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LotjaGi1g1v0644500.1

Overview

Field Value
Gene ID LotjaGi1g1v0644500
Transcript ID LotjaGi1g1v0644500.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Beta-glucosidase; TAIR: AT5G20950.3 Glycosyl hydrolase family protein; Swiss-Prot: sp|A7LXU3|BGH3B_BACO1 Beta-glucosidase BoGH3B; TrEMBL-Plants: tr|V7CXE8|V7CXE8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0644500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:120173322..120179235) extracted from Lotus japonicus Gifu genome v1.2.

ATGAACATTACTTCCATCAGTATGAAAAATGCACCAATTTTTTTTTATACATGTCCATTTCTCTTTGTCATCAGTAAAAT TAAAGCTTCCCTTGTTTCCGTGTGATCCAAAACCAAAGTATTGCAAACCAAACCAAACAATTAAAGGATGTCAACACCAA CACTTACCCATGCACTGAATCGAAACCAGTCCCAAATCAAACACTGTTGCAGAGAGATTGAGATTGACCAAATCTATTAA TGTTGCCAGGCCCAGAAGTTTCACTTACCTTATTTTATTATTAATCATGTTGCTTGCAGTCACACTGTCACAGCTTTGCA AATTAATGCAGTGTCACTATCCTTCTAGTTTTTCCTATGTTCCCTCGTGACACGCATTTGTTCAAAAATGCATTCATTTA CACACAAATGTGCCATTGACTTCTATATCATATTATATCTCCTACCCATTTCTCAAATCTCAATGCTTACACTAAAAATG TCATCTTTTTCAGCATTTGGTGATGAGTGATGCTTCATTTCATTCAAAGTCGCATTTGAGGCCAGCTTTGCTCTCCCCAT AAGCTAAAGGTAAAATCTTTTGAAGCTTTCTTGAATGGTGAATGCTTGTTTTGTTTGCTTGTGAATCTGACAGTGAGTTA ATTGCTTGAATTCAACATATGCTGTTAGTGTTAACCTAGCTAAATAGTCAATAGTGTATGTCATTGTAGTTTTGTGTAAG GGATTTTATGTTCTTTCATATTGTTTCTTCATTATTGGAGGGTCCATGTGATGCATCTGAGATTCTGAGTTCTATGCATG ATGAGGGTGGACTATGTTTGCATTGTATAGACAGAGTTTTACTAGTCAATAGTGTATTGTAGTTTGTGTAGGAATTTTGT GTTCTTTCAAATGGCTTCTTCAATATTGGAGGGTTCATGTGGAGCATATGAATTGTATGCATGATGAGAGTTTTACAAAT CCTCTTGATTTTTTTTACATTGCCAGGTTAGAGTTCAAGTATAATGGCTAAAATCCCCTTCTTATTGGTGGGGCTTTGGC TGCTAGGTAGCTGGACAAGTTTGTTGGAGGCAGAATACATGAAGTACAAGGACCCTAAACAATCAATTGATACTCGAGTT CAGGATCTTATTACCAGAATGACTCTTGAGGAGAAAATTGGTCAAATGTTGCAGATTGAGCGCAAGTATGCATCTGTTGA TGTCCTCAAGAACTATTTTATTGGTGATGATCTGTTTTTCCCTTCCTAATCAGTGGTGTGATTATTTAATTAGGCAATAA TGAAAATTTATCTTCTTTTGAGTAGGGAGTGTAATGAGTGAGGGAGGAAGTATGCCAGCTCCAAAGGCTTCTGCTGAAAA CTGGATTGATATGGTTAATGAATTTCAGAAGGGTGCTTTATCATCCCGGCTTGGAATTCCAATGTTTTATGGGATTGATG CCGTTCATGGCCACGGTACTGTTTATAAAGCAACTATTTTCCCCCACAATATTGGGCTAGGAGCTACCAGGTAAATTGAT CTTAGTAGCACTTCTTGTAAAATTTATATTCTTAGTCCTATCCCCAGTTATATTATTTGAAACATGATGATGAAACAGTT AGGCACAAGTAGTGATGGGATTAGTTACCAAAATTTGTAAAGCTGCTAAGGCATACATAGGTTTTACATGCAAAGCCGGA TCTAGAAACTAAATAGAATTATTTTCTCTGCTTTGTACAAGATTAAAAGTATGATACAAGGTTTTATGTTTAATGGACGG ATAGAGCTAGCAGGGTCATACCCAGAAAAGATTGATAAAGAGGGTGAAAATTGAACAAATTAAGCAAAATAAAAAAATGA CTAATTGGAAGAAACAAATTAAAACTTTTTAGGGAGGTGGATATAACACATGAATACTATTATATTATAAAGAAATTTTT TCTTGCGACCGCCCCATTTGCCATGAACCTAGGTCCGTCCTTGAGTGCAAGTGTGCACATCTGATAGTTTAGTTAGCACA GATTATTGTCTTACTCATTCTAGTCACAATTCCGTCATGTTATAATGGAGAATAATGGGTATTTTAATTTTGCTGATTAG GGACCCTGAACTAGTTAAGAGAATTGGAGCTGTAACTGCTCTTGAAGTTAGAGCAACAGGAATTCAATATGTTTATTCAC CTTGTGTAGCAGTAAGTAACTACAACCAACTTCTGCTTCTCCCAACTTATACTGATTTTCTTGCATTAGCTTATTCTCTT TATAGGTCTGTAGAGATCCAAGATGGGGTCGGTGTTATGAAAGCTACAGCGAAGATCCTAAAGTAGTTCAAGATATGACT GAAATCATATCAGGATTGCAAAGGGACGTCCCTGATAATCTTCCAAAGGGTGTCCCTTATATTGCTGGAAAGTAAGAATT AAAAAAACAACAAAATAATTTAATTTTAAGATGATAATTCACATGTCAATTAGTTGAGTCTTGGAGTTGATATTATTGCT CTTGATTCAGTTGAATGCTTTTTGTGTTGTACAATCCCAAGAAAAAGAATTCATTCGTTTGTTTGAACTTTGTTGAAGTT TTTTTTTGGTACATCGGAAAGATTGACTTGTTGAAGTTGAAGCTTTAGAAACAATGCTGATACGTTTTGAACAGGAAAAT GTACAATTAGTTGTCTTCTTTTGTCCTTAACCCCACCCACTTