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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0619300 |
| Transcript ID | LotjaGi1g1v0619300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|I1N7L1|I1N7L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0619300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116628280..116635470) extracted from Lotus japonicus Gifu genome v1.2.
GTTGCTTGTTAATGATACTCCTTATTTTTAAAATTATTTGAACCACAATTTGTGGCAACATAATTCCTCACCTTGCCTCT TAACAATAAGTTCATGGTATATTCATCGACTATGAGAATGAAGTACGTACATTTTGTAATTAGTCGTTTATCTTTTATTA CAAACATTTACAACGAGAAAATCAATCACAACTATCATACATTCAAGTTTAAAGAAAATATTAGAGGTGTTATATTCTAA ATATATTCAAACAAATCATATTTTGTCCACATAAAAGTGGGGAGTTGTGAGAGTGATTAAAACATTAAAGACTAAATTCA ATGTGAAAATAGAAAAGTTATTAAAAAATTGATAGTATCCGTGTAGCTTTGGAGGGTTGTTTTAGTCAGGAAAAAGTGTG GAAACTTGTATATATATAGGAGTATTCTCTTCTCCGGCTCTTCAACGCCTCTAGCATCTTCCCCCTTTCTCTCTCTTCAT GTGATACACCACTTGTTGAGTATTGGTGATACTTATTATACTAGCTGCTAGCAAGGTAAACTTTTCCCCTTCAAACAGAG AAACAGAGGAAGAGAAGCCTATTTTTCATACCAATCCTGCAACATCTTTCTTAACTCATCATGGGAACTCAGGCAGATAC AGATGTAAGTTTCCCCTCTCTCTTTCTCTCTGCATAACAAATTGTTTGTTTATTTGCATTTACCATGTTTATACACAGCG TTTATGTATTTGAATGGAAGAAATACGTATTCCTCTGCGTATTTCATGAGAAATCTTCATCATGGTTTTGTTGCAAACCT TTGTGATTAATTGCTGCTGCAATGTTAACTTGCGATTGCAATTGCTAGTTGACGCATTTCTCAGCATTTTCTTTAAAACT AAGTATATACTAATTAACCATTGTAATTTAAAGCCTTGATTTTATAATTAGCCATAAGTCCATAACCCTTTTTTTTTGCG TTGCTCCGGTACCATTAGAATCCTTCAGTTGATTATTTAGACTAGTTGAAATGATTAAATTGCAAATTATACGAGTTTGT TATACAAGAAATCATGATAAATTAAGTTCCTCTACTTTTAGATAGAGAAATTGTTTTTTTTTAATTAGCTCAGTTAGTTA ATGGTTGCTTGGTTAACCTCTGTAAGTTATACTGTAACCAAACACACCACAAGAGAGTCTTTGAGACACCCGTGATAGGC GATAAATAGAAAGTTACTTTAATTAGTTCACCTTTGTTTTTTTTCTAGCTCTAAGTAAACAATACTCTTTAACCAATGGT ATGTGCTGGCTCTTAGTATTAACTGTTTGATCAAATACTGTATCTATATTCAGATTCCAATGGGTTCCTAACACGTAACG AAATAATAATAATATCGTTGACATTTAATTGGACTACTTAGTTTGGTTCCACATGGGTTCATGTATGTACATAAGCATAT ACTAGTAAACGCTAGCTGTTGATGAATGACAAAGAAATTAAAGACTTTTTTATTTGTGTTGAGAATGAGAAGGCGGAAAT TTCCACACGGAGACGTCAACGTAACGTGTTTATGTATTCTAACTTAGTTTATGGTTTTTATTTCATTTGAACATATTTTT CTAATAAAATCTTTGGTATTGAGTGAATTGTCCCTGGGTTTTCAACATTAAAAACTAGTGAATTTTTTCACATAACATTT GTTCAATTATAATAAAAATATGTGAACGATATTCGTCAAAATTTTCAAATTATTTTAACATTTCTTAAATAATAATCAGA CTAAAATATAATATATTGTCATTGTAATGTAAAGTGTCGTGTTTTTAACTTTTTTTTGGTAGTTGTTTTTTTAATATTTA