATTAATC AGCTATAAGCTATATATCATTCACTTTTTGATTCATGTTAATTAGTGCCCTTTTTAAATGATGTCTTTAAGTTGTATTCT GTACTCAGTTTTTCTCTGTAGATAGCCTCCCTCGTAAATTTGTTAGTGGTAGAAATAGCTGGTGATTTCTAGCTTTCCTC TTGAATGCAGACCTTGTTTATTGTTTATATTAATTCACTTTATTAAATTGAAATAATGATGAGAAAGTTCTTCTTCCTGT CCTCTAAATTATTGTTATGATGTCTTTGATCTTCCATGAGGTATTATGGATATTGATCCATTGTAAATTAGTTATTTAAA TTTTATATTTAAGCCAGCTTTTCGCCATTCCAGTTTCTTCCCTTTTACCGTGATGAACTATTTATCTTAGTGATGTTTCT TTTGCCATTATTTTTTATGGAGCCAGGCCAAGCTTGCAGCTATGACAGAAAGATATGGACGAGAGTTCCATGTTTTTGAA ACATCAACTTTTTCTCCATCTTCAAATGCTGCATCATCTAACGGTAATAGCACTTTATCCTTGACAATCTCAAGGCCCTA GGAAAGTTTGCGTTTCAAATTTGAGAAGTGCAACCAACACTCACTTTGGCTCTCTCTTTCCAACACTCTCTTTTATTGGT TGAAATACATGTAGGTCCTACCAAGTTAGATGGGCTTCACACCCAATTGGGTGGGACCTACATGAATTTCAACCAATTAT AGAGTGTTAGAAAGAGTGTCAAAATGAAAGTTGGTAGAATTTTTCTTAAAATTTCAATTATTGATATTGGTATATTTAAT TTTCCTTTAGCATCCCAATTAAATGTGGAAGAAGAGGAGACGGATGACTTAGAGTTTTCCCCAGAAGATTATATCCGGAT TTCATCCATTAAAAAGCCAGGTAATGATGATATTAATCATTTCATTTGAGGGGTATACCAAAATTTCAAATTCAAACAAT GACTTGAATAAAATAACAATGAATGTATTCATATAGATTTGCATTGCTTAACACTTTCTTCAATTTACACTCTGAATGTC TTTTCACTAATGTAATGGAAATTTATACTCTGATACATGTTGTTAGACTGGTACAGAAAATAGGAAAAGAATAGTGATTT TATTCAGACAACCTAGATTAGATCTCCCTATTCTGGTATAGAACAAGAAAATGATACCCAGTGGCAATTCGGGAGGTTCT CTAATTCTCCTAACTTCTCACTTCTAACAGAATAACTGCTTACTTTCCACATAACTCCTATTCTCTCTTATACTAACTAC TAGCTGCCGCTTTGCCTTGTTGAGTCTGTTACATGGGTTGTTCCATCTACCCCTGGCCCAATTCCCTTACTTCTCCTAGT ATAAACTCTATTATTTACAGGTCTACTAACAGAGGAAAAGGAAGGAATGGAACAAAGTTACCATTGTCCTTGTTTAGGAG ATTAGTAAAGTAACAAAACGGAATTCAATTATCCTTGAGTTTCCATTTGTTTGCCAGTGTTCTTAAGGTTAGAAATAGTA CATTTCACCGTATAGTATATACGGTTTATATTTGCGAAGGACTACCCTACTAAACATGTTATTTTCTCTCACTTTTTGGT TTTCTTACATATTCATTGTTTTTGTTTGCTGTTGATGGGTGCTAATACTCATTGAAAGAGGGATATTAAATAGATTTAAG TGCAGTACATTTTAAGGATGCATAAACTAAATATTCTCTTCATGACATTGAATGTATTAAATATTTTCAGAACCCATCTT GAAGACTCGAAAAATGCGAGAAGCAGAAGCGGCGGCTCGCAAGTCGAAAATGACCAGAGTAATGTCTAGCTTCTTCTTGA TATTATTGTTTTCAAAATTTTATAATGATTTCTCAAGCTCTTGTGATATCCCATATTGGTTATCATTTTTTGACAGTTCA