Description

IPR042099 is a ANL, N-terminal domain.

<p>This superfamily comprises structural domains found at the N terminus of various ligases from the ANL superfamily. The name ANL derives from three of the subfamilies - Acyl-CoA synthetases, the adenylation domains of the modular non-ribosomal peptide synthetases (NRPSs), and the luciferase enzymes. Members of this superfamily include luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases as well as a plant auxin-responsive promoter family. These enzymes are involved in catalysing the initial adenylation of a carboxylate to form an acyl-AMP intermediate, followed by a second partial reaction, most commonly the formation of a thioester. These adenylating enzymes utilise a 140 degrees rotation of the C-terminal domain to adopt two distinct conformations that are used for the adenylation and thiolation reactions. Thus, by using two different conformations of the C-terminal domain, these enzymes perform two distinct steps of catalysis.</p> <p>Luciferases are composed of a large N-terminal domain and a smaller C-terminal domain, which form a cleft. The active site of these enzymes is located at the interface between these two domains, with most active site residues located in the N-terminal domain, and two lysine residues in the C-terminal domain. The N-terminal domain is involved in catalysis, and the C-terminal domain is essential for luciferase activation during the catalytic reaction [[cite:PUB00097395], [cite:PUB00097393]].</p> <p>The overall structure of the N-terminal domain has been characterised in a fatty acyl-CoA ligase in M. tuberculosis, FA and fatty acyl-AMP ligase FAAL28. The N-terminal domain of FA consists of three subdomains: subdomains A and B form α+β topology, which pack together to form a five-layered α-β-α-β-α tertiary structure. The third subdomain C folds into a distorted β-barrel topology. In FAAL28, the C-subdomain presents an insertion between β-strands 1 and 2. A hydrophobic interaction was identified at the interface of insertion and N-terminal domain, and it was suggested to play a fundamental role in anchoring the insertion motif and arresting the acyl-CoA catalysis [[cite:PUB00059029]].</p> <p>The Mycobacterium tuberculosis fatty acyl-CoA synthetase (ACS) FadD13 is a peripheral membrane protein essential for virulence and intracellular growth of the pathogen. FadD13 was identified to play a central role in lipid metabolism, and therefore would be a possible drug target. FadD13 comprises an N- and a C-terminal domain. The N-terminal domain folds into an α+β topology and can be further divided into two subdomains. The CoA binding site in ACS proteins is formed in the junction between the domains upon a 140 degrees rotation of the C-terminal domain after the initial adenylation step [[cite:PUB00097392], [cite:PUB00097394]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 77

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space: