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LotjaGi1g1v0637400.4

Overview

Field Value
Gene ID LotjaGi1g1v0637400
Transcript ID LotjaGi1g1v0637400.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Acetyl-coenzyme A synthetase; TAIR: AT5G36880.1 acetyl-CoA synthetase; Swiss-Prot: sp|B9DGD6|ACS_ARATH Acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal; TrEMBL-Plants: tr|A0A151QY83|A0A151QY83_CAJCA Acetyl-coenzyme A synthetase; Found in the gene: LotjaGi1g1v0637400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:119253672..119261161) extracted from Lotus japonicus Gifu genome v1.2.

GTGATTTGTCAGTATGCGAAGATGTATAAGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGATATTGCATCACAATT CTATTGGAAAAAGAGATGGGGTGATCAAGTTTTTGAGGAAAATTTGGATGTCAGGAAAGGGAATGTTAAGATTGAGGTGA TTTATTTGAATTCAATTTGGATCTTGCTTTCATTTTTTTTTTCTTATGGTAGTGTTTGTTCAAGGGTGAGTGGTGGTTGT AGTTTGTGTGTATGTGTTGATTTGTTGCATTGCATCAGTGGTTCAAGGGTGGGATCACCAACATCTGTTATAATTGCTTG GATAGACATATTGAAGCTGGACTAGGTGACAAAATTGCCATTTATTGGGAAGGCAATGAACTTGGTGTAGATGGTAGTTT AACATACTCTCAGCTTCTAGATCAAGTTTGCCAGGTTTGTTCTGACTTTCTTCTGTGTTTGTCTCTTTCTCATGCAAATA AGATATTCAACCTGAGATTTCGGGTGCTAGACCGTTTTGTTTTTAAAATGGGAAAATACTAATGGAAAATACAATTTTTT TGCCAGGTTGCTAACTACCTGAAAGATGTTGGTGTGAAAAAGGGTGATGCTGTTATTGTTTATTTGCCTATGCTTATGGA GCTTCCAATCACAATGCTTGCATGTGCCCGCATTGGTGCTGTTCATTCGGTATCTCACACAACTTTTTTTTTGTACTTGT CCACTATTTTCTTGCTTAGTCGTGTTCTCAAAATTATCAGATTGCTTAATTTGGTTCACGCTTGCCAGTTCAGTAATGCT GTTAGCTTTTTGATTGTTTAGGTTGTATTTGCCGGTTTTTCTGCAGACTCTCTTGCGCAGAGAATCATTGACTGTAAACC AAAAGTTGTAATCACTTGCAATGCTGTTAAAAGAGGCCCTAAGGCTATCTATCTGAAAGACATAGTGGATGCTGCCATCC ATCAATCTGCCCAAAGTGGGGTCTCTATAGGTGGGGAGATATCATTGATTTGCTTATACTTTATAGTTTCAACGCTATAA TCTCCTCAATTAATATTATGCAGTTTAGTTTTATGTATTAGAATTCAAATGACTAGACAAAAACACACAGAGATCAGTAT AGCTAATATCACATGCATCTTTTCATAGCTGATGATCAGTGACTAAATTTGAGCTTACTAGCATGAAGATAAATCAAACA CTTTGTTCTAGTAAAATTACTTCTGCCTTTTGATTTAATGGTTCGTCAGTGAATTTCATAGCCTCTGCTTTTTCATTCAT GTCTCTTACATTTGCCGTTTATTTAGTGAGATATAAAGTATGTAACTAGGACTGTGAGTCCCATATCAGTTGGGTGTGAG ACAACTATTAAGTTTGTTGATAGTTTGAGAAAGTGTCCTATGACTTTTTAAGTCTTTTTCCTATCATCATTCCATACTGA TTTTTGAAGTTCTTGACCACTAAAGAGTGGGCTGGTATGTTATTAAGTATTAACCTTCTGCATTTGGTGCTTGTGTCCAA CGCATTTAACATGTTTCACTTTCACTATGTAACAGACTTTCCCAACTGAAGTGAGCAATAGAATTATCTCTAATGTGTGT GCACATGTATATGCTATCACCAAATTCATCCATAATATGTCATGTCATCATATCTTCTTGACCTTTTTCTTTGCACTTTT GGGTCTAATCAGATGTATGCCTAACTTATGAAAATCCGTACGCAATGAAGAGGGAAGATACCAAATGGAAGGAAGGGAGG GATATATGGTGGCAGGTTAGTATATGAAAGTTTTTCCCCTTTGCATATATACTCTTACTGTGTCACGTCACATGGTTATC TAACTATACCAGTAGTAACATGAGTTCTGCAAAATGCTTACGTGCCTGCTGAGGATTAGTTATAACATAAGTTTAGTTTG GATTTCTTTAGCCATTTTGAACAGATTGATTTGTTTCTGATTATAAGTTCGCTATGAATCTCCAAATATTTTATATTCAT GGTTATTGCTTCTATAATCATATAGAAGTTCACAGTTCACACCCTTTTTCCTTTTTGGCTACTTTTTTGTTGTTTTGCAG GATGTCATTCCTCGATATCCAAATACTTGTCCAGTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAG TGGGAGTACAGGAAAACCTAAGGTATTTGGGTGCTGTTATTGCTGTAATTGGAGTTATATTTCCTTTTACTTCATCTCTT TACTCAGCGCTGCTGCTTCTAACATATGTTTCTAAAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCA ACAACATTTAAGTATGCATTTGACTACAAGCCGTCCGACATTTTCTGGTATGCTTGAAAGTTTATCTTCTATTTTTTTTG TTCTTTTTATCTTTTAAATGTTCTTGATGAAAACTGGATCAGGATTCTTATTTAACTCCTTTATTCGCTTAATACAGGTG TACAGCTGATTGTGGTTGGATTACTGGGCACAGTTATGTAACTTACGGACCCATGCTCAATGGTGCAACTAATATTGTGT TTGAAGGGGTAATAAATTTCAACTTCAATATAGTGTAATAATTTATATGCGTGATAGAAAAAATGAATCGAAGAGAAATA TTACTAGTGCACCCTTACCAGAAAGAATAATTCGATCATGCATATATATTTGTAGAATTTAACTATCCTATAAATTGGTT GGCCTTATGATAAGACTGATAGAAGCCACAATTCTATCAATTTATGTTGAGGGAGACCATGGAAACTCTTAGTAAAACCA TTTAAAGGTCTTTAATCTAAATGGCCTGTCTGAACTCTTGGTTTTTGATCGACCACTCTGGCACCGTTTCATCCATGTTG GTAACTTCACCTAGTTCGGAAAATGCTTTGATTGTTGCTTCTTGTTGGTTGGGAATTTTAAAAACAAATCTGTTACACCA AATGAAAATGATATTATATAGGTCTTTAAGAAATGATATTAACTGTTTGAGCTCACAGAATTGTTAGTTTGTTACTGAAC AGACAAAACGAAAATGCACTGTCACTAAATATTCACTGACTAGCCACTTGGGCTTACCAGTTACCACAAGTTGTAAGGGT GTCAATAGCGCGCTATGGTGGCGCTATAGCACAGTAGCATCCCTTGGCCACTCCTAGTTGTTGCGTAGCAGTGCAGTTCA GAGTAGCGGCCGTTAAAACGGAAGAAATAGCAGCCACAGCGGCGCTATTTGGCTGCTATTTGGTGGAATGGATAAAAACT AAAAAACAACCCACAAAAAGTTCAAGTTAGGGCATTTTGGGGAGGTGTTTCAGGGTTTTTTCTTCGGAAACATACTGAGA ACGGTCTAGTTTGAGGAGGATGAGGACGAAGTGAAATAGAGCTTTCATGTTTTTAGGCAGTTTAGTTTATTGAATAGAGA CTTAAACCTCTTGGTTACCTTGACTTTTGTTGGTACTAGTATGTTTTGTTTGAGACCTATTTTTTTGAGCATTTTTAACT ATACAAAAAATTCAGCATAGCGGCCATCCTGCTTATGCGCTATGCCTCAATAGCATTTTTGTGGTCAGTCGCAACGCGCC GCTATCCGTGATTGACTACACTCTAGTGGTGAAACTCTTTTTCCTGTGAAATTGAACTTGTAATGTTTCCTTAAAAGATA TTTACTTTTTATATGAAAGGACTGTTGTTTAGGTGATATAAAGAATTTCAGGGGCCTCATTCAAAAGAGGTCAACAATTT ATGCCCGATCTGTTGGTTGACTACGCTAAAGCTGAGTATTGGAGATACACAAAAATTGAATTGGCAACATATTTGCAGGA TTTATGAATATATTTATTTCCACCATCATCATTTTATTAATTTGGTGTTTTTGAGTTAATAGATAGAAAATTATGGGTGT CAAGGAATTGCAAAGAAATACTTTGCTTTAAATGTGATAAAATGAGTGCAGGCACCCAATTATCCGGATGCTGGTCGTTC TTGGGACATTGTTGACAAATATAAAGTTTCAATATTTTACACTGCCCCCACATTGGTCCGGTCCCTCATGCGCGAAGGTG ATGGGGTAAGATACCACTATGCTTATAAGTTTACTGTAACACTGTTTTAAAAAGTTATTTGTGATTGTGAAAAAAAATGC TTCTTCACGCACTATTGCTAACAGACGCCCCTGCACATCTTGTCTCTTTTGGCCTTCTACTTTCCATTTTACAAATTAGT ATCAAATTGAAGATCAGAGACTCTTAATATTGTTGCAATTTCAATTTTCAAAGAAGTAACCTGTTAATTGTACTTTATCA GTTATAGTATCAGGCATTAGGTTGATGCTTTTGTTTTTATTGAAATAAGATACATTATATGATACAGGAGTTGGGCAAGG TTTTTTTTCGAGTTCTTAACTTCATTGTGTATGATGTCAAAACAGGACTGAGAGAGTATTAGGTTGATTTGCTGTCCATA TAGTCCCCCCCCCCCCCAACAAAATAAAAATCCATCCTGCATTTATGATGCAGGCATAACAAACTTTGGTGTCAAATGAT AGAAAAAGGGAATTCTGTTGGATGCATAAGTTTAGAGTTCCATATGTTGTTGTTTTCATTATTGTTCATTAAAGAATTGA AATTTTTGCAGCTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTTGGAAGTGTTGGTGAGCCCATAAATCCAAGT GCATGGAGGTAAGGAGGTTATTTATTTCTTTATCTATGCTTGGTGATTACAGCTTAATTTCCTATATCAAGGAACATTCT GATGCATTCTTTGATCTTTCTCTTTCAGGTGGTTTTACAACGTAGTAGGAGATTCAAGGTGCCCTATCTCTGACACTTGG TGGCAAACAGAAACCGGTGGTTTCATGGTAATTTAATATCCAATAGTTTTCTGGGTCAAATATTGATTCTAATAGCAGGC ACTGAACAAGTAATGTAGGTGTTTTCATTAGAGACATACGACAATTAATCTGCTATGAGCCATTATGCACAGCTGAAGTG GTAATAGAGAGTTAGGACTGTAGGGTTTTATATGGAAGTCTTAGGTGTGTTTGTGTGTGTGTGTGTGTGCGTGTTCGAGA GAGAGAGAGAGAGAGATCATATATGTGCGTCTATGTCTTTGGAACTTAAATTCTTCATTGTTGCTTGTAGATAACTCCAC TACCAGGTGCTTGGCCCCAGAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGGTCTTTATATGTTCATTTTAT AATTTAGTGAACTTGTTGATCTCTTTGCTATTATTTCACTATGCCTTTATCACTTACAAATTTTGTTGTTACTGTAGCCT GTCATAGTGGATGAGAAAGGTGATGAAATAGAAGGCGAGTGCAGTGGTTATTTGTGTGTTAAAGGATCATGGCCCGGGGC TTTCAGAACTCTCTATGGTGATCATGAAAGATACGAAACAACATATTTCAAGCCATTTGCTGGCTACTATTTCAGTGGTG ATGGCTGCAGCAGGTTAGTGATTTACTAAAATTAGATTTTCATAATTTGCCAATTTCCAGGATTCATGTACAATATCTCT GAATTTTAGTCTGTGTAATTTATATTTCGGCACTCTAATTCATAAACAGGAAATACCATTAAACGCAAAAATGTGTGGGA TAATTATGTTCTACGGGTTTAACTATATTTCAGGGATAAAGACGGATACCATTGGCTCACTGGAAGAGTTGACGATGTCA TCAATGTCAGGTATTCTTGGAATTTTAAAAGCTCTTTCTGATGATTCGTGTCCTACAATTTCTTTCTTTATAGGTACAAG CATGTAAACATGAACACAGACTGGTTGTACCATTCATAAAGTTCTAGTTCTAGTTGATGTTGAAAACTAATATATAGTCT TGTTACATGCAGTGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTTTAGTCTCACATCCTCAATGCGCAGAGGCCG CTGTGGTTGGTGTGGAGCATGAGGTATAGCTATATAATGTTCTCTCCTCGTGGGAGTCAACATCGACTGTGATTTTGTGT TATGTGAAAGAAACTAAGTAGAGTTTCTGTATAGCATAATCATGTGATTGCTGTTCTGTATTTGAGTCAATTACCATTAC TACTGTAGGTCAAAGGACAGGGTATCTATGCATTTGTTACTCTTGTGGAGGGTGTTCCTTACAGTGAGGAACTGCGGAAG AACCTCATACTCACAGTTCGAAAGCAGGTATGTTCTTTATGTTCTTTATGTTCAGATAAAACACATTTTCTAAAAGTATA TACAATGTTCAAAACTAAATGGTATTGTTAACACCATGGTCAGTCAATAGTAGCCTGGAAATTACCTTAATGTTTGTATT ATTACACATTGACTGGAATTACAGAAGATAGAAGGGAATAAGAAATAATTTTCTGAGGAATTTTCCTGGCAAATGGCAAT GGTACTTCAAAGCAGGGAACATGGCACTACGGTGCCTTGATAAACACTCAAGATAAATACTTAGTTTAGCTGCTATTCTT TGTTTCCTTTACACTAAACATGATCACAATTGTCTGCATCATTACCAGAATAATGGCTTGGGTAGTGGTTGCATCCTAGA CTGACCAGGTTTTGGCCCCATTGAACTTCTAGTGTCATTGGTTGTTGGTCCCCCCATTGAACTTCTAGACATTTGTGAAT TTGATCATTTTATTGACACTAACCAATAACATGTCCTGAAATATAAATTTCTGTTGTTGGTTCCCTTAGTAAGAATTATG TGGATGGTTTTAAGTTGGTGCTTGAGCTAACAGGTTCTGCATTACAGTTTGTTACCACCAATTATCATCATCATGTAGGG ATAATATTTTTCAGTACAAACATTGATGCTTTATTAAAAAAGATCTTTGACCTCTTCGTACAAAGCCAAGTGAACATAGA TATTTGATATTTACAGCATGTTTGCATTTACCGTTAAACCTTCTAGAATCACTTTTTGCCCCACAAAAGCTATTCTTATA GTGTTTGGATTGATAGTAGCACACAATTCAAAGCAAGGTAACTTCAAAATGTAGCTTCTCTCCAGAGGTGAATATGGGGC TTCCCACATGCTATTAGTAGCTTTTTCCAAATCACTCCTTCCTCCAACGTGGAAATCTATCGAATTCCAAACACAAACTT AATCAGGCTGACTCTTGGGATGACCAGATTGATCATGTATTTCAGATCAGTTTGTATGACTTCATTTATCACTTATTTTT CACCCTCTTTTATGAACATTTCAGATAGGAGCATTTGCAGCACCAGACAAAATCCACTGGGCACCTGCACTCCCGAAAAC AAGGAGCGGAAAGATAATGAGAAGAATTCTGAGAAAAATTGCTTCTAGGCAGCTTGATGAACTTGGAGATACAAGTACCC TTGCAGATCCAAACGTGGTCAATCAACTTATAGAGCTTTCTGATGCATGA 

CDS sequence (LotjaGi1g1v0637400.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTATAAGAGATCGATTGAGGACCCTGCTGGATTCTGGTCTGATATTGCATCACAATTCTATTGGAAAAAGAGATGGGG TGATCAAGTTTTTGAGGAAAATTTGGATGTCAGGAAAGGGAATGTTAAGATTGAGTGGTTCAAGGGTGGGATCACCAACA TCTGTTATAATTGCTTGGATAGACATATTGAAGCTGGACTAGGTGACAAAATTGCCATTTATTGGGAAGGCAATGAACTT GGTGTAGATGGTAGTTTAACATACTCTCAGCTTCTAGATCAAGTTTGCCAGGTTGCTAACTACCTGAAAGATGTTGGTGT GAAAAAGGGTGATGCTGTTATTGTTTATTTGCCTATGCTTATGGAGCTTCCAATCACAATGCTTGCATGTGCCCGCATTG GTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTGCAGACTCTCTTGCGCAGAGAATCATTGACTGTAAACCAAAAGTT GTAATCACTTGCAATGCTGTTAAAAGAGGCCCTAAGGCTATCTATCTGAAAGACATAGTGGATGCTGCCATCCATCAATC TGCCCAAAGTGGGGTCTCTATAGATGTATGCCTAACTTATGAAAATCCGTACGCAATGAAGAGGGAAGATACCAAATGGA AGGAAGGGAGGGATATATGGTGGCAGGATGTCATTCCTCGATATCCAAATACTTGTCCAGTGGAGTGGGTTGATGCAGAG GATCCACTTTTTCTACTCTATACAAGTGGGAGTACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGT GTACACTGCAACAACATTTAAGTATGCATTTGACTACAAGCCGTCCGACATTTTCTGGTGTACAGCTGATTGTGGTTGGA TTACTGGGCACAGTTATGTAACTTACGGACCCATGCTCAATGGTGCAACTAATATTGTGTTTGAAGGGGCACCCAATTAT CCGGATGCTGGTCGTTCTTGGGACATTGTTGACAAATATAAAGTTTCAATATTTTACACTGCCCCCACATTGGTCCGGTC CCTCATGCGCGAAGGTGATGGGCTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTTGGAAGTGTTGGTGAGCCCA TAAATCCAAGTGCATGGAGGTGGTTTTACAACGTAGTAGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACA GAAACCGGTGGTTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAGCCTGGTTCTGCAACTTTCCCTTTCTTTGG