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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0619400 |
| Transcript ID | LotjaGi1g1v0619400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid transporter, putative; TAIR: AT5G40780.1 lysine histidine transporter 1; Swiss-Prot: sp|Q9FKS8|LHT1_ARATH Lysine histidine transporter 1; TrEMBL-Plants: tr|H6BBU3|H6BBU3_LOTJA LHT-type plant amino acid transporter 1.2; Found in the gene: LotjaGi1g1v0619400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116636649..116641560) extracted from Lotus japonicus Gifu genome v1.2.
ACTAAGGATGAGTTTCCCACAAATCAAGAGCCAATTGCTTCGCGAGACGGCGGTGAAAAGTCCGCTTTTTCAACAACCGC CGACGCAAAGGTAGGCTAATTGTAACATGTTTTGTTTCTTTTCTTTAAAATTAATTCTGTTATTCAGACGCTAGACGCTA CTTTCGTAAGAACTAATTTTATCTTTAGGATCAATGATACCAGAATTTGGTTAAGAGATGTTTTGTTTTCTTTTTTCCAA TGAATTATAGCAGGTAGATGAAAGGACAGCTGAGCAGAAAGCAATTGATGATTGGCTTCCAATCACTTCATCAAGGAATG CAAAATGGTGGTACTCTGCTTTTCACAATGTAACTGCCATGGTTGGAGCTGGTGTGTTGAGCCTTCCATCTGCCATGGCA AATCTTGGATGGTATGAAACTTACCATACACTAATTGCATACAACAGTTTTTTTTCCCAGAAGATTTAGAGTTGTGAAAT TGTTTGACGTTACAAACAACTTACTATGATATTAATGGTGGATCTTAATTATAGCATGGATCCGTTTCTTCACCAAATTG TGTTATATATAGTTTAAAAAGTTTTTTATCCACACAAATCATAAAACTATTGGTTTTCATCTCTGTAAAAAAAATTCTCT GATATACATCCTTAACTTTCGTTGATATACATGTTTGCGTTAGCAATAACTAAAGAAAAATAAGATTTGAAAGACTATTT TTAAAGTGATTGTCTGTCTTCAAAATTGTATTTTGAGTCTTTGAATTTTGATTTTATATAGGCTATGGTATGTTTAGCTG ATAAGCTAGCTGAAAGCTTATAAGCTAGCTGATAGCTTAAAGCTGATAAGCTAGCTGAAAGCTGATAGCTGAAAGCTGAA AGCTGAAAAGCTACGTGATTGAAACAAAGTGTTTGGTAAAACTAGCGGTTAAACAAGCTGAAATTGTAAAATGACATAAA AGGATATACTTGTATAATTATTTTTATTTTTAACATTACTTTATTTTCACATTAATACCAATATGATATGAATATTAAAA TTATTATCACTTTAAATATTTTTATTAGCTCCAGTTATTTATCATCTTAAAAATATAATATTTATTTTCATTTATTTTAT TAATATAATATTTATAATACTTGTGGTGCGCAGCGGTGTGGCGGGAACGGTGGCGGAAACTGCATACGTAAGTGTGAGGG GAAAATAGGTTTAGTGTTTTTATAAATAGAGATTAATGGATATGCACTGTCAGTGTAAAGAAGTTTTACACTGACGTCCA ATTACATTATGCCACATAAGACTAAGTAGTTACAAATCTTTTTAATTTTAATTAGTAAATTAATAAATTGCTGATGTGGC GGAAATCAATTGGGTGCATGTGTAAAACAAGTTTACACTGTCAGTGCATCTCCTATTTTCTCTTATAAATATATAAGGGT AATGGTAGAATTTTAATAAAATAATAAGGATAAAAATGAGAATAAATTTAATAAGCTATAAGCTTTAAGCTATAAGCTAC CTGAGATAGCTTATAGCTTAAAGCTTTAAGCTACTAAAATAAGCTCCTTCACCAAACACTTTTTTCGCTTTTAAGCTAGT CAAATAAGCTTTAAGCTAGTCAAATAAGCTATAAGCTAGCTGAAATGGCATGCCAAACATAGCCATAGTCTCTTCCAGCT AGCTACAAAGACTCAAACTTTTGTATTTCCATAAACTGTAGACAAATAAAAAAGGCTTTGTTAGGGTACCCAATGGGAGG AGTTGGAACACTTCAGCTTATTATTTTAGTATAAATAACTAAATTGTAAATTATAAAAAAAAATAATGAAAAAAATATCA TAAATTAAGCCTAATAAAGAGTATAAAACCTCTTAACTTTTAGATGGGTACTAAGAAATTGTTGTGAACATATGTTTATT GAGTTCGCATTTAACAATGGAATGATCTTCAATTAACTAGCCACTGACCTACAAATATTTAAATGTTTAATTTTTTTTTT GTTAACTTATTTCTTTCACACATTTTTAGATTATGAAAAGGATAAATATACAATATAATGTGTGTGAATTTATAACTTAG AAGAAGGCTTAGAGCATCCACAATCATGGTTGTTTATATGAATTTGACTTCATCCTTGTTGCCCCATTATTCTAATAAAA AAGTGGAATTTCAGCATATGGTATGTGATTCTATGTATTGTCCATGCTTCATGCCCAAGTGGGCTATTGCGTGAAGGAGT ATGTTAGAAATATAATATACTTTAGGATAACTGGTTATTCCACTTACTGACATTGTAATTTCTTATTTTTTTCTATAACT CATTTTTTTTCACTTAATAGAGAAAGAATTGTTAATGCAAAATAAAGAAAGAATACTATTTTAATCATAAGATATAATAT AGTTGCTTGTAGAAGCATCAAATCTTATTTTTAAGCTCTTTGGGGTGTCGCAAAACTTTGCTCTAATAGTAAAAAAGTAG GTATAGTTACTTTGTAATAAGATACTCCCATGCTATCATGTCCCTCAATTCTTCTAATTTTTCACTAGATACTGAAACAA TTCGTAGTAATTTTTTAAGAACAAAAGATTATTTTGACTCCAACAAACTTTTTCTTGAAGCTATGCATCATACAACCAAT TCACAAATTTCAGAAATTACTAGTACTTATTAAAATGAACTCCATCTTGTCTTTCCCCTCTGCTAAATGTTTGGTCTATT TCTCCCCAAACCTGTTTTTTCCTACAAAACTTCTTAAAACTTTGTTCATGTTTCTTACAATCTCCAATTGCAGGGGTCCT GGTGTGACTATACTGGTCCTCTCATGGATCATCACATTGTACACGCTGTGGCAAATGGTTGAGATGCATGAAATGGTTCC TGGAAAACGTTTCGACAGGTACCATGAACTGGGTCAGCATGCATTTGGTGAAAAACTTGGTCTTTACATTGTGGTGCCTC AACAACTTATATGTGAAGTTGGTGTGGACATTGTTTACATGGTCACTGGAGGAAAATCACTGCAGAAAATCCATGACCTT GTGTGCAAAGATAATTGTAAATCAATGAAGACCACTTACTTCATCATGATCTTTGCCTCTGTTCACTTCGTCCTGGCCCA TCTTCCCAACTTCAACGCCATCTCCGGCATCTCATTGGCTGCAGCAGTCATGTCTTTGAGGTATGCTTCTTCGTAATTTT GATTTGCGTGCGACAAGTATCTTCTACCAGAGATAATCATGTTTGAACAGTGAACCTTCGCAACTTTTTTTTTATCTAGA TCACTTTTAATTCAAAAGTTTGTGATTTCTCAGTTAAGTTTTGTAACTTTTGCTTGAAAACTTTTATAAACTTGTTGAGA AAGCTTACAAATTGAAAGATAGAACTATAAATGAAAAAAAAAAGTTACAAAGGTAGGCAATGGTAGAATACAAAGTGAAT GTTGTAAATTTTTTTTCACTTTATCCTTAAAGTATGAGCAGTTTTTGGATCTTGACTTCAATTTAAACAGCAATGCTATA TGTTAGGAAGGAAAATTGCAAGAAATACCAATATGACAAAGCTAATTTTGTTATTTGATAGAAATCATAGGGGAAATGGG TGACATTAACTACCACTTGTATTAGTATTATTTTCCCAATTCAAAACATGATTGGGATTGATTGGAATTGATTGGAATTG