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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0632600 |
| Transcript ID | LotjaGi1g1v0632600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sialyltransferase-like protein 2; TAIR: AT1G08660.1 MALE GAMETOPHYTE DEFECTIVE 2; Swiss-Prot: sp|Q8VZJ0|SIA1_ARATH Sialyltransferase-like protein 1; TrEMBL-Plants: tr|K7MXM5|K7MXM5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0632600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:118643365..118651133) extracted from Lotus japonicus Gifu genome v1.2.
TTTTATTTCTCTAGTTTTAAGGGTCTGACTTGTATTTTTTGAATTCTTTCTTGTATTAAGGATTGGTGTACCCTTATACC CCTTTTAATACAAAATTTTGCTTATCAAAAAAAAAAGTTGGGGTATTATACAAGACGTGACGTAGTCCAATTTAATCATA ATATGTTGCCTTGTTACTCCATCTTAAGAAAAGAAAAGTCGGTGCTCGTCGCTCAGAGCGTAAACGTCGTCGCTTCCTCG AACTGAAGCTGTTCCCTGCAACACTCCGGTGCAGTTCCATTTTCATGGAGTTCTAGATTCGATTCTCTCTCTCTCTCTCT GACACTGCGTTTGTGTGCCGTCGCAATGAGACAGCAGAAGCAGGTGAACAGCAACAACCATAGCAGGCAACCGAGGATCC TATATTTGGTGTTTGCCGCTGCACTCTTCTCCCTCATCCTCTTCGCTATCCAATCTTCTTTCTTCTCTGGTAATCATTCG TATCCCTTACAATCACGCAACGCAAATCCCATTCCACTTTTCACTGATTTCCTCGCTTTTTCTTTTTCAGGCTCCCTCTA CTCAGATCGTAACTCTGAGACAATTCGTATCTTGTCCCAGTTTCAGTCCTCTCTTCAGCAATGTGTCGTAAGTACCAATT CGATCTCAATACTAGTTATTATACTCATTTACCATTTGGGGTGTTTCGATTATAATAAGTCAATGTGATTTGTGAAAGTG TAAGGGCCCGTTTGGGTTTGGGCTTAATGGAGCTTAGAAAATGCAGTAAATAAGCTCCAATAAGTACTCTTTGGTTTGCA TCCAAATGGGTAGTAACTAGTAAGTCAATGTGAATTTGCTTAATATGTTTTTCTAAGATGAAACTTAGTTTTTAAACACT CTAAACTGAGGTTTGGGAAGTGCAAAGTGTAATCCAAACAAGCACTGAGTGTTCCAGACTTTATTTGGCTATATGAATTG AATTGTTTACTATTCTGGAGATATGTGCTAAGCTTGGGGTTGAAAACAGGCGAATAGGGGGCTTGGACTCACTGCACATA TTATTGACCATTGTACGTTGATCCTTAAATTCCCTAAAGGCACCAACAGCACTTGGGTATGTCTTTCTGGTGCCTGACCC ATTTTTTATTCAGTTTCCATTAATAGCGAGATGATGGTTTTTTACTAATTTTTGTTTACTATTACGTTTCAATGGTTGCA GTATAATGCGCAGTTTAAAAAGTTTGAGCCTTTGGAGTTCCAGTATGATGTTTGTGAGGCAATCATATTGTGGGAACAGG TGGATTGCTATTTTCTTATTAGCCGTGCTTTCATTGTATTTTCATGATGAATCTGTGTTGAATACTGATATATTGAGATG TTGCAGTACCGTAACATGACTACGGTGTTGACCAGAGAGTATCTTGATACTCGTCCTGATGGTTGGTTAAAGTATGCTCC AAAAAGGATAGCACAAGTGTATGGATGCCAAAACCTTACTTCTACTCTTTCTTGGTTTCAATTGCATTGCATTTGTTTGT TTGGAGCATCTTGATAGGAAACGAGTCTAATTACAAGTTTTTTTCTTATAGAGGGGTAAAGAAGTGCACTAATAGGACTA TTTGTGAAGAGAACCTCAATATATTATTACCTGCAAAACCCCCCTTTCATCCGCGGCAGTTTCGTACTTGTGCTGTTGTT