AGTTCAGCCTGTCATAGTGGATGAGAAAGGTGATGAAATAGAAGGCGAGTGCAGTGGTTATTTGTGTGTTAAAGGATCAT GGCCCGGGGCTTTCAGAACTCTCTATGGTGATCATGAAAGATACGAAACAACATATTTCAAGCCATTTGCTGGCTACTAT TTCAGTGGTGATGGCTGCAGCAGGGATAAAGACGGATACCATTGGCTCACTGGAAGAGTTGACGATGTCATCAATGTCAG TGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTTTAGTCTCACATCCTCAATGCGCAGAGGCCGCTGTGGTTGGTG TGGAGCATGAGGTCAAAGGACAGGGTATCTATGCATTTGTTACTCTTGTGGAGGGTGTTCCTTACAGTGAGGAACTGCGG AAGAACCTCATACTCACAGTTCGAAAGCAGATAGGAGCATTTGCAGCACCAGACAAAATCCACTGGGCACCTGCACTCCC GAAAACAAGGAGCGGAAAGATAATGAGAAGAATTCTGAGAAAAATTGCTTCTAGGCAGCTTGATGAACTTGGAGATACAA GTACCCTTGCAGATCCAAACGTGGTCAATCAACTTATAGAGCTTTCTGATGCATGA 

Protein sequence (LotjaGi1g1v0637400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MYKRSIEDPAGFWSDIASQFYWKKRWGDQVFEENLDVRKGNVKIEWFKGGITNICYNCLDRHIEAGLGDKIAIYWEGNEL GVDGSLTYSQLLDQVCQVANYLKDVGVKKGDAVIVYLPMLMELPITMLACARIGAVHSVVFAGFSADSLAQRIIDCKPKV VITCNAVKRGPKAIYLKDIVDAAIHQSAQSGVSIDVCLTYENPYAMKREDTKWKEGRDIWWQDVIPRYPNTCPVEWVDAE DPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIFWCTADCGWITGHSYVTYGPMLNGATNIVFEGAPNY PDAGRSWDIVDKYKVSIFYTAPTLVRSLMREGDGLVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQT ETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGDEIEGECSGYLCVKGSWPGAFRTLYGDHERYETTYFKPFAGYY FSGDGCSRDKDGYHWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTLVEGVPYSEELR KNLILTVRKQIGAFAAPDKIHWAPALPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELSDA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD 1 618 618 0.0
PANTHER 1 631 631 0.0
PANTHER 1 631 631 0.0
Pfam 1 58 58 4.9E-20
TIGRFAM 1 627 627 1.1E-282
SUPERFAMILY 2 626 625 2.35E-172
Gene3D 30 499 470 3.1E-97
Pfam 68 506 439 3.1E-93
ProSitePatterns 245 256 12 -
Gene3D 502 631 130 2.5E-29
Pfam 515 593 79 2.9E-24

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Molecular function Acetate-CoA ligase activity Catalysis of the reaction: ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA.
Molecular function AMP binding Interacting selectively and non-covalently with AMP, adenosine monophosphate.
Biological process Acetyl-CoA biosynthetic process from acetate The chemical reactions and pathways resulting in the formation of acetyl-CoA from acetate, either directly or via acetylphosphate.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0637400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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