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LotjaGi1g1v0637400.3

Overview

Field Value
Gene ID LotjaGi1g1v0637400
Transcript ID LotjaGi1g1v0637400.3
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Acetyl-coenzyme A synthetase; TAIR: AT5G36880.4 acetyl-CoA synthetase; Swiss-Prot: sp|B9DGD6|ACS_ARATH Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal; TrEMBL-Plants: tr|I1N846|I1N846_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0637400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:119253373..119259798) extracted from Lotus japonicus Gifu genome v1.2.

AGAACCAACAATTACCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCTGGTGCTGGCCACATTTCTCATCTGAACGC TGTGATTCTCGGTGAATCACTCGCCTCTGAGGAAGACGATTTCGTTCTTCCAAGCGAGGAGTTTGCAAGCCAAGCGAATG TTCAGTCCCCAGAACAGGTTTTTAGTTTTTACATTCTTCTCATTGATGTAACTTCTGAATGCTTTCTGGGTTTCAAATGG GTTGGTCTCAATTGCATAAAAATTTGATTTTTTGTTTTGTCTTTTTTTGTGCGTGATTTGTGATTTGTCAGTATGCGAAG ATGTATAAGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGATATTGCATCACAATTCTATTGGAAAAAGAGATGGGG TGATCAAGTTTTTGAGGAAAATTTGGATGTCAGGAAAGGGAATGTTAAGATTGAGGTGATTTATTTGAATTCAATTTGGA TCTTGCTTTCATTTTTTTTTTCTTATGGTAGTGTTTGTTCAAGGGTGAGTGGTGGTTGTAGTTTGTGTGTATGTGTTGAT TTGTTGCATTGCATCAGTGGTTCAAGGGTGGGATCACCAACATCTGTTATAATTGCTTGGATAGACATATTGAAGCTGGA CTAGGTGACAAAATTGCCATTTATTGGGAAGGCAATGAACTTGGTGTAGATGGTAGTTTAACATACTCTCAGCTTCTAGA TCAAGTTTGCCAGGTTTGTTCTGACTTTCTTCTGTGTTTGTCTCTTTCTCATGCAAATAAGATATTCAACCTGAGATTTC GGGTGCTAGACCGTTTTGTTTTTAAAATGGGAAAATACTAATGGAAAATACAATTTTTTTGCCAGGTTGCTAACTACCTG AAAGATGTTGGTGTGAAAAAGGGTGATGCTGTTATTGTTTATTTGCCTATGCTTATGGAGCTTCCAATCACAATGCTTGC ATGTGCCCGCATTGGTGCTGTTCATTCGGTATCTCACACAACTTTTTTTTTGTACTTGTCCACTATTTTCTTGCTTAGTC GTGTTCTCAAAATTATCAGATTGCTTAATTTGGTTCACGCTTGCCAGTTCAGTAATGCTGTTAGCTTTTTGATTGTTTAG GTTGTATTTGCCGGTTTTTCTGCAGACTCTCTTGCGCAGAGAATCATTGACTGTAAACCAAAAGTTGTAATCACTTGCAA TGCTGTTAAAAGAGGCCCTAAGGCTATCTATCTGAAAGACATAGTGGATGCTGCCATCCATCAATCTGCCCAAAGTGGGG TCTCTATAGGTGGGGAGATATCATTGATTTGCTTATACTTTATAGTTTCAACGCTATAATCTCCTCAATTAATATTATGC AGTTTAGTTTTATGTATTAGAATTCAAATGACTAGACAAAAACACACAGAGATCAGTATAGCTAATATCACATGCATCTT TTCATAGCTGATGATCAGTGACTAAATTTGAGCTTACTAGCATGAAGATAAATCAAACACTTTGTTCTAGTAAAATTACT