TAATGATTAATGAATGGTTAAATCAGATCAGTCGATAATGAAGTTATCTTTTAAATTGGTTGGTCTTGTTTGCAGGCTGT AATTAGAGTTCGCTTCCCTGATAATCACACATTGGAGGCTACCTTCGACCCATCGGAAACAATCCAGACTTTAATTGATC TCCTCATTAAAGTGATTGCACAGCCAGAGCAGCCATTTTATATATGTAGGCATATTAATACTCCGTATATGATCAAATTT TTTGAATTATATTTGCCTGCAGTGCTTTGAATTTTGTACTGACCTGTATAACACGATTCAAGGCTCACATATCATCAGTT TACCATAGCCCATGAAGAATTATCTCTTGATAAGGATTATAAAGTGCTATTCTCTAGAAAGTTGATTTGGATCTTATCTG AATATATAAAATCATATGTAATTATGTATACTTTTAATGATGCAGATACTGTTCCACCTAAGAAGCTGATCACTAACATG TCTCAGGATTTTTATGCTGCTGGCTTTTGTCCCGGTGCCCTTGTTAACTTTTCCTATGATGTTTCAAAAGGTGAGCTCAT CCTATCTGAAGATTTTTTTTTGGGCAGAAATGCATTACTTGATTGTCCTTTTGCTCTATTATTAGTATTGAGTAAACTCC TAAATTGGTCCTCGATCAATTATTGTCTTATTAGTCCTTCAAAAATTTGTCACCAAATTAGTCTCGTAAATATCTAAATT TCTCCATATTTGTCAACAAAGTCGAGTTGAATACCTCACTAAAAGGATGGTTGTGGAAAGTTACTTTTGTTTGTGAACTA TTTGGGTCTTTTATTCTTTTAGTTTAAGATTTGAATGTGTAAATGTCAATACTTGTCGTTGCAAGGATTTAAGATGTTAG TTTTTGCAACACCCACCAAAACTTTTCTATATTAAGTGGGGTTGACTCCATGATCGAACAATGCCTCAATGTTCTGTCCT GAATCCAAAGATAGACCCTTTCATTTAAGTTTCTCTTAATTCGTGTATATTATTTTAGTTCCTTGTAAGTTTGTTTGATT TTCTAAATTTCTAATTAAAAATTGAAGATTGCAGATGCATGACCAGTGCCAAAGGGAATATATCAACACATTGGCAGTTT GGCACTGGTCGTGCATCTATGTTAGCTATAATCTGTAAAATCTGTTTCCAAATCCATTATAACATACTACTTCATCAAGC AGATGCAGTTATATTTGTTGCATATTTGGAGATCTGAGTAGCATAAATGGCCCTAGCTTCTCTTATTTTTTTTTAAACAA ACCATTAATGTGTATTTCTAGTACATGTACTTACACTAGAGGATTGTAAAGTCCACTTCAGTGTTGTCAATGGCGGAGAG CAATAAAAGGCCATATTTGACAAACACTCATGGTGGGTGGAGGATTATCGGCCATGGCGGCTTGCTTGAATTCCGCCATG ACTGGTCACCTTGTTTGGGATTTGTTGATGACCATATCTCTGATATATTTTCCTTTCTTGTTTAATGGGATGTTTAGGTG GTTCCGCTGTTGACCTTAACAGTCCTTACCTACGCGAAGAGATCTTATCTTTGAAGGGTTCAGATGCTGCTAATGATCAA GGCCAGCAATCTGAGCTTGTACAATCTGAACCAGAGCCTGTGGAGCCAACAAAGCCACCCACTCCTGTGCAGGAACAAAA ACCTGCTCAGAAAAAGCTTGTTAAACCAAAATGGCTAAAGATGTGATGTGATATCACTTTCTTAGGGATTCAGTGATCAT TGTTGCAAAGGAGCTTCACTTTTGCTCTATGTATACTTAAAATGGGTCACTTGGTTACCCTTGTGGCTAAATTAGTGTTA CATCTTGATTCAAATGTATAATACCAAGTTCAAAGGAATGCATTGTCTATTTTTCCCTTTTGTTTCTCCTTTATTTTCAT GAATTTGTATATATAATGTTTGAAAACGTTGGATAGTTTTCTTTTGGTAATGTATGGATGGATGTGTTATTTCCATAGTT ATGTGTAGTACAAAGTTTTTTTTAATCCAGGCTTTAGAATGCAAGCCTCTCGACTGTTCTTTGCTTACCAGTATTACTGT AAGGTTATTTGACCAATTCTGGTTACATTTACAAATGATTTGTACAAATGAGAGTTTTTAGACCAATTTCTTGGGATTTT TTGTAAACGAGCTGAGTATTAGCATGTTTGGATCATTTTTTTTTTCTCATAATCAATTATGAC
