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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0631400 |
| Transcript ID | LotjaGi1g1v0631400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | B3 domain transcription factor; TAIR: AT3G26790.1 AP2/B3-like transcriptional factor family protein; Swiss-Prot: sp|Q9LW31|FUS3_ARATH B3 domain-containing transcription factor FUS3; TrEMBL-Plants: tr|K7MFA4|K7MFA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0631400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:118511207..118515580) extracted from Lotus japonicus Gifu genome v1.2.
CCCCAATGCACAACCCAACCCAACTCAATTATTATTAACCCTGGTTTGTTTTGTTCACACCATCACAACCAGAGAAAAAA GCCAAAAAGCCAAAGCAAACCATGAATCGGGTCATAACACATTGCCACTAAAACTGATCCTTTCTCATTACCCATAACCC ATTTACAGATAAAAATCTGGCAAGAGAAAGAGAAAGAGAGAGAGAGAGAATTTATGGTGTGGTGGTGGAGTAAAAGTAAA AGGTTGCAAAGGGAGAGGAGAATGAGAAGGGCGTGAATGCAGAATGCACAAATGTCATAAAAACCAGTCCCTCTAATTCA CCACCAACAAAAAAATCCTTACCAAAAATAGAAAAAATCCAAACAAAAAAGAAAGAACACCCTTCACCATTGATCTCTCA AACACCAAACCCCACACCCATTTCGTGATTGCCGAGCGTCGTTTGATCTTCTTATCTAAATCTGCACAAACACTGAGAGT GAGTAAGAGAGTGAGAGAGAGAGAGAGAGAAAACAGCCAACTAGAACTAGAGTCACAGAAAACCAAAAGCACTGTGGGAG AGTGTGTGGGAAACTGAAGAGAGAAAGAAAGAAAAAGAAGGCTAGCTAATGATGATGGATCAGCAAGAGAAGAAAACCGA GGCGTGTGGTTTTGTGGCAGGTGTTGGAGCTGAGCTTGGGTTTGGGTTTGGGTTTGTCACCGTGCAAGGAGACAACAAAA TGGTAACACCAAACGGGTCGTCATCGGGTCGGATCTGTGATGATGGGCTTGTTGCTGCTGTTACCACCACCTTTGGAACG GTTCACAAGAAGAAAAGGATGGCCAGACAGAGAAGGGTCTCCTCCACCACCACCACCACCACCACCACCACCATCATCAG CAGCAACAACAAAAGTCCCACATTGCTTGCTGCTGCTTCCAGCTCCTCGCACGTGCCGATCTCCCCGCTTCCTTCTCATA AACCTTCCAAAACTCTCCCTCCCGCACGTGTGAGTTCTGCTATTTAATTTCCTTCGTCTTTTTTTTTCACATTTTTTTCT TCCAAAATGATGATCTGATATATACAATATTTATATTTATGTATAGATATACCTCAGCTAGCTTGGTTCTGAATTCTATA TCTTTTGGATTTATTGTCTTGATTTTCAACTACTACCATCCCCCTTTTTTTGAAAATAAAAAAAATCGGATCTCATGAAT ATGTATCTAGTTACTCTTTTTATATCTATGTGGATATCTCATGGATTTGCAGACTGAACTTCTAGTTTTTCTTTAGATCC TTGTGTTAATCTGTTCCTCTCGTGATTCTCACTCTGTTGTTTTTGGTACAATATCTTTTCCAATGCTAAATGGAAGGGCC ATTCTAATACACACACTTTTATCGTTGAGAATTACTCATTGACCTCATAATTTGAGGGTTTTCTTTCATTCACACATATT TTTCATAGAATTATTTTTTTTACTCATTTTATCTTTTTATTTCTCTTCTTTTTATCTACTATATCTCGCATTTTCGGTCT CTTATCTCTTTTTGGCTGTGAGTGCATTTTGGATGTGAGTGAAATATTATTGTAATTCCAATTTTAGGAAATGAGATATG GAAGATATGTAATTTTTTAATGCATTAAACCCCCCCCCCCCCCCCCACTCCCAAAAAAAAATAATGAAAATGAAATATAG AATATTAAAACTAATTATTTCGAAGAAAATCTATTTAAAAAGTAAAATGAAAATGAAATTAAAGTGAAGGCGTGGGCTAT