TCTGCCTTTTGATTTAATGGTTCGTCAGTGAATTTCATAGCCTCTGCTTTTTCATTCATGTCTCTTACATTTGCCGTTTA TTTAGTGAGATATAAAGTATGTAACTAGGACTGTGAGTCCCATATCAGTTGGGTGTGAGACAACTATTAAGTTTGTTGAT AGTTTGAGAAAGTGTCCTATGACTTTTTAAGTCTTTTTCCTATCATCATTCCATACTGATTTTTGAAGTTCTTGACCACT AAAGAGTGGGCTGGTATGTTATTAAGTATTAACCTTCTGCATTTGGTGCTTGTGTCCAACGCATTTAACATGTTTCACTT TCACTATGTAACAGACTTTCCCAACTGAAGTGAGCAATAGAATTATCTCTAATGTGTGTGCACATGTATATGCTATCACC AAATTCATCCATAATATGTCATGTCATCATATCTTCTTGACCTTTTTCTTTGCACTTTTGGGTCTAATCAGATGTATGCC TAACTTATGAAAATCCGTACGCAATGAAGAGGGAAGATACCAAATGGAAGGAAGGGAGGGATATATGGTGGCAGGTTAGT ATATGAAAGTTTTTCCCCTTTGCATATATACTCTTACTGTGTCACGTCACATGGTTATCTAACTATACCAGTAGTAACAT GAGTTCTGCAAAATGCTTACGTGCCTGCTGAGGATTAGTTATAACATAAGTTTAGTTTGGATTTCTTTAGCCATTTTGAA CAGATTGATTTGTTTCTGATTATAAGTTCGCTATGAATCTCCAAATATTTTATATTCATGGTTATTGCTTCTATAATCAT ATAGAAGTTCACAGTTCACACCCTTTTTCCTTTTTGGCTACTTTTTTGTTGTTTTGCAGGATGTCATTCCTCGATATCCA AATACTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAA GGTATTTGGGTGCTGTTATTGCTGTAATTGGAGTTATATTTCCTTTTACTTCATCTCTTTACTCAGCGCTGCTGCTTCTA ACATATGTTTCTAAAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTTAAGTATGCATTT GACTACAAGCCGTCCGACATTTTCTGGTATGCTTGAAAGTTTATCTTCTATTTTTTTTGTTCTTTTTATCTTTTAAATGT TCTTGATGAAAACTGGATCAGGATTCTTATTTAACTCCTTTATTCGCTTAATACAGGTGTACAGCTGATTGTGGTTGGAT TACTGGGCACAGTTATGTAACTTACGGACCCATGCTCAATGGTGCAACTAATATTGTGTTTGAAGGGGTAATAAATTTCA ACTTCAATATAGTGTAATAATTTATATGCGTGATAGAAAAAATGAATCGAAGAGAAATATTACTAGTGCACCCTTACCAG AAAGAATAATTCGATCATGCATATATATTTGTAGAATTTAACTATCCTATAAATTGGTTGGCCTTATGATAAGACTGATA GAAGCCACAATTCTATCAATTTATGTTGAGGGAGACCATGGAAACTCTTAGTAAAACCATTTAAAGGTCTTTAATCTAAA TGGCCTGTCTGAACTCTTGGTTTTTGATCGACCACTCTGGCACCGTTTCATCCATGTTGGTAACTTCACCTAGTTCGGAA AATGCTTTGATTGTTGCTTCTTGTTGGTTGGGAATTTTAAAAACAAATCTGTTACACCAAATGAAAATGATATTATATAG GTCTTTAAGAAATGATATTAACTGTTTGAGCTCACAGAATTGTTAGTTTGTTACTGAACAGACAAAACGAAAATGCACTG TCACTAAATATTCACTGACTAGCCACTTGGGCTTACCAGTTACCACAAGTTGTAAGGGTGTCAATAGCGCGCTATGGTGG CGCTATAGCACAGTAGCATCCCTTGGCCACTCCTAGTTGTTGCGTAGCAGTGCAGTTCAGAGTAGCGGCCGTTAAAACGG AAGAAATAGCAGCCACAGCGGCGCTATTTGGCTGCTATTTGGTGGAATGGATAAAAACTAAAAAACAACCCACAAAAAGT TCAAGTTAGGGCATTTTGGGGAGGTGTTTCAGGGTTTTTTCTTCGGAAACATACTGAGAACGGTCTAGTTTGAGGAGGAT GAGGACGAAGTGAAATAGAGCTTTCATGTTTTTAGGCAGTTTAGTTTATTGAATAGAGACTTAAACCTCTTGGTTACCTT