GGAAATTCTGGGGACCTTCTGAAGACAGAATTTGGAGAAGAAATTGATAGTCATGATGCTGTTTTTCGAGAAAATGAGGC CCCTGTTAATCAGGTAAACCTATTAACTCACACTCGTGCTCTTTATAAAAATAATATTATCTGACAGGGCATATTTCCTG TGACCATGTCTTAATAATTTCTTCTTCCAAAAACTTAGCTTTTGTTACAATAACCACATACTAACTATCTGCTGCTTCAA ACTCCAACTATTATTATTTTTACCTCTGATCAAGATGCACATAGGTTGATGTACAGCATGACGTGTATATATCTGAAATA CTAAAAAAAAATGCTTATTTTGTCTCTTTATGAATTGTGTAGAAATATGCCAAGCATGTTGGTCTTAAGAGGGATTTCCG TCTAGTTGTAAGAGGTTCTGCTGTTAACATGGTCCCTATTCTAAATGGTTCTGGTAAGTTATTTTACATGAAAACATTTT AAACGAATATTTCAACTCTAATTGCAAAGTAGAATTTTAGCTTACATTAGTTCCATTGAGAATCTATTCATGGTCTCTAT CATTTACAAATGGCTACTATTTATAATACAGCCTTAATTCTCTGTCTGCACTCAATAAGTTATACCCATCATTTCTTACC TTAGGATTTAGAACTCTACCTTCCATAATTTTCTTGCAATATCACCTTCCTTTAGTTTTATGTTAACTTTTCTAATTTTC CCACTCTGTGAATTGTACTTTCGTGTGCCTGGTTTTCATGTCCTATGGGTAAAATATTATTATCATTTTTTAAAAATTCT GCATTATCATACAGTTGCCATCCATATATTTTTTAACTATAATGGTCTTGATGTTATTGCATATCCTACTAATTTTTGTG AATGCTTCTATTAAGTGATTAATTCTAGTATTCATTGGGAGATCAAAGTTAATATTAAAGCATAAGGAGTTTTCTCGTCA CATTAAAGTATTATACATGTTTATATCTGTCTTGGGATAAATGTTGAATGTTAGGTATTAAGCTTATTAGTTGCACTTTG CCAACATGATAATTACTATTGGTCCAATTGCAGCCCCTTCCCCCGCTGTCAAAATTTACTAACTCTAGCATCTGTGTGAT GTATCTTAAACATGATCATTTGCGAAGTGCAACTTGCCATCCAAACCATGGGTTAAACAAAGGTTTGAAGAGAATGTGCG AATCACATAATTGTTTTTTCGAAGAGTATAATAAAAGGACTAACATAGCTTATTGTGTTTGTTCCTGATTAAAACCATGG CTATTGAGTCGAGATTCGAATCATGAATTGAATCTTTTTATGCATCATAAGATACACGAAACAAAAAAAAAAGTCACAAA TTGAAATGTAAGCTTATATATCACAATAGTAAGCTTCAAAATAATCCAAGATCCAACTCATCCAAGCCATAAATCAAAAT GAGAACAAAAACTTTGGGTAGCTGTCGAAGTTCAAGTGTTCAATTAGCTGAAAAAAACATTGATGCTTCACCCCAACAAC TATGTATGTGAACTCTACTTGCACTTAACTAAAAGCCTATGGGTGGAACACTCACAAGCAGGTATTTGTTTGAATGAATT ATAAATAGAGCTATTGACATGAAGAACTCACTATATTAATTTAGATTGATTGACATAGTCATTTGCAGAATATACTTGCA AATAAATTGTGAAAGCATAATGAAAAAGGCGTTTAGTGTTGTCAAATAATTTAGTTAAAGTGTTGAAAAAGTCGGTGTGT GAATATTTCTACAGGATGACCAAGTGCTCAACTGCTCAGTATTAATGTATATAGAAAGGCTGTGGTGGGGACGACTTTCT TACTGACAGTGAGAGAAATAAAGAGAAAAAGAACTTTAACTAACGTCTTTTTTGCTAGTGTTCCTGAGAAGTCTAGTATA TCAAAATTATAGTGGTTCCTTGTAAAAAATAATAGGTATAAAGCTTTCTCGAGATAACGAGATTACAAGACAAGTTAGTT TTGGAGACGTAAAAGATAATTGCTTATTTCAGAGTAAGTCATGTGGAACATGTCAGAGTGATTGTCAACCCAATAATTTG ATAAGAAAGCGCACTCTCTCCAATCAAGAAGCTTGAGAGTTATTTTTGCTTGACAATTTGCATTAGATGAAACACCTACT ACACTTTCTCCTGAAATATTAGAGATTGCAAAATTTATCTACCAAATAATTCTTGTACTGTGCCTTGTTATCTTATTTTG