TCTTTTTCTTTGTATTCCTCAATGTTGTACTGAAATGAAGTCGTTAAAAACAAGTCAGACATATTTCGATTTCCAAGCAT GTGTGAATCTAGTGGTAACCTTTTTTTTTTATTAATTATCTAGTGGTAACCTTGTGTCAGATTATATAGAGTTATAGACA CAAAAATAAAGGGGAGACACTTTTAACGCGCTGTGCTACAAGGGGCAACATCAATATATGGGATTATGGGTACGGAATTA GCCTGAGGGTGTTCCTCAGTGAGGAACACTCGGGCACCGACCAAAAGCGAATTTAGTTAGTACTATATATATGTTTCAAC CTTTTATTTATTTATTTTGGTAACAAAAATGGTAGGACTTGGATAGACACTTTCAACTCTATCAGACAACGTCCCAATAA CACTTCGGCCTGGGATTATTGTCTCGTCTATTACCCATGTGGAAGCCAATAAAGGCTCACTCTAGTGGCATGCCGGAGTG ATGAGATTTATTTGAGTAAGAATGTCCAACAACTTAGATTTATGTCCAACCCATGTTGGCACACCTGCAAGGGGTGACAG AGTCACTTTCTTTGTAACCTATTTTTACTCTACTTTTTTTGGGTGGGCAGGAGAAGAGTGGAATTAAGGCGATTAATTGC AAAATTGCCAGATATGCAGTATATATTATACATGGCTACTGTTATTGGATTAACTATTAGTATGTTGATTAACTCATCCT TGGAAGCCGAAAATTTTGTACTGTTTGTTCTCTAAATCTTAGGTGTTGTGCTTAAACAAATAGAGAAAATTTGATGATTA GAGGTAAATTGACGGCTTCCACATTTGGGAATTTGTGTATTTCAAGACATACATGAAGCATGCTGGACAAGGCTTTGGGT TCTCTGCCTCTTTACCACTATTAGTATTGACTTGATGTCCTCATGTTGGCCATGTTGGTTTTGACTTGATCCACTTTTAG TGGCATTACATTATAATTTGCTTTAGTTTAATTTTGTTTTTTTAAAATGGCCTAACAATTTCATCTATTTACTTGTAGAA AATCGATCCTAGAAGGTTGAAATATCTTTTCCAAAAGGAGTTGAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGATAT TGCCAAAGGTTTGGTCTTCTCTCAATGCTCTTTCTATATGTGTAAATTTGTCTCAACTTGTTCTATAAACTATTATGACC CTATAATGGATGAAATAATTGGCCAACAAATTATAACTTGCAGAAAGCAGCAGAGTCTTTCCTTCCAGCCCTTGAGTCAA AGGAAGGAATTTTCATCAACATGGATGATATAGATGGTCTTCATGTATGGACTTTCAAGTACAGGTATGGTTGATTTATT TTGATAGCCATGACAAGAGTTTTTTTGGTTTGAACGGAATGGCAAGAGTTTAAATTGCAGTTCCGTTGCGAAAATTGCAG ACAAATGCAGGTTGATGCGGTTGCAATTGCAATCCCGACACCGTTGTGGGGACACTAAAACCCTTTAAGTTGCGGCCACA ACTGCAGTCGTGGACCGCAATATAAAACCCTGTCCATGACATACAATTAAATTAAAATTGAATGCTTAATCACATTCTTT TACAAAAGAAAAATGATATTAGTTGAATATTTAAGGTTATTTGTAATTAGTTGATACAAACAGTTCAAATTCATATGTTA TTATGTTTGTATTTGAAATGCAGGTTTTGGCCTAATAACAATAGTCGGATGTATGTACTAGAAAACACTGGTATGTTTAA TTTACTCAAACTAATTTTCTAATTCTATTTTAGAGTAAAGGGACTTATATTATACTGGTGTATAATTTTCAGGAGACTTT GTTAACACACATGGCCTGCAATATGGAGACTCCGTTATGGTTTACCAAGATACTCAAAATCTTAACTATGTACATGCTGC GATAAAACTAATTTGAACAGTTTCATTTTCAATTCTGAAACTTTTAATTAATCATGTTAGTTTTCTTGTCCAATTAATTT GTTACTTGTTTGCAGGTTATTCAGGCCAAAAAGGCTTCTGATCAGGATGAGTTTCAGGAAGAAGAAGAAGAAACACCAAG TGATACCGTCAATGACATGCTCCTCAATGACTATGAGGTGAGCAAACCTGATTGTGATTGCTTCAATGGATATGATCCTG CAGTGAATGACACCACAGGCATGTCATTCATATATGAGACAACTTTCTCAAATGACTCCCCACTTGATTTTCTGGGTGGA TCAATGACCAATTATTCAAGGATTGGACCAGTTGAAACCTTTGGTTCTGTTGAGAATTTGTCACTTGATGAATTTTACTA AGGCGTGGGGTTTTCTCCAATTTGGTACTAAAGGAACATTGATGTGTGTGTGGGTTTTGCTTTTTTTGGGTTTTCATGAC AATGAGAGGATTTGCGTAGAATAAAATAGTGGCCTGTGGACATGTTTTTGTTCCTCTCTCTTGAACAAGTGAGACTGCTC TGCCATGTATTAATTACTTATGATTTTTGCTGGATAGCATCTATATAAATGATTCTGAATGTTTCATTATGGATAATTTT GTACAATATGCAAGTAACTAAATCATGCAAGAGGGTATTGTCGTCCCATATGTG
CDS sequence (LotjaGi1g1v0631400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGATGGATCAGCAAGAGAAGAAAACCGAGGCGTGTGGTTTTGTGGCAGGTGTTGGAGCTGAGCTTGGGTTTGGGTT TGGGTTTGTCACCGTGCAAGGAGACAACAAAATGGTAACACCAAACGGGTCGTCATCGGGTCGGATCTGTGATGATGGGC TTGTTGCTGCTGTTACCACCACCTTTGGAACGGTTCACAAGAAGAAAAGGATGGCCAGACAGAGAAGGGTCTCCTCCACC ACCACCACCACCACCACCACCACCATCATCAGCAGCAACAACAAAAGTCCCACATTGCTTGCTGCTGCTTCCAGCTCCTC GCACGTGCCGATCTCCCCGCTTCCTTCTCATAAACCTTCCAAAACTCTCCCTCCCGCACGTAAAATCGATCCTAGAAGGT TGAAATATCTTTTCCAAAAGGAGTTGAAGAACAGTGATGTTAGCTCCCTTAGGAGAATGATATTGCCAAAGAAAGCAGCA GAGTCTTTCCTTCCAGCCCTTGAGTCAAAGGAAGGAATTTTCATCAACATGGATGATATAGATGGTCTTCATGTATGGAC TTTCAAGTACAGGTTTTGGCCTAATAACAATAGTCGGATGTATGTACTAGAAAACACTGGAGACTTTGTTAACACACATG GCCTGCAATATGGAGACTCCGTTATGGTTTACCAAGATACTCAAAATCTTAACTATGTTATTCAGGCCAAAAAGGCTTCT GATCAGGATGAGTTTCAGGAAGAAGAAGAAGAAACACCAAGTGATACCGTCAATGACATGCTCCTCAATGACTATGAGGT GAGCAAACCTGATTGTGATTGCTTCAATGGATATGATCCTGCAGTGAATGACACCACAGGCATGTCATTCATATATGAGA CAACTTTCTCAAATGACTCCCCACTTGATTTTCTGGGTGGATCAATGACCAATTATTCAAGGATTGGACCAGTTGAAACC TTTGGTTCTGTTGAGAATTTGTCACTTGATGAATTTTACTAA
Protein sequence (LotjaGi1g1v0631400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMMDQQEKKTEACGFVAGVGAELGFGFGFVTVQGDNKMVTPNGSSSGRICDDGLVAAVTTTFGTVHKKKRMARQRRVSST TTTTTTTTIISSNNKSPTLLAAASSSSHVPISPLPSHKPSKTLPPARKIDPRRLKYLFQKELKNSDVSSLRRMILPKKAA ESFLPALESKEGIFINMDDIDGLHVWTFKYRFWPNNNSRMYVLENTGDFVNTHGLQYGDSVMVYQDTQNLNYVIQAKKAS DQDEFQEEEEETPSDTVNDMLLNDYEVSKPDCDCFNGYDPAVNDTTGMSFIYETTFSNDSPLDFLGGSMTNYSRIGPVET FGSVENLSLDEFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| TMHMM | 12 | 34 | 23 | - | – | |
| Phobius | 12 | 32 | 21 | - | – | |
| Phobius | 33 | 333 | 301 | - | – | |
| PANTHER | 58 | 310 | 253 | 9.2E-87 | – | |
| PANTHER | 58 | 310 | 253 | 9.2E-87 | – | |
| Gene3D | 130 | 250 | 121 | 9.7E-28 | ||
| SUPERFAMILY | 136 | 233 | 98 | 1.83E-20 | ||
| CDD | 137 | 238 | 102 | 1.77722E-24 | ||
| Pfam | 138 | 236 | 99 | 2.4E-15 | ||
| SMART | 138 | 240 | 103 | 2.1E-18 | ||
| ProSiteProfiles | 138 | 240 | 103 | 9.432 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi1g1v0631400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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