TTAGTCAAATTTAATTTCACATGTCTCCTGTGATACGTAATAGAATTGATGGGAACTAGCCAACTAGAAGTATAGACACA GATAATTCTCTCATGCTTTATTTATTTTGATGTGGATATAAGCGCGTTCTCACTTCTCATGACCGTAGATGCATTGGCCC TACATATTATTTTTTGGATGGCATTATTTTAGTACATATAGTTAAAATTTAAACTCTAAAAAGAAAAATAGCATAAGTCA AAGTCATGCGATGCAGAAAAGTTGGCATAAGATAAAGACAAGCACTTTTAGAATGCTATAATAGTCAAGTTGATTCTACA CTTTCCAAGAAGCTTGGGATTTGTGAGTGTTCCACAATTCACTGGCCACACCTTTTGCTCACACAACTTTTCAATTTCAA CCCCTTTAGGATGCCTAAAGTAAAGTAAAGTAAAGTAAACTGTTCAATCTGTATCTTGGTCTTGGATGGCCCATTAAAAG TAATCCCTTACTAATTAGATTCCAAACTAAGCCTTTTCGTTTGTGTATAATCACATGTTTGGGAGCTATAGATTTAATTT TCATTGCCTGAAATCACTTTTATCTAGTCATATAGATATTTGTCAATCAATTTAGAGAATTGATTTTAGTCTCAATTTTG GAAAATAATATACATGTTTGATGTTTAATATTCATTCGAGAGAATTAACTTTAGTCTCAAAATTAATTATCGTCGAAGCT ATAATGAGTAACTTTTACGTTAAGCATAATCAATTATGAGATTTTACAACTATGAAATTACCTTACAAGAACAATTTTTA CCATAATCAAACTCTATCAAAGTCAATTCTCACATTGCTAATCCAAACACTTTTTTGGTCGAACAGATGGATGAAAAACT AGCGCAACAGAAAGCAATTGATGACTGGCTTCCAATTACTTCTTCAAGGAATGCCAAATGGTGGTACTCAGCATTCCACA ATGTCACTGCCATGGTTGGAGCTGGTGTTCTTAGTCTCCCTTATGCTATGTCTGAACTTGGATGGTACATCTTTCAAACC CAACTTCCATTTTTTCACCTTGCTCATTTAAACATTTTTCAAACACATTTCAATCACATAATCACACATATAATTGAAAA AAAAAATTAACTGCATATGAATGAATTAGTAAATTACTTTTTCCAATTGTACCATTATAGGTTCATATTTAGTGATTTGG GTACAGTAGTATATTTTTTTTTCTGAGTAGCATTGAGCTCGTGTGGATACGAATCAAATAGCACTTATTAGAGTTTCTCT GCTAAAAATAAGTGCCCTTTGCTTAGCATTCAAACCGGCTCAATGTCTCATAGGGTAAAAATATTGAGAAAATTTTCATA TATTTGTTGATTTTGTGGATTACAATGATTTCTTCAGGGGACCTGGTGTGACTGTACTGATCCTCTCATGGATCATCACC TTGTACACGCTGTGGCAAATGGTTGAGATGCATGAAATGGTTCCTGGAAAACGATTTGACAGATACCATGAACTGGGTCA GCATGCCTTTGGTGAAAAGCTTGGTCTTTACATTGTGGTGCCTCAACAACTTATAGTTGAAATTGGGGTGAACATTGTGT ACATGGTCACTGGGGGGAGATCATTGCAGAAGTTCCATGATACAGTGTGTCCTGACTGCAAAAAGATCAAATTGACCTTT TTCATCATGATTTTTGCCTCTGTTCACTTTGTATTGTCTCACCTCCCCAACTTCAACTCCATTTCTGGTGTATCTTTGGC TGCAGCAGTCATGTCCTTAAGGTACAAGAGTAATGATATATACACACCTCCTTATTTATACACTTCATTTCCACCTATTT TTATTTCTATCTCTCTCCTCTTATCATCTATCACATCTTATACTTTCTCTCTCTTACTTTTTTTTTCTTCCTATCTCTCT CCTCCTCCACCTCTTTCCACCTCAATTTAGAGGTGTGCACAAATAATTATTGGTCAATTGTCAGTCAAGTTAGGCTCTTC GTCTCTTCAAAAGTCCCTTAACGTTGGTTGAGGGTGTCGAAGGAGGGACCAAAAGTGATAGAGGGACCAACTTGATTGAC AATTTTACTGGCGCTCTGTCTATCAGGGTCGAATTTGCGGATTCAATCATGAGAAAATAAGGAGATATAACCTCACCAAA