GAACTGATGATTTGATTATGAATCTCATTGGTAATGGACTGATAAATGGGAGCGACCAAACCATTTTGGATAAACTTGAA GACCAATTTCTAATAGAGACGCGTGGTCTAATGAGGGGCATGACTTGTCATCTTGCAAAGAGTAATAAGTAAATGATAAA ATGTAAAAAAGTTTGTCAAAGATACCTACTTGCGGGAATTAGTAGATTATTTGGAAGTGGTTTCTTTGGTAGACAACATT ATAGAAGATATCTAAGAGGGAACATCATCTTCTATACACGATACACGATTGTCCACTTAATTTTTAGATGGTAACAACAT TAGTAGTATTTTTTTTCCAAGGTGCTTTTAAGAGAGATGAATGCTCTAACTTTACTCAATATAGTCAATAACTGTGGATT AAGTTATTTGCCAAAGTCACTATCTAACTTGAGACCCCTTATTTTCTTACTGCTCATGAGGGGTGACTCATAGGAATTTA TGCCTCCACCGGGAGAGCTAAAAGCACTATCAAGATTGGATACTCATATTGTTCAATTGTTAAAACTACAACGTATTGAT CTGATTATCACGTTCCTGAAAGCTTCATGGAATAATTCGGCTGTTCAAGGTTCATCGTTGAATTTGTATTTTTGATCAAT TTTAGTCTAAAGCCATCTTCCAACTGTATACTACAGATAAAAAATGCATTGACATGAGTAACACAAATTAATTTCAGAAT GACTGGTTGTTAACTATACGCCCATTTTATGTTCTACTGAGTGTCCTCAGTACTGTGACTACATTTTCTCTAGATAGGCA CACTGACACCCCTTCTGTTGATTTGTGATATTATTTATAACTAACTGTTTGTTGCAATGGATAGGTTTGATTATTTCTTG TTAGAAATATAATATAAACCATTCATGTGACCCTTACCCAACAACTTAAGCTTTTGGGATAATTGGTTATTTGACATTGT ATCAGAGCCTCTATGACCAAAAGGTCTAGAGTTTGATCCTTGCCGCCCCCCATTTTCTAATAAAATGTGGAATTTCAGCA CATGGTAGGTGGGCCTGTGAATTATCCACGCTTCACAGCCCAAGTGGGCTCTTGCGTGAGGGGGCGTGTTAGAAATATTA TATATTAAATTATTCACGTGACCCTTACCCAACAGCTTAATCTTTTGGGATAATTGGTTATCTGACATTATTTTTTAATA AGCATCTTGATATTTTATATAACTTACTTGAGTACTCCTTAGTTTCTGGTCGGGTGGCCTGTCATTCATGAAATGTCCTT AGCATCACATTTCTGACCAAGGTGTTCAAATTTGATCTTAACTAATCAGCTGCACCTTGCCTAAGCTTGAACAACCTGTG TGATTAGGGTCTCAGGGCTGCAAAATATTAAACAAATTGTAGTAGAACTACAAAAATAAGCGTATTTTGTCTTCCTTGCC TATTTTCCAATCAAAGATGAAACTGTTGACCATTCTCTACATAGTTCTTGAAGAACTAAAGTTGATGCTAGCCCATGTTT ATGATGGCAGGTGAATCAAATTACGATGATTCTAGTCATCTGGTGTATCAATTGCAAAAATTACTTAATTTTGAACTGGT AGAGGATGCAATTTAACTTTAACCAATAAATCAGTTTTGCCATACACAATCCACCCTACCTACTTAATTCATATTTTAGA ATCTAGATTTTTCATAGATATATTGTACTCGTTGCTTTTCATGGTTGGGATTCAGAAGACCAGCCTTCTAATTTTAAGCC ATACATGATATTAAATCTTAGAAGTAATTTATTAACAAGTTCTAAATATTTAGTAAATTAATGAAAAATAACAAGAAGAA TTGTTAGTGTGGTAATCCTGTAATATATTAGATTCTTCTACTTTAGTTGTCGAATATATTAATGTATTAACTGGGAAGCT GGTCTAACTATCCTGCTCATATTTATGGGGATCAACTGATAGTAGTTACCCAAGACCAAGAAACTAGAAATATAGAAATC CACTACACATGAGATTTTAATCCTATTCTTTCCGTGTACGGTGTACCTGTTGGTTCTTGACATGTATAAAATGAGAGTTA AAAATGTATGTTCTTTTGCAGATGATGAGGTATTCATAATCAAAAGTATGACACATAAAGAAATCAATGCGGTTATAAAG GTCAGATTCTGTTATTTGATGACTATTGCTTGATGCTTTTCTGTATATGAACTCGATTGGTATGGGAGCAACTGAAAACT TAATTAGTTTATTCACATTCCTTGAACAACCTTTTATGGCAGACTGTACGAAATCCAGTCTATCTCTTCCAAGGTATTGT ACTACGTCGAGGTGCCAAAGGAACTGGAATGAAATCTGTTGAATTAGCGCTCTCCATGTGCGATGTTGTTGATATATATG GTTTCACTGTTGACCCAGGATACAGTCTATGGTGGGTTTCTCTATTTGGATTTTGATTTTTTTCATATATTCTAATCTAC ATCAGTGTGCCGTTTGAAATATATTCCTGGGGTTTGTGCTCTTCAATAGAAACCTCCATTGACTCCAAATCTTCAATTTT ATAAATTTACATGAAAGGCTGTGATGCTGATTCCAACAATTATTTTACCTTCTCTTAATCATTTTTCCCCTGTAGGACAA GATACTTCACTGCTCCCAGGAAGGGACACAATCCACTTCAAGGAAGAGCATACTACCAACTTCTAGAATGTCTTGGGGTA TTTATCTGAATTATAAATTTCCACATAAATTGCACTTTACATGTATTTTTTGTTGTTGTTATTGACATTAGGTTTTATTG TCAGGTAATCAGGATTCACTCCCCCATGAGATCTAAGAGGAGGCAAGACTGGTCAGATGTGCCTAGTAGTGAAATGATAA GTCAAGCACATGCAGCCGCTTTGCGCTTGAAAAAGAGTCCAGCTGCTCAGCTCGGGCAGTTCGGCAATTGTAAGGTGTGG GGCAACGTGGACCCGGACAAAAGTGGACCTATCTCGGGATCACCAGACATGAGTGATGTCAGGAAGTATTCAAATTACAG TAAATGGGAAGTCATGCCTATTGAGAGTTTGAGGAAAGATGCACAGGATCACTATAAGCAGATGCAAGGGGTGTCTATAT ATAAATTGGACGGCAATAGGTTGGATGACCTAGTATGTGTAAGACATTCCTTAAAATCTGATGTGTAAATGGTGTCTTTG CGGTCTATTGTTATTCACTGATTACGTCTACCGCCTTCTGAATGGAATCTGAGATAAAATTTCCCACGGCGGGCTGCTGA CACATAGCTCGTCAAGCAGTTACTGGTTTATCGCATACCCCATCTATCAGAGGATGGCAAGAATCTCAACTCCATTGAGG GAAGATGACGGAGTCAATGTGTGTAATTTCATTGTTCCGGATGATTTATATTTCAAGGTAGAGATGTAGAAATCGCAATA TAGGAATTCTGACCACAGAAATTTGTTGTGCCTCTTTTTCCAGGTTTAAATTGACAGTGATTATTCATTAGTATAATAGA TGTGTCTATCTACTGTAACGTATCAATTGGTTGAAGAAGTCTCTGCAGTAAACTGTTTTCCTTTTATGTGATGATCAGAA GAGCCTATAAAGGAGGAAAGTGATAGTCAAACGTTTTGTTAACTGGTTTTCACATGATTGTTAATGGTATTTTGTTGCTG AGTTTTTTTTTCTTTGCTTATTTTGTCTCTCTTGGGATAATCTAATGAAACTATATGGAAGAAATTAAATTTCAGAGCAC AATTATCATTTGAAATTAGATTTACTGTGCTGCTTACAACTGGCTATACCAAATCCTCTCTCCGATATGGAAGAAAAAAA ATCAACCTG
CDS sequence (LotjaGi1g1v0632600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGACAGCAGAAGCAGGTGAACAGCAACAACCATAGCAGGCAACCGAGGATCCTATATTTGGTGTTTGCCGCTGCACT CTTCTCCCTCATCCTCTTCGCTATCCAATCTTCTTTCTTCTCTGGCTCCCTCTACTCAGATCGTAACTCTGAGACAATTC GTATCTTGTCCCAGTTTCAGTCCTCTCTTCAGCAATGTGTCGCGAATAGGGGGCTTGGACTCACTGCACATATTATTGAC CATTGTACGTTGATCCTTAAATTCCCTAAAGGCACCAACAGCACTTGGTATAATGCGCAGTTTAAAAAGTTTGAGCCTTT GGAGTTCCAGTATGATGTTTGTGAGGCAATCATATTGTGGGAACAGTACCGTAACATGACTACGGTGTTGACCAGAGAGT ATCTTGATACTCGTCCTGATGGTTGGTTAAAGTATGCTCCAAAAAGGATAGCACAAGTAGGGGTAAAGAAGTGCACTAAT AGGACTATTTGTGAAGAGAACCTCAATATATTATTACCTGCAAAACCCCCCTTTCATCCGCGGCAGTTTCGTACTTGTGC