CDS sequence (LotjaGi1g1v0618700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCGTAGGTGGTTCCTTCCCACTAGCTTCCAAGAGGAGAAGACTCACCAACACATATTCCTCAGCCATGGATTCTGA GGCGGCTAAGGCCAAGCTTGCAGCTATGACAGAAAGATATGGACGAGAGTTCCATGTTTTTGAAACATCAACTTTTTCTC CATCTTCAAATGCTGCATCATCTAACGCATCCCAATTAAATGTGGAAGAAGAGGAGACGGATGACTTAGAGTTTTCCCCA GAAGATTATATCCGGATTTCATCCATTAAAAAGCCAGAACCCATCTTGAAGACTCGAAAAATGCGAGAAGCAGAAGCGGC GGCTCGCAAGTCGAAAATGACCAGAGCTGTAATTAGAGTTCGCTTCCCTGATAATCACACATTGGAGGCTACCTTCGACC CATCGGAAACAATCCAGACTTTAATTGATCTCCTCATTAAAGTGATTGCACAGCCAGAGCAGCCATTTTATATATATACT GTTCCACCTAAGAAGCTGATCACTAACATGTCTCAGGATTTTTATGCTGCTGGCTTTTGTCCCGGTGCCCTTGTTAACTT TTCCTATGATGTTTCAAAAGGTGGTTCCGCTGTTGACCTTAACAGTCCTTACCTACGCGAAGAGATCTTATCTTTGAAGG GTTCAGATGCTGCTAATGATCAAGGCCAGCAATCTGAGCTTGTACAATCTGAACCAGAGCCTGTGGAGCCAACAAAGCCA CCCACTCCTGTGCAGGAACAAAAACCTGCTCAGAAAAAGCTTGTTAAACCAAAATGGCTAAAGATGTGA
Protein sequence (LotjaGi1g1v0618700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVGGSFPLASKRRRLTNTYSSAMDSEAAKAKLAAMTERYGREFHVFETSTFSPSSNAASSNASQLNVEEEETDDLEFSP EDYIRISSIKKPEPILKTRKMREAEAAARKSKMTRAVIRVRFPDNHTLEATFDPSETIQTLIDLLIKVIAQPEQPFYIYT VPPKKLITNMSQDFYAAGFCPGALVNFSYDVSKGGSAVDLNSPYLREEILSLKGSDAANDQGQQSELVQSEPEPVEPTKP PTPVQEQKPAQKKLVKPKWLKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 262 | 262 | 3.2E-95 | – | |
| SUPERFAMILY | 90 | 187 | 98 | 5.89E-17 | ||
| Gene3D | 106 | 187 | 82 | 3.6E-10 | – | |
| ProSiteProfiles | 111 | 187 | 77 | 11.96 | ||
| Pfam | 114 | 171 | 58 | 4.5E-5 | ||
| CDD | 116 | 189 | 74 | 7.29005E-27 | – | |
| MobiDBLite | 215 | 262 | 48 | - | – | |
| MobiDBLite | 216 | 231 | 16 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0618700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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