ATAACTTTGATATTTACTTTGTGTTATAGCTATTCTACAATTGCTTGGGGAGCTTCTGCTCATAAGGGTGTTGTAGAAGA TGTGCAATATGGTTACAAAGCTAAGAGTACAGCAGGTACAGTTTTCAACTTCTTTAGTGCCCTTGGGGATGTGGCTTTTG CCTATGCTGGACACAATGTGGTGCTGGAAATCCAAGCAACAATTCCATCTACACCAGAGAAGCCATCCAAGGGTCCTATG TGGAGAGGAGTGGTGGTCGCCTACATAGTCGTGGCTCTGTGCTACTTCCCGGTTGCTCTAGTCGGTTACTGGATGTTCGG GAACACGGTTGACGACAACATCCTCGTCACCCTAGAGAAGCCAAGATGGCTAATTGCCATGGCTAACATGTTTGTTGTTG TCCATGTTATTGGAAGTTATCAGGTGAAACTTATTTCTGTGATTCACAACCTTTTTCATTTCAAAATGACCCTTCTTTTC AGTTCAAAACTAATGTCACAAAGATTAACTCGACTTTGTTGATGCAGATCTATGCAATGCCAGTGTTTGACATGATTGAA ACTGTGATGGTGAAGAAGTTGCACTTCAAACCTACCAGAATACTTCGTTTCATTGTGCGCAATTTGTATGTTGGTAAGTA AACTCTTCCTAATTGAAATGAAGTGACAAGTTGTTATATTACTTCCTATGGATTTTTTTTGGTCTGTTTCTGTTGCTTTG TAAATTGATAAACCATTCTTTGTTTTTAGCATTCACAATGTTCCTTGCTATAACCTTCCCCTTTTTCGGCGGTCTCCTTG GATTTTTCGGAGGATTTGCTTTTGCTCCAACAACATATTTTGTAAGTCAAGATAAGAGTGAATTTTAGTCCATTGGATTG AGAGTGTACTTAGTAGGATAAAGCTTTTTATCTTGGATGCTGATTCTCTTGCTTAAATTTTCAGCTTCCCTGTGTCATGT GGCTTGCTATCAAAAAACCAAGGAAATACAGCTTGTCATGGTGCACTAACTGGGTATGTTTGATCTTTGGTTATTTTGTT TCAATTATTATCCTTGAAATGGTTTCTTTCATTTTGAGCTATTTTTATTTAATCTTGCTCCATTGATTACAGATCTGCAT TGTGCTTGGCCTGTGTTTGATGATTCTATCACCTATTGGAGGATTGAGGACAATCATAATTAAAGCCAAGAAGTACGAGT TCTACTCTTAAACTCATTCCCCACTGAACCAATGATGCGAAGGTGTAGCAAGCAAGTTACTCAATGATATTTACTTAATA GATTAGATGAGGAGCTTCCACACACCCTGCATTTAGGTGGAAAAGAAAATTATGGCTACAAAACAAGTTAAAGAGAATTT TATAGATGTCATCTTTGTCATTTTTATATTACTCTGAATGTATATTGGTTTTCTCTTTGTTTGGCTTTGCTATATTATTT TTTTTTCCAACACTCGAGTTCATACTTGAACACCTTTAGTAATGGTTTACCGTCTAATGGTTTTTCAGTCAATATTTTTG GTACTAAATAAAATCAATCACAATTCCGTCGACCTAATACTCCTATGAATGAAGGAAGAATCAATGAACAAAAAGGATCA TGTTCCCCTGAATATCCCTAGTAATCTTGTGCACATTATAATCCAAGAAACAATTTCCTATCAATCAGGGGACAAGAGAA GAAGGTTTTATGTTTTGCAAATGAAATCTCTTACAGTGAGGAACAATAGGCCAATCTCTGAAGTTGTAGTTGAAGTACTG TTAGAAAGCCTTAGAGGGTGACCCAACTTTCTTAATTATGGGAAAGTTGCTGATGTCTTCAGACTCAGATGATTGAATGA TCATCCTATCTTATGCTATTATCTCGTATGAGCTTCTTTGCATGACATCATTTTGATTTTGGTTAAGGGTCTCACTACTA TAGTGGGTCTTTGACAAAGGACTATTATTCTATCTTCTAATCCTTCACAAAATAAGAACCCCTTTGTCTTTCTGCATTTT GGTACACTTCCCTTTTCTTTGTGTATTCCTCTTCCACTTTTCCTTTTTTCAGGAGGACACAGACACTAGTCATATAGGGC TTCCTTCTTTTTCCATTTGTTTTCTTCCCTTGTTTCATCCTCTAGCCTAATTTCAGTGATGAATTTCTGTTTTAAGAATT CCTTAAATACAGATTTTCTTGGAGTTTCCAAGTATCTTGTGGGAATTTTCTAGTCACTGGACAAGTACATGACCTACAAT AATGGTAGGGTAATTAAGCCATCTCAAGCTAATCCTAGGTGCCAATCTGGTAGCTTCATTGTAGTGGGAAATTAGGATCA TTAAACTGAGGAGGTGGAGATGGAGGAGGTGCAAACTGTTGTGATTGCACAAATATGGGTGAATGAGAACATGATAGCTG AGATTGTTGAGGAGATAGAGGTTGATAAGATTGCAACAATTAAGGATGTTGATGTGATGAGGAGGCACGAAAATTGCATC ATGAAAAATGTACTAACTGTTAATTTTCATTCTGATATGTGGTGGGATTTTTTTTTTTTTGAAAGTGATACGTGGTGGGA ATGTGGGATGATCCCCTGTCACGATGTAGTGAATACAATTTTTGCAGACTCTGTATTTTCATCTTATTGAATTCAGTATT TCCCTCATTTCAAACAAAAAAAAATCAGCAGGTGTTTGAGGAGAGGGCTTTCTCTTGCGACATGGTTCTCAGGCGGGCGT TTCAGCTTTCTCCGGTGCAATCCCCAGCGGTGGCAATGACAGGTCCGCCTTCTAATCAGCATGCGAGATGGACTCGGCCT GGTCATGGTCTTACAAGGATCAATTTTGATGGTGCTTTCAAAGAGGTATGGTGGCGAGGAACAGCGATGGGCTGGTTATG GCGTCAGCGACTACTTTTTCTTTGGCTACCTCTTCGGCGGTAGCTCTTTGTTAGGCTATGGTTCTAGCTTCACAACTTGG GTTTCATCGGGTTTGTTTTAAGACGAATTGTCTCCGGTTATTTCAGGTGGAAGAAGTCACCAGATGGTTCTTATTTAGTT TCGGTTTTTAGAGCGTGTCTTTCTTTATGTAATACTTTTGATGTTATTTTTTTTGTTTTTATTCGTCGTGATGACAATGT GGTTGCTGATTTTATAGCTAAGAACGCCTCTTTCGCCAAATTGGTTTGGATCGAGGTGTCTTCTCAAGTCG
CDS sequence (LotjaGi1g1v0619300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAACTCAGGCAGATACAGATATGGATGAAAAACTAGCGCAACAGAAAGCAATTGATGACTGGCTTCCAATTACTTC TTCAAGGAATGCCAAATGGTGGTACTCAGCATTCCACAATGTCACTGCCATGGTTGGAGCTGGTGTTCTTAGTCTCCCTT ATGCTATGTCTGAACTTGGATGGGGACCTGGTGTGACTGTACTGATCCTCTCATGGATCATCACCTTGTACACGCTGTGG CAAATGGTTGAGATGCATGAAATGGTTCCTGGAAAACGATTTGACAGATACCATGAACTGGGTCAGCATGCCTTTGGTGA AAAGCTTGGTCTTTACATTGTGGTGCCTCAACAACTTATAGTTGAAATTGGGGTGAACATTGTGTACATGGTCACTGGGG GGAGATCATTGCAGAAGTTCCATGATACAGTGTGTCCTGACTGCAAAAAGATCAAATTGACCTTTTTCATCATGATTTTT GCCTCTGTTCACTTTGTATTGTCTCACCTCCCCAACTTCAACTCCATTTCTGGTGTATCTTTGGCTGCAGCAGTCATGTC CTTAAGCTATTCTACAATTGCTTGGGGAGCTTCTGCTCATAAGGGTGTTGTAGAAGATGTGCAATATGGTTACAAAGCTA AGAGTACAGCAGGTACAGTTTTCAACTTCTTTAGTGCCCTTGGGGATGTGGCTTTTGCCTATGCTGGACACAATGTGGTG CTGGAAATCCAAGCAACAATTCCATCTACACCAGAGAAGCCATCCAAGGGTCCTATGTGGAGAGGAGTGGTGGTCGCCTA CATAGTCGTGGCTCTGTGCTACTTCCCGGTTGCTCTAGTCGGTTACTGGATGTTCGGGAACACGGTTGACGACAACATCC TCGTCACCCTAGAGAAGCCAAGATGGCTAATTGCCATGGCTAACATGTTTGTTGTTGTCCATGTTATTGGAAGTTATCAG ATCTATGCAATGCCAGTGTTTGACATGATTGAAACTGTGATGGTGAAGAAGTTGCACTTCAAACCTACCAGAATACTTCG TTTCATTGTGCGCAATTTGTATGTTGCATTCACAATGTTCCTTGCTATAACCTTCCCCTTTTTCGGCGGTCTCCTTGGAT TTTTCGGAGGATTTGCTTTTGCTCCAACAACATATTTTCTTCCCTGTGTCATGTGGCTTGCTATCAAAAAACCAAGGAAA TACAGCTTGTCATGGTGCACTAACTGGATCTGCATTGTGCTTGGCCTGTGTTTGATGATTCTATCACCTATTGGAGGATT GAGGACAATCATAATTAAAGCCAAGAAGTACGAGTTCTACTCTTAA
Protein sequence (LotjaGi1g1v0619300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTQADTDMDEKLAQQKAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAMSELGWGPGVTVLILSWIITLYTLW QMVEMHEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLIVEIGVNIVYMVTGGRSLQKFHDTVCPDCKKIKLTFFIMIF ASVHFVLSHLPNFNSISGVSLAAAVMSLSYSTIAWGASAHKGVVEDVQYGYKAKSTAGTVFNFFSALGDVAFAYAGHNVV LEIQATIPSTPEKPSKGPMWRGVVVAYIVVALCYFPVALVGYWMFGNTVDDNILVTLEKPRWLIAMANMFVVVHVIGSYQ IYAMPVFDMIETVMVKKLHFKPTRILRFIVRNLYVAFTMFLAITFPFFGGLLGFFGGFAFAPTTYFLPCVMWLAIKKPRK YSLSWCTNWICIVLGLCLMILSPIGGLRTIIIKAKKYEFYS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 8 | 437 | 430 | 9.8E-241 | – | |
| PANTHER | 8 | 437 | 430 | 9.8E-241 | – | |
| Pfam | 30 | 425 | 396 | 7.5E-110 | ||
| Phobius | 33 | 52 | 20 | - | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 53 | 58 | 6 | - | – | |
| Phobius | 59 | 80 | 22 | - | – | |
| TMHMM | 61 | 83 | 23 | - | – | |
| Phobius | 81 | 108 | 28 | - | – | |
| Phobius | 109 | 132 | 24 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| Phobius | 133 | 152 | 20 | - | – | |
| Phobius | 153 | 170 | 18 | - | – | |
| TMHMM | 153 | 170 | 18 | - | – | |
| Phobius | 171 | 175 | 5 | - | – | |
| Phobius | 176 | 197 | 22 | - | – | |
| TMHMM | 177 | 199 | 23 | - | – | |
| Phobius | 198 | 262 | 65 | - | – | |
| TMHMM | 219 | 241 | 23 | - | – | |
| TMHMM | 263 | 285 | 23 | - | – | |
| Phobius | 263 | 285 | 23 | - | – | |
| Phobius | 286 | 304 | 19 | - | – | |
| TMHMM | 305 | 327 | 23 | - | – | |
| Phobius | 305 | 327 | 23 | - | – | |
| Phobius | 328 | 347 | 20 | - | – | |
| TMHMM | 348 | 370 | 23 | - | – | |
| Phobius | 348 | 368 | 21 | - | – | |
| Phobius | 369 | 373 | 5 | - | – | |
| TMHMM | 374 | 396 | 23 | - | – | |
| Phobius | 374 | 395 | 22 | - | – | |
| Phobius | 396 | 406 | 11 | - | – | |
| Phobius | 407 | 431 | 25 | - | – | |
| TMHMM | 409 | 431 | 23 | - | – | |
| Phobius | 432 | 441 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0619300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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