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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0635500 |
| Transcript ID | LotjaGi1g1v0635500.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier-like protein; TAIR: AT5G51050.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q5XHA0|SCMC1_XENTR Calcium-binding mitochondrial carrier protein SCaMC-1; TrEMBL-Plants: tr|I1N833|I1N833_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0635500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:119037954..119041651) extracted from Lotus japonicus Gifu genome v1.2.
CAAATCTCAATTTTTTTTTTCCAAACTCCAAACTTCTGTGAATCTCACACACTGTCCAATTCATTACGATCACATTCTTC ACATTTATTTATTATTATTATTCTCTTGTTTTGTGTGCCCGATATCGAACCTTCTTTTCTGCGATGACGACGTGCTCGTT CTCCACCGTCGCCGGCGACCCCTTTCACCGTCGCCGGCCATAATCTCCGGCGTAACCTTCACACCTTCAATCTCCCCCTT TCCACGTTCCCGTTCGTTACCACGCTTCGTTTGATTCCCAACCCAGATCGCAGAAAAAAGTTGAACAAGAATATGCTTCC TCTTATTCGATCCCTCTCGATAATGCTACTTTATCACTCACACTAGCGTTGTGGGAATCAATCCCAAGAGCGTTCGTGCG TTCAATCTCTTTCCATAACTACCACTTTTGATCGATTGCGAAAGCTTTTTTCATCGATGGGGTTGACGGCGAAGAAGGAG AAGGAGAAGGGGTGTTGCAACCCGGTGAAGAAAGCGGGGCCGGTGACGATGGATCATGTGTTGTTGGCATCGCAGGAGAC GAAGGAGGAGAGGGAGATCAGGATTCAAGGAATTTTCGGTTTCTTCGATAAGGAGAATCGTGGGTATTTGGAGTATGAGC ATATTGAGGTTGGTCTCTCTGCTCTTCAGATTCCGGCTGAGTATAAGTACGCTTCGGATTTGTTGAATGCTTGTGACAGG AACAAGGATGGGCGTGTTGATTATGTGGAGTTCAAGAGGTATATGGATGATAAGGAGTTGGAGCTTTACCGCATTTTCCA GGCCATTGATGTTGAGCATAATGGCTGCATTGTGCCTGAGGAGCTCTGGGAGGCACTTGTAAGAGCAGGCATGTCTTGTC TTGTTTACAATCCTGTTTCCAATTTCTTAGATGTTTGATTGTTTTGCTTTTCTATTTGTTTCGGTTTATGTTTCCGGGTA GGTTAGTTTGAGAAAGAATTAAGAAAGGGAGGGTGCTATGGTTAGAGTTGCTGCCGTGTGATTAGGAGATAATGTATTCG AGTCGTGAAATCAGTCTCTTGCAAATGTGAGGTAAGACTGCCGATAGTAAATCCATAATCTGAATCATGTCGTGGTGGGA GCTTTGAAGTACGAAGCTAGTTTGAGAAAGAATTATGTGTAGTAAGTAGTAAGGAATAATCTAGGTAGGCTAGGTGGAAT GTGAGTTTAATCAACACTAATTTGTGCTTGCCTTGGTTTTAGTTGTTGGGATGGTTGAAATGGTCTTGCTTCGCGCAGTT GCAGGCTGGTTTGTTTTCCCTTGCTAAATTTGGACACTTGGCTAAGTATATTCTCTTACTGGTATTAACTTAAGAGAAGA CATGATTACATTTTCAGATGGAGTGGTGAGAACTAAAAACATTGCACGTATTGGTTGGTGCGTTCCTTCTCGTTGGAAGC