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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0622100 |
| Transcript ID | LotjaGi1g1v0622100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Adenylate kinase; TAIR: AT3G01820.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8L7W7|KAD7_ARATH Probable adenylate kinase 7, mitochondrial; TrEMBL-Plants: tr|I3SZ93|I3SZ93_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0622100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116931971..116935829) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTATCTTCATTCCACACCAACCACGACATGTCAACTAGGAGCCATTATTCACGCGGGGCTCGCTCCCGCCACGCACT CCCGAGTGGCACCCTCGTAATTACAACCAAAAAAACAGTACCATACTGTCATTTCCAAACCCCCGAACACCCCCCTCTTA AAACCTCAGGGTTCCACTTCTTACATTAACTCTTCCCGCAGCCACTCCCATTTTCTCTCGCTCCCTCTCATTCCAACACC GCCGCCATGGCCGCGATCGCGCATCTGAGAGCGGTTGCGCGGCCACTAAAATCCCTCCGCCTCCTTTCTCACCGCGCTTT CGGATCCGCCGCTGCGGTCCAGTACCACTCCGACGAAGAGGACGACGAGCTCGATCACCGCTTGCCACGTAGCACTCTCG ACACGGAGGGTTCGGCGCCGGCGCGTGGAGTTCAGTGGGTGATGATTGGTGAGCCTGGCACCAAGAGACACCTCTTCGCC GAGAAGCTCTCGAAGCTTCTCGAAGTTCCTCACATTTCCATGGCCTCGCTCCTCCGCCAGGAGCTTAACCCTCGTTCCTC GCTCTACCAGCAGGTAAAAACTCATCAATTTCTAGGGTTTCTCTTTGCTTTCTTCGTTTTGCCTCTAATTTAGATTAATT TCTTAATAACGTTTCACTTTTTGATTTTTCCGCTCCCAGAATTTCAAGTTAAAGGTAGCGTTTTATGTTGTAAAGAGAAG CATATTGTTTTTTTAGGTAAAAAGAAAGTTATATTCACAATAAATTAAGCTACCCTAATACAAAAAGTTAATTAAAATGT GATAGGAATGATGCATGTTAAGCTTTGTATTTGAAACAATGTGTATGAATTGAAAATTGGGTTGAATGAATGCTTTTACC TTTTTGTATTGATGATGGTTTATGATGTTTTTTTTTTCTTCCTGTAAATTGTTAGTGTTTGACTTTGAGTTCTTCGAATT CAGATAGCGAATGCTTTGGATCAAGGAAAACTTGTCCCTGAGGAGATTATTTTTGCGCTGCTATCGAAGAGGCTGGAGGA TGGATACTATAGAGGTGAAACTGGATTCATTCTTGATGGAATCCCTCGAACGAGGATCCAAGCTGTGAGTAGTTTCGTGT TTTCTCAATCGTAAGCTGCTAGGGATTTTTCGAGAAATTTGAGTAGTTTGCTCTTTTGAACTCTTTAGATGTTAGTTGCT GATTTACTTATTCTTCAAATGCGCAGGAGATTCTTGACCACATTGCTCATGTTGATCTAGTGGTGAATTTTAAGTGTCCG CAAGAGGATTTAGTGAAAAAGAATCTAGGAGCTCGAAAATTATCTTCTTGCCAAGAATATGTTTTTATGAACAGCTCCTG GACCCTGAACAAGCTATCACCGAATGAACATGTCCACAATCATGCAGAGGAGGTGACTATACATCATCTTTCTTTCCGTT TCAGAATGTGATTATTGACATTCTAGTTTGAGATTGTCTAAATATACTAGCCACTTTTCCTTGAAACTTTTAATGATATT TTGTTTTTTAATTTTCTAGTGCAAGATGTTGGAAGATTACTACAGGAAGCAGAAGAAACTTCTTAATTTTGAAGTAGCAG GTGCACCTGGAGAAACATGGCAGGGACTTCTGACTGCGCTGCATCTCAAGCATATTAATGCTCTTAGTTCTTCACAGAAG TTGACTGCTTGAAGGGCCATCAATCTTTTGTGGCACCTATCCCTTGTCGGCATTATAGATATGTGAATATGAGCCAGAAT TTGATGGAAATTTTGTGATGATAGTAATTTTAAAAAATTTGAGAATGTTGTTAGTTTGTTCTGTAGTGTAGCAGTCTTAA AGTAAGAATCCATACACATTGTATGACCACCACTAATGCCTACTAGTGAGGTCTTTTTTTGTTTAGGTTGTGTCCCCAAT TTGTCTTTTCTGGTAAACTTTGCCTGGTCCCAGTCCCAGCGAAGGACACTTTATATTGGCTTTCAAGTATAAGCATATGG TGTTGTAAAACTTTAGGAATTCAAGATATTTTTTGTTAGGCTTCTGTCACAGATACTGTTTGGTGTACCTCAGTCTAGTT ATTTTACTAGATCCGATGAGGTTCTTCGTAGATTTGCATTCCATTTGGTCAGAAGACCCAAATTATTTGTTTTTCTTCCT TTCAGGTCATGGGTAATTTCAAGATTGATATATTTGGCTTTTCAATTGAGGTAAATTGAGCTTGAATTTTATTGGGTTTT TGGAACTCGGATTCAAATCAAGCAAGAACAACACATGTAAGCTACCGTGTATATATAAACAAATCAGAATCTAACATCAC AGGTGAAGTAGAAGTTTACGCATCTACTTACAAGGTTTTGAAATTTCAAGAGTCCTTGGGTTATGAAGTATTTCTGCCAA AAACCCGGAAACCACTTCATGGGAAACCATCGCCAAAATTGGAATCAATTCCCACATTTTCCCAGCTACCCCCATTGAAA TCTTGGCTGCTACAACCACTGCATTGCCATGGGTGCTTAACGTCACAATGGCCTTGTTGCTATCCTTTGTGACTGACTTT TGCGTCATCATGTTGTGTTTTGGCCACCAAGCTAGCCTCCACGGCTACCACCATTGCCCCGCTACGGAGCACAGCTGCGA AACCCCATAACCACCATTGGCCAAAACCCTCACTCCGACAAACCTCGTTGCTTCACCATTGTGTTACTGTGTCGTCATCC TTGTTACCAGCCACTGCTCTAGATCGCAAACTGCCACCTAGTCTGACCACTATCTCGAGCTCAACCTCGCGACGTCGGAG GTCACCGTGTCTAGAGTCATGGTGGATTCGAGCAGGCCTCCACAACCCACACCATAGCCTCCATCAAACCCCTCCCTTGT GAAATCTTAGTGCAAGAGAGCCACTACGAGCTTCGCCGTGATCCGCTCCGTGTTATCACCCTTGCAAACCATCATCGTCT CGGGCATAGTCTTCTCCGCAATGAGCTAGGTTGCAATCTCTTACCCTCTCCCTCTCGTTCTTTCTCATGCTGAACTCTCT CCCGCTTCAACTTTGTGACGATGTTCTTGGTGGGAGCGTTTGTTTTATTTGAAAAGTTGGGTCTCTTGACCCCCTCTTTT GTGTTTTTTTGTTTTTGTTTTAAATTGATGTAGTACGAGAATGCATCATTTTCATGGGTGGTCGGATATACTGATGGGTG GCTAGAGGTGGTGGTGGTGATGATGGCACAGGTGACTCGTGGTGAAGGAGTGGCCAGACATAAACTTTTAAATTGACGCA AAAATCCCAGAAATCCCTCGACTATATGGTGGTATACTATAGAGACTTTTTTTAGTGACTTATAGACATTACCAACATGA TATGATCTTATTATACATTACAAGCACATGCTACATTATTTATATGCATTCCATTCTCATCATCTCGCTTTTTAATATTT GGTTGTTTATCCTCTTCTAACCCGAGAGTACATATCATTTTTACAGTGACATAACAGTAATGTTACAGAAAGGGTGAAAT CTGATCACTCGCTGTTCATCCAAACATTCCTAAGGAGTTCATATCTGACAGCAGATTCGGTGCGACTTTCTTTTTTCTTC CAGTTGGGTTTTGTTGATACTGGGGATGGGGAGCCACTAAATAATATTGAAGATAATGGCGAGTTTAACTCATCGAGCTC GTCATCACTGGTGTATGACTTCCTGACAACAGAAGATTTGCTTCTTCTCAGCTGAGATTCACTTCCAATATCCCCAGTAA TGCTTGCAATGGTTGTTGCTGGAGGAGGTGAATATACAATGGGAGCGGCAATGCATGGGAAGTTGTTGACAGAGTCTTTT CCGTCCTCGAGATCATCCT
CDS sequence (LotjaGi1g1v0622100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCGATCGCGCATCTGAGAGCGGTTGCGCGGCCACTAAAATCCCTCCGCCTCCTTTCTCACCGCGCTTTCGGATC CGCCGCTGCGGTCCAGTACCACTCCGACGAAGAGGACGACGAGCTCGATCACCGCTTGCCACGTAGCACTCTCGACACGG AGGGTTCGGCGCCGGCGCGTGGAGTTCAGTGGGTGATGATTGGTGAGCCTGGCACCAAGAGACACCTCTTCGCCGAGAAG CTCTCGAAGCTTCTCGAAGTTCCTCACATTTCCATGGCCTCGCTCCTCCGCCAGGAGCTTAACCCTCGTTCCTCGCTCTA CCAGCAGATAGCGAATGCTTTGGATCAAGGAAAACTTGTCCCTGAGGAGATTATTTTTGCGCTGCTATCGAAGAGGCTGG AGGATGGATACTATAGAGGTGAAACTGGATTCATTCTTGATGGAATCCCTCGAACGAGGATCCAAGCTGAGATTCTTGAC CACATTGCTCATGTTGATCTAGTGGTGAATTTTAAGTGTCCGCAAGAGGATTTAGTGAAAAAGAATCTAGGAGCTCGAAA ATTATCTTCTTGCCAAGAATATGTTTTTATGAACAGCTCCTGGACCCTGAACAAGCTATCACCGAATGAACATGTCCACA ATCATGCAGAGGAGTGCAAGATGTTGGAAGATTACTACAGGAAGCAGAAGAAACTTCTTAATTTTGAAGTAGCAGGTGCA CCTGGAGAAACATGGCAGGGACTTCTGACTGCGCTGCATCTCAAGCATATTAATGCTCTTAGTTCTTCACAGAAGTTGAC TGCTTGA
Protein sequence (LotjaGi1g1v0622100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAIAHLRAVARPLKSLRLLSHRAFGSAAAVQYHSDEEDDELDHRLPRSTLDTEGSAPARGVQWVMIGEPGTKRHLFAEK LSKLLEVPHISMASLLRQELNPRSSLYQQIANALDQGKLVPEEIIFALLSKRLEDGYYRGETGFILDGIPRTRIQAEILD HIAHVDLVVNFKCPQEDLVKKNLGARKLSSCQEYVFMNSSWTLNKLSPNEHVHNHAEECKMLEDYYRKQKKLLNFEVAGA PGETWQGLLTALHLKHINALSSSQKLTA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 268 | 268 | 1.2E-118 | – | |
| PANTHER | 1 | 268 | 268 | 1.2E-118 | ||
| Gene3D | 57 | 261 | 205 | 8.2E-37 | – | |
| SUPERFAMILY | 61 | 252 | 192 | 2.96E-16 | ||
| CDD | 63 | 243 | 181 | 2.95237E-39 | ||
| PRINTS | 65 | 78 | 14 | 5.4E-8 | ||
| Pfam | 66 | 231 | 166 | 9.1E-23 | – | |
| PRINTS | 93 | 107 | 15 | 5.4E-8 | ||
| PRINTS | 144 | 160 | 17 | 5.4E-8 | ||
| ProSitePatterns | 144 | 155 | 12 | - | ||
| PRINTS | 217 | 231 | 15 | 5.4E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleobase-containing compound metabolic process | Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids. | ||
| Molecular function | Nucleobase-containing compound kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate. |
Expression pattern of LotjaGi1g1v0622100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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