TGTGCAGTTACTCGACCATTGCATGGGGGGCAGCAGTGAAAAAGGGAGTTCAGGAAGATGTGGACTATGGCTACAAAGCC ACCACTACACCAGGAACAGTTTTCAATTTTCTCAGTGCTTTAGGTGATGTTGCATTTGCCTATGCTGGACACAATGTGGT GTTGGAGATTCAAGCAACCATCCCTTCCACCCCAGAGAAGCCATCTAAAGGTCCCATGTGGAAAGGAGTGTTAGTAGCAT ACTTCGTTGTAGGCCTCTGCTACTTCCCTGTTGCTTTTGTTGGATATTACATGTTTGGCAATGAAGTTGCAGACAATATC CTAATCTCTCTTAACAAACCAACATGGCTTATAGTAACAGCTAACATGTTTGTTGTCATTCATGTTATTGGAAGCTACCA GGTCAGTAATAACAGTTTTCCTTTCTCTGCATAATTCATCCCTACATATATAATCATCTAAGATTTTATTCTTTCTTTTA TTGATTGGTGTCTATGCATTTCAGCTATTTGCAATGCCAGTTTTTGACATGATTGAAACTGTAATGGTCAAGAAGTGGCA TTTCAAGCCAACCGGTCTGCTACGATTTGTGGTTCGCAATACATATGTTGGTGAGCAAATTTTCCCCCTAACTGTTACAT GATATGTAAGAGAATTAGATCGTGAATAAATCATTACTCAAAAGTTTAAGATGTTGTTGGGTAAAGAGACTTGAATTATT TTATATCATAGTTATAAGTTAAGTAAGTGTCTTTGTTAAATCTTGATTTCAGCATTCACAATGTTTGTGGCCATTACCTT CCCCTTCTTTGGTGGCCTCCTTGGATTTTTTGGAGGATTTGCATTTGCTCCAACAACATACTTTGTAAGTCCCTGGAAAT ATCCCTTGTACATGTAATAGATGACTATGCTTTCAATGTCACTAACTGCAATTTTTTTTAACATAATGTCATTGATCTCT AGCTCCCCTGCATTATGTGGCTTGCTATTAAGAAACCTAAGATGTTCAGCTTATCCTGGATCATCAATTGGGTATGTTCA ATCATGTCATCCTGCTTCTTATTACTATAATTTGTTGTGAAATATATTTTTTATATTGGAACTTAGTTTGTATCTGTGAT ACCCTGTTTGCAGATCTGCATCATACTTGGACTCCTGCTAATGCTTCTGTCACCAATTGGTGGATTTAGATCAATCTTAT TGAATGCAAAGAACTATGGGTTCTACACTTGA
CDS sequence (LotjaGi1g1v0619400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTGGAGCTGGTGTGTTGAGCCTTCCATCTGCCATGGCAAATCTTGGATGGGGTCCTGGTGTGACTATACTGGTCCT CTCATGGATCATCACATTGTACACGCTGTGGCAAATGGTTGAGATGCATGAAATGGTTCCTGGAAAACGTTTCGACAGGT ACCATGAACTGGGTCAGCATGCATTTGGTGAAAAACTTGGTCTTTACATTGTGGTGCCTCAACAACTTATATGTGAAGTT GGTGTGGACATTGTTTACATGGTCACTGGAGGAAAATCACTGCAGAAAATCCATGACCTTGTGTGCAAAGATAATTGTAA ATCAATGAAGACCACTTACTTCATCATGATCTTTGCCTCTGTTCACTTCGTCCTGGCCCATCTTCCCAACTTCAACGCCA TCTCCGGCATCTCATTGGCTGCAGCAGTCATGTCTTTGAGTTACTCGACCATTGCATGGGGGGCAGCAGTGAAAAAGGGA GTTCAGGAAGATGTGGACTATGGCTACAAAGCCACCACTACACCAGGAACAGTTTTCAATTTTCTCAGTGCTTTAGGTGA TGTTGCATTTGCCTATGCTGGACACAATGTGGTGTTGGAGATTCAAGCAACCATCCCTTCCACCCCAGAGAAGCCATCTA AAGGTCCCATGTGGAAAGGAGTGTTAGTAGCATACTTCGTTGTAGGCCTCTGCTACTTCCCTGTTGCTTTTGTTGGATAT TACATGTTTGGCAATGAAGTTGCAGACAATATCCTAATCTCTCTTAACAAACCAACATGGCTTATAGTAACAGCTAACAT