TGTTGTTGGAAATTCTGGGGACCTTCTGAAGACAGAATTTGGAGAAGAAATTGATAGTCATGATGCTGTTTTTCGAGAAA ATGAGGCCCCTGTTAATCAGAAATATGCCAAGCATGTTGGTCTTAAGAGGGATTTCCGTCTAGTTGTAAGAGGTTCTGCT GTTAACATGGTCCCTATTCTAAATGGTTCTGATGATGAGGTATTCATAATCAAAAGTATGACACATAAAGAAATCAATGC GGTTATAAAGACTGTACGAAATCCAGTCTATCTCTTCCAAGGTATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGA AATCTGTTGAATTAGCGCTCTCCATGTGCGATGTTGTTGATATATATGGTTTCACTGTTGACCCAGGATACAGTCTATGG ACAAGATACTTCACTGCTCCCAGGAAGGGACACAATCCACTTCAAGGAAGAGCATACTACCAACTTCTAGAATGTCTTGG GGTAATCAGGATTCACTCCCCCATGAGATCTAAGAGGAGGCAAGACTGGTCAGATGTGCCTAGTAGTGAAATGATAAGTC AAGCACATGCAGCCGCTTTGCGCTTGAAAAAGAGTCCAGCTGCTCAGCTCGGGCAGTTCGGCAATTGTAAGGTGTGGGGC AACGTGGACCCGGACAAAAGTGGACCTATCTCGGGATCACCAGACATGAGTGATGTCAGGAAGTATTCAAATTACAGTAA ATGGGAAGTCATGCCTATTGAGAGTTTGAGGAAAGATGCACAGGATCACTATAAGCAGATGCAAGGGGTGTCTATATATA AATTGGACGGCAATAGGTTGGATGACCTAGTATGTGTAAGACATTCCTTAAAATCTGATGTGTAA
Protein sequence (LotjaGi1g1v0632600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRQQKQVNSNNHSRQPRILYLVFAAALFSLILFAIQSSFFSGSLYSDRNSETIRILSQFQSSLQQCVANRGLGLTAHIID HCTLILKFPKGTNSTWYNAQFKKFEPLEFQYDVCEAIILWEQYRNMTTVLTREYLDTRPDGWLKYAPKRIAQVGVKKCTN RTICEENLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGEEIDSHDAVFRENEAPVNQKYAKHVGLKRDFRLVVRGSA VNMVPILNGSDDEVFIIKSMTHKEINAVIKTVRNPVYLFQGIVLRRGAKGTGMKSVELALSMCDVVDIYGFTVDPGYSLW TRYFTAPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRRQDWSDVPSSEMISQAHAAALRLKKSPAAQLGQFGNCKVWG NVDPDKSGPISGSPDMSDVRKYSNYSKWEVMPIESLRKDAQDHYKQMQGVSIYKLDGNRLDDLVCVRHSLKSDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 472 | 472 | 4.2E-272 | – | |
| TMHMM | 17 | 39 | 23 | - | – | |
| Phobius | 20 | 40 | 21 | - | – | |
| Phobius | 41 | 474 | 434 | - | – | |
| Gene3D | 99 | 354 | 256 | 4.4E-30 | ||
| Pfam | 155 | 242 | 88 | 2.4E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein glycosylation | A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins. | ||
| Molecular function | Sialyltransferase activity | Catalysis of the transfer of sialic acid to an acceptor molecule, typically the terminal portions of the sialylated glycolipids (gangliosides) or to the N- or O-linked sugar chains of glycoproteins. |
Expression pattern of LotjaGi1g1v0632600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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