AATTCATATAGAAAAATTGCTTACCTGTGAAGGCTCCAGTTGCATTGTGGAAAGAAAGTGAAGGGAAAGCGAAAACCATC TTGTTAAAGCATTCTTCTCTTACATGTAGCCCTACTTATTATGTGATTTACCTGTTTTTAGGTTCTTTCTGTCAGTAGTA GTCTTCACTGTGTTCAGTAACATAACCTGATGTCAAATTTCAAAGTACACAGATAGTATTTATCAATTGCTCTGTGGAAC TTTATTTCTAAAATTCTACTTTGCCTTTTGTTTTCGTCTTCCATGATTAAACGAGATCACTTACATGTTGCGAATGTTGA AATTAGATTTTCTTGATTTTATGATGCACTTTGATGGCTGTTTCATTCTATAAGTCACGCCACTCTCTCTATTGCAGGGA TTAAGATTGATGACGAGGAACTCGCTCGTTTTGTTGAGCGTGTTGATAAGGATAATAATGGTGTGATAACATTCGAGGAA TGGAGGGATTTTCTGCTGCTTTATCCTCACGAAGCAACCATTGAGAACATTTACCATTATTTGGAGCGGTTATGCATAGT AGATATTGGGGAACAAACTGTTATTCCTGCTGGTGTTGCTAAACACGTTCATGCAAGCAGGTATTTAATCGCAGGAGGAG TCGCAGGTGCAGCGTCACGCACAGCAACTGCACCCCTTGATCGTTTAAAGGTTAAATTGCAAGTCCAAACGACACGAGCT CAAATAATGCCTGCAGTAAAAAATATATGGAAAGAAGGTGGCTTCTTAGGATTTTTTCGAGGCAATGGCTTAAATGTTAT GAAGGTGGCCCCAGAAAGTGCCATTAAATTTTATACCTATGAGATGCTGAAGACTTTTATTGTGAATGCTAAAGGAGAAG AGGCAAAGGCTGATGTTGGAGCTATGGGGAGACTGCTAGCCGGTGGTTCAGCTGGTGCTATAGCTCAAACTGCAATATAT CCAATGGATCTTGTCAAAACACGACTACAAACTCATGCATGTACTAGTGGAAGAGTACCTAGTCTTGGAACCCTTTCAAA AGATATATGGGTTCATGAAGGACCCCGGGCTTTTTATAGGGGACTGATTCCTTCTCTTCTTGGGATTATTCCATATGCTG GCATAGATCTTGCTGCATATGAAACCTTCAAGGATATGTCAAAAAAGTATATGCTTCATGATGAAGGTAAAAAGTGATAA ATTTAATTTTTTGTTATCTTCTGTATCAGATATTGCCATAGTTGCGTGCTTAAATTCTGCTGCTTTCTGTAGAACCTGGC CCTGTAGTACAGTTAGGATGTGGGACAGTATCAGGAGCTCTTGGAGCAACATGTGTTTATCCATTACAGGTCATTAGAAC AAGGTAAGTTTTGGATGTAAAATGTCCAAGTTGTTTCTTAAACATCTAGTAATTTCAACCATTTTGGCTTTCTATCAAAA TCAGAAAGTGAAACAGATCTTGATTTCAGAATGCAGGCTCAGCGCTCTACTAATGGAATGGCTGACGTATTCAGGAAAAC CTTGGAAAATGAAGGATTCAGGGGGTTCTACAAAGGAATATTTCCTAACATGCTCAAAGTAGTACCATCAGCAAGTATCA CTTACTTGGTTTATGAGTCTATGAAAAAAAGTTTGGATTTGGAATGAGGAAATTCGCCGCTTCATTTCATAATTAGTCCT GGTGACATGGCTGACCATTGGCAACTGTTGGAAGTGGTTTTGCAATGAAGATGTTGATGAAAAGAATAATGTTTACAATT GATTATTGTGACAATTGTCTAAATTCATTCTTATATAAATAACATTACTTTCTTCAAAATTCTTGGGCGGACAAAATTGG TTTGTCCTGCCTGGTGCTTCATCAAACTAATATGAAGCTTTATATCCATTAGCAGATTTTGTTGTATGATAGAGATGCAT ACAAAACACAGTTAGGATCCAATTTTGTAAACTGTAATATATAATAATTAGTGGCTTAGATTGATCATCTAACTCTTAAA ATTGATCATCCTATTTGTTCTATTTCTCCAGCTTCCTTTATTTGCTTGATGACTTCATTAGAAATTTTCTGGTATCTTAG TCTTTATGTCATTCTGATTTTGATTTTGTTGTATGATAGAGATGCATACAAAACACAGTTAGGATCCAATTTTGTAAACT GTAATATATAATAATTAGTGGCTTAGATTGATCATCTAACTCTTAAAATTGATCATCCTATTTGTTCTATTTCTCCAGCT TCCTTTATTTGCTTGATG
CDS sequence (LotjaGi1g1v0635500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGTTGACGGCGAAGAAGGAGAAGGAGAAGGGGTGTTGCAACCCGGTGAAGAAAGCGGGGCCGGTGACGATGGATCA TGTGTTGTTGGCATCGCAGGAGACGAAGGAGGAGAGGGAGATCAGGATTCAAGGAATTTTCGGTTTCTTCGATAAGGAGA ATCGTGGGTATTTGGAGTATGAGCATATTGAGGTTGGTCTCTCTGCTCTTCAGATTCCGGCTGAGTATAAGTACGCTTCG GATTTGTTGAATGCTTGTGACAGGAACAAGGATGGGCGTGTTGATTATGTGGAGTTCAAGAGGTATATGGATGATAAGGA GTTGGAGCTTTACCGCATTTTCCAGGCCATTGATGTTGAGCATAATGGCTGCATTGTGCCTGAGGAGCTCTGGGAGGCAC TTGTAAGAGCAGGGATTAAGATTGATGACGAGGAACTCGCTCGTTTTGTTGAGCGTGTTGATAAGGATAATAATGGTGTG ATAACATTCGAGGAATGGAGGGATTTTCTGCTGCTTTATCCTCACGAAGCAACCATTGAGAACATTTACCATTATTTGGA GCGGTTATGCATAGTAGATATTGGGGAACAAACTGTTATTCCTGCTGGTGTTGCTAAACACGTTCATGCAAGCAGGTATT TAATCGCAGGAGGAGTCGCAGGTGCAGCGTCACGCACAGCAACTGCACCCCTTGATCGTTTAAAGGTTAAATTGCAAGTC CAAACGACACGAGCTCAAATAATGCCTGCAGTAAAAAATATATGGAAAGAAGGTGGCTTCTTAGGATTTTTTCGAGGCAA TGGCTTAAATGTTATGAAGGTGGCCCCAGAAAGTGCCATTAAATTTTATACCTATGAGATGCTGAAGACTTTTATTGTGA ATGCTAAAGGAGAAGAGGCAAAGGCTGATGTTGGAGCTATGGGGAGACTGCTAGCCGGTGGTTCAGCTGGTGCTATAGCT CAAACTGCAATATATCCAATGGATCTTGTCAAAACACGACTACAAACTCATGCATGTACTAGTGGAAGAGTACCTAGTCT TGGAACCCTTTCAAAAGATATATGGGTTCATGAAGGACCCCGGGCTTTTTATAGGGGACTGATTCCTTCTCTTCTTGGGA TTATTCCATATGCTGGCATAGATCTTGCTGCATATGAAACCTTCAAGGATATGTCAAAAAAGTATATGCTTCATGATGAA GAACCTGGCCCTGTAGTACAGTTAGGATGTGGGACAGTATCAGGAGCTCTTGGAGCAACATGTGTTTATCCATTACAGGT CATTAGAACAAGAATGCAGGCTCAGCGCTCTACTAATGGAATGGCTGACGTATTCAGGAAAACCTTGGAAAATGAAGGAT TCAGGGGGTTCTACAAAGGAATATTTCCTAACATGCTCAAAGTAGTACCATCAGCAAGTATCACTTACTTGGTTTATGAG TCTATGAAAAAAAGTTTGGATTTGGAATGA
Protein sequence (LotjaGi1g1v0635500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLTAKKEKEKGCCNPVKKAGPVTMDHVLLASQETKEEREIRIQGIFGFFDKENRGYLEYEHIEVGLSALQIPAEYKYAS DLLNACDRNKDGRVDYVEFKRYMDDKELELYRIFQAIDVEHNGCIVPEELWEALVRAGIKIDDEELARFVERVDKDNNGV ITFEEWRDFLLLYPHEATIENIYHYLERLCIVDIGEQTVIPAGVAKHVHASRYLIAGGVAGAASRTATAPLDRLKVKLQV QTTRAQIMPAVKNIWKEGGFLGFFRGNGLNVMKVAPESAIKFYTYEMLKTFIVNAKGEEAKADVGAMGRLLAGGSAGAIA QTAIYPMDLVKTRLQTHACTSGRVPSLGTLSKDIWVHEGPRAFYRGLIPSLLGIIPYAGIDLAAYETFKDMSKKYMLHDE EPGPVVQLGCGTVSGALGATCVYPLQVIRTRMQAQRSTNGMADVFRKTLENEGFRGFYKGIFPNMLKVVPSASITYLVYE SMKKSLDLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 361 | 361 | - | – | |
| PANTHER | 27 | 488 | 462 | 7.2E-231 | – | |
| PANTHER | 27 | 488 | 462 | 7.2E-231 | – | |
| SUPERFAMILY | 33 | 183 | 151 | 1.44E-32 | ||
| ProSiteProfiles | 38 | 73 | 36 | 7.261 | ||
| Gene3D | 41 | 118 | 78 | 5.9E-12 | – | |
| SMART | 42 | 70 | 29 | 11.0 | ||
| ProSiteProfiles | 74 | 109 | 36 | 10.106 | ||
| SMART | 78 | 106 | 29 | 2.0 | ||
| Pfam | 79 | 105 | 27 | 0.017 | – | |
| ProSitePatterns | 87 | 99 | 13 | - | ||
| Pfam | 109 | 167 | 59 | 8.4E-10 | ||
| SMART | 109 | 137 | 29 | 16.0 | ||
| CDD | 109 | 170 | 62 | 1.86071E-11 | ||
| ProSiteProfiles | 110 | 140 | 31 | 7.623 | ||
| Gene3D | 121 | 196 | 76 | 1.2E-15 | – | |
| ProSiteProfiles | 141 | 176 | 36 | 13.035 | ||
| SMART | 145 | 173 | 29 | 1.3 | ||
| ProSitePatterns | 154 | 166 | 13 | - | ||
| Gene3D | 205 | 486 | 282 | 1.4E-90 | ||
| SUPERFAMILY | 207 | 480 | 274 | 1.83E-79 | ||
| ProSiteProfiles | 208 | 291 | 84 | 19.703 | ||
| Pfam | 208 | 294 | 87 | 1.7E-24 | ||
| PRINTS | 213 | 226 | 14 | 2.2E-28 | ||
| PRINTS | 226 | 240 | 15 | 2.2E-28 | ||
| PRINTS | 266 | 286 | 21 | 2.2E-28 | ||
| Pfam | 304 | 394 | 91 | 4.0E-23 | ||
| ProSiteProfiles | 304 | 391 | 88 | 21.741 | ||
| PRINTS | 319 | 337 | 19 | 2.2E-28 | ||
| Phobius | 362 | 385 | 24 | - | – | |
| TMHMM | 363 | 385 | 23 | - | – | |
| PRINTS | 364 | 382 | 19 | 2.2E-28 | ||
| Phobius | 386 | 404 | 19 | - | – | |
| ProSiteProfiles | 402 | 485 | 84 | 24.015 | ||
| Pfam | 403 | 486 | 84 | 8.3E-24 | ||
| TMHMM | 405 | 427 | 23 | - | – | |
| Phobius | 405 | 425 | 21 | - | – | |
| PRINTS | 411 | 433 | 23 | 2.2E-28 | ||
| Phobius | 426 | 489 | 64 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0635500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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