GACTTTTGTTGGTACTAGTATGTTTTGTTTGAGACCTATTTTTTTGAGCATTTTTAACTATACAAAAAATTCAGCATAGC GGCCATCCTGCTTATGCGCTATGCCTCAATAGCATTTTTGTGGTCAGTCGCAACGCGCCGCTATCCGTGATTGACTACAC TCTAGTGGTGAAACTCTTTTTCCTGTGAAATTGAACTTGTAATGTTTCCTTAAAAGATATTTACTTTTTATATGAAAGGA CTGTTGTTTAGGTGATATAAAGAATTTCAGGGGCCTCATTCAAAAGAGGTCAACAATTTATGCCCGATCTGTTGGTTGAC TACGCTAAAGCTGAGTATTGGAGATACACAAAAATTGAATTGGCAACATATTTGCAGGATTTATGAATATATTTATTTCC ACCATCATCATTTTATTAATTTGGTGTTTTTGAGTTAATAGATAGAAAATTATGGGTGTCAAGGAATTGCAAAGAAATAC TTTGCTTTAAATGTGATAAAATGAGTGCAGGCACCCAATTATCCGGATGCTGGTCGTTCTTGGGACATTGTTGACAAATA TAAAGTTTCAATATTTTACACTGCCCCCACATTGGTCCGGTCCCTCATGCGCGAAGGTGATGGGGTAAGATACCACTATG CTTATAAGTTTACTGTAACACTGTTTTAAAAAGTTATTTGTGATTGTGAAAAAAAATGCTTCTTCACGCACTATTGCTAA CAGACGCCCCTGCACATCTTGTCTCTTTTGGCCTTCTACTTTCCATTTTACAAATTAGTATCAAATTGAAGATCAGAGAC TCTTAATATTGTTGCAATTTCAATTTTCAAAGAAGTAACCTGTTAATTGTACTTTATCAGTTATAGTATCAGGCATTAGG TTGATGCTTTTGTTTTTATTGAAATAAGATACATTATATGATACAGGAGTTGGGCAAGGTTTTTTTTCGAGTTCTTAACT TCATTGTGTATGATGTCAAAACAGGACTGAGAGAGTATTAGGTTGATTTGCTGTCCATATAGTCCCCCCCCCCCCCAACA AAATAAAAATCCATCCTGCATTTATGATGCAGGCATAACAAACTTTGGTGTCAAATGATAGAAAAAGGGAATTCTGTTGG ATGCATAAGTTTAGAGTTCCATATGTTGTTGTTTTCATTATTGTTCATTAAAGAATTGAAATTTTTGCAGCTTGTTACTC GCTACTCAAGGAAATCTTTACGAGTCCTTGGAAGTGTTGGTGAGCCCATAAATCCAAGTGCATGGAGGTAAGGAGGTTAT TTATTTCTTTATCTATGCTTGGTGATTACAGCTTAATTTCCTATATCAAGGAACATTCTGATGCATTCTTTGATCTTTCT CTTTCAGGTGGTTTTACAACGTAGTAGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACCGGTGGT TTCATGGTAATTTAATATCCAATAGTTTTCTGGGTCAAATATTGATTCTAATAGCAGGCACTGAACAAGTAATGTAGGTG TTTTCATTAGAGACATACGACAATTAATCTGCTATGAGCCATTATGCACAGCTGAAGTGGTAATAGAGAGTTAGGACTGT AGGGTTTTATATGGAAGTCTTAGGTGTGTTTGTGTGTGTGTGTGTGTGCGTGTTCGAGAGAGAGAGAGAGAGAGATCATA TATGTGCGTCTATGTCTTTGGAACTTAAATTCTTCATTGTTGCTTGTAGATAACTCCACTACCAGGTGCTTGGCCCCAGA AGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGGTCTTTATATGTTCATTTTATAATTTAGTGAACTTGTTGATC TCTTTGCTATTATTTCACTATGCCTTTATCACTTACAAATTTTGTTGTTACTGTAGCCTGTCATAGTGGATGAGAAAGGT GATGAAATAGAAGGCGAGTGCAGTGGTTATTTGTGTGTTAAAGGATCATGGCCCGGGGCTTTCAGAACTCTCTATGGTGA TCATGAAAGATACGAAACAACATATTTCAAGCCATTTGCTGGCTACTATTTCAGTGGTGATGGCTGCAGCAGGTTAGTGA