GTTTGTTGTCATTCATGTTATTGGAAGCTACCAGCTATTTGCAATGCCAGTTTTTGACATGATTGAAACTGTAATGGTCA AGAAGTGGCATTTCAAGCCAACCGGTCTGCTACGATTTGTGGTTCGCAATACATATGTTGCATTCACAATGTTTGTGGCC ATTACCTTCCCCTTCTTTGGTGGCCTCCTTGGATTTTTTGGAGGATTTGCATTTGCTCCAACAACATACTTTCTCCCCTG CATTATGTGGCTTGCTATTAAGAAACCTAAGATGTTCAGCTTATCCTGGATCATCAATTGGATCTGCATCATACTTGGAC TCCTGCTAATGCTTCTGTCACCAATTGGTGGATTTAGATCAATCTTATTGAATGCAAAGAACTATGGGTTCTACACTTGA
Protein sequence (LotjaGi1g1v0619400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGAGVLSLPSAMANLGWGPGVTILVLSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLICEV GVDIVYMVTGGKSLQKIHDLVCKDNCKSMKTTYFIMIFASVHFVLAHLPNFNAISGISLAAAVMSLSYSTIAWGAAVKKG VQEDVDYGYKATTTPGTVFNFLSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWKGVLVAYFVVGLCYFPVAFVGY YMFGNEVADNILISLNKPTWLIVTANMFVVIHVIGSYQLFAMPVFDMIETVMVKKWHFKPTGLLRFVVRNTYVAFTMFVA ITFPFFGGLLGFFGGFAFAPTTYFLPCIMWLAIKKPKMFSLSWIINWICIILGLLLMLLSPIGGFRSILLNAKNYGFYT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 1 | 383 | 383 | 8.6E-102 | ||
| PANTHER | 1 | 395 | 395 | 8.4E-201 | – | |
| Phobius | 1 | 15 | 15 | - | – | |
| PANTHER | 1 | 395 | 395 | 8.4E-201 | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Phobius | 16 | 37 | 22 | - | – | |
| Phobius | 38 | 112 | 75 | - | – | |
| TMHMM | 111 | 128 | 18 | - | – | |
| Phobius | 113 | 131 | 19 | - | – | |
| Phobius | 132 | 136 | 5 | - | – | |
| TMHMM | 133 | 155 | 23 | - | – | |
| Phobius | 137 | 157 | 21 | - | – | |
| Phobius | 158 | 220 | 63 | - | – | |
| Phobius | 221 | 243 | 23 | - | – | |
| TMHMM | 222 | 244 | 23 | - | – | |
| Phobius | 244 | 262 | 19 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 263 | 285 | 23 | - | – | |
| Phobius | 286 | 305 | 20 | - | – | |
| TMHMM | 302 | 324 | 23 | - | – | |
| Phobius | 306 | 326 | 21 | - | – | |
| Phobius | 327 | 331 | 5 | - | – | |
| TMHMM | 329 | 351 | 23 | - | – | |
| Phobius | 332 | 353 | 22 | - | – | |
| Phobius | 354 | 364 | 11 | - | – | |
| TMHMM | 363 | 385 | 23 | - | – | |
| Phobius | 365 | 389 | 25 | - | – | |
| Phobius | 390 | 399 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0619400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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