TTTACTAAAATTAGATTTTCATAATTTGCCAATTTCCAGGATTCATGTACAATATCTCTGAATTTTAGTCTGTGTAATTT ATATTTCGGCACTCTAATTCATAAACAGGAAATACCATTAAACGCAAAAATGTGTGGGATAATTATGTTCTACGGGTTTA ACTATATTTCAGGGATAAAGACGGATACCATTGGCTCACTGGAAGAGTTGACGATGTCATCAATGTCAGGTATTCTTGGA ATTTTAAAAGCTCTTTCTGATGATTCGTGTCCTACAATTTCTTTCTTTATAGGTACAAGCATGTAAACATGAACACAGAC TGGTTGTACCATTCATAAAGTTCTAGTTCTAGTTGATGTTGAAAACTAATATATAGTCTTGTTACATGCAGTGGGCATCG TATTGGCACAGCTGAAGTGGAATCAGCTTTAGTCTCACATCCTCAATGCGCAGAGGCCGCTGTGGTTGGTGTGGAGCATG AGGTATAGCTATATAATGTTCTCTCCTCGTGGGAGTCAACATCGACTGTGATTTTGTGTTATGTGAAAGAAACTAAGTAG AGTTTCTGTATAGCATAATCATGTGA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0637400.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGCTTCTTCCATCTGGTGCTGGCCACATTTCTCATCTGAACGCTGTGATTCTCGGTGAATCACTCGCCTCTGAGGA AGACGATTTCGTTCTTCCAAGCGAGGAGTTTGCAAGCCAAGCGAATGTTCAGTCCCCAGAACAGTATGCGAAGATGTATA AGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGATATTGCATCACAATTCTATTGGAAAAAGAGATGGGGTGATCAA GTTTTTGAGGAAAATTTGGATGTCAGGAAAGGGAATGTTAAGATTGAGTGGTTCAAGGGTGGGATCACCAACATCTGTTA TAATTGCTTGGATAGACATATTGAAGCTGGACTAGGTGACAAAATTGCCATTTATTGGGAAGGCAATGAACTTGGTGTAG ATGGTAGTTTAACATACTCTCAGCTTCTAGATCAAGTTTGCCAGGTTGCTAACTACCTGAAAGATGTTGGTGTGAAAAAG GGTGATGCTGTTATTGTTTATTTGCCTATGCTTATGGAGCTTCCAATCACAATGCTTGCATGTGCCCGCATTGGTGCTGT TCATTCGGTTGTATTTGCCGGTTTTTCTGCAGACTCTCTTGCGCAGAGAATCATTGACTGTAAACCAAAAGTTGTAATCA CTTGCAATGCTGTTAAAAGAGGCCCTAAGGCTATCTATCTGAAAGACATAGTGGATGCTGCCATCCATCAATCTGCCCAA AGTGGGGTCTCTATAGATGTATGCCTAACTTATGAAAATCCGTACGCAATGAAGAGGGAAGATACCAAATGGAAGGAAGG GAGGGATATATGGTGGCAGGATGTCATTCCTCGATATCCAAATACTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCAC TTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACT GCAACAACATTTAAGTATGCATTTGACTACAAGCCGTCCGACATTTTCTGGTGTACAGCTGATTGTGGTTGGATTACTGG GCACAGTTATGTAACTTACGGACCCATGCTCAATGGTGCAACTAATATTGTGTTTGAAGGGGCACCCAATTATCCGGATG CTGGTCGTTCTTGGGACATTGTTGACAAATATAAAGTTTCAATATTTTACACTGCCCCCACATTGGTCCGGTCCCTCATG CGCGAAGGTGATGGGCTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTTGGAAGTGTTGGTGAGCCCATAAATCC AAGTGCATGGAGGTGGTTTTACAACGTAGTAGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACCG GTGGTTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAG CCTGTCATAGTGGATGAGAAAGGTGATGAAATAGAAGGCGAGTGCAGTGGTTATTTGTGTGTTAAAGGATCATGGCCCGG GGCTTTCAGAACTCTCTATGGTGATCATGAAAGATACGAAACAACATATTTCAAGCCATTTGCTGGCTACTATTTCAGTG GTGATGGCTGCAGCAGGGATAAAGACGGATACCATTGGCTCACTGGAAGAGTTGACGATGTCATCAATGTCAGTGGGCAT CGTATTGGCACAGCTGAAGTGGAATCAGCTTTAGTCTCACATCCTCAATGCGCAGAGGCCGCTGTGGTTGGTGTGGAGCA TGAGCTAAGTAGAGTTTCTGTATAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0637400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKLLPSGAGHISHLNAVILGESLASEEDDFVLPSEEFASQANVQSPEQYAKMYKRSIEDPAGFWSDIASQFYWKKRWGDQ VFEENLDVRKGNVKIEWFKGGITNICYNCLDRHIEAGLGDKIAIYWEGNELGVDGSLTYSQLLDQVCQVANYLKDVGVKK GDAVIVYLPMLMELPITMLACARIGAVHSVVFAGFSADSLAQRIIDCKPKVVITCNAVKRGPKAIYLKDIVDAAIHQSAQ SGVSIDVCLTYENPYAMKREDTKWKEGRDIWWQDVIPRYPNTCPVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYT ATTFKYAFDYKPSDIFWCTADCGWITGHSYVTYGPMLNGATNIVFEGAPNYPDAGRSWDIVDKYKVSIFYTAPTLVRSLM REGDGLVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQ PVIVDEKGDEIEGECSGYLCVKGSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLTGRVDDVINVSGH RIGTAEVESALVSHPQCAEAAVVGVEHELSRVSV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24095
14 589 576 0.0 –
PANTHER
PTHR24095:SF217
14 589 576 0.0 –
SUPERFAMILY
SSF56801
35 589 555 5.49E-150 –
TIGRFAM
TIGR02188
44 590 547 4.9E-247
IPR011904
CDD
cd05966
47 589 543 0.0 –
Pfam
PF16177
49 109 61 1.6E-21
IPR032387
Gene3D
G3DSA:3.40.50.12780
81 550 470 2.6E-97
IPR042099
Pfam
PF00501
119 557 439 2.6E-93
IPR000873
ProSitePatterns
PS00455
296 307 12 -
IPR020845
Gene3D
G3DSA:3.30.300.30
555 593 39 4.8E-10 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0003987
Molecular function Acetate-CoA ligase activity Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA.
Subterm of
GO:0016208
Molecular function AMP binding Interacting selectively and non-covalently with AMP, adenosine monophosphate.
Subterm of
GO:0019427
Biological process Acetyl-CoA biosynthetic process from acetate The chemical reactions and pathways resulting in the formation of acetyl-CoA from acetate, either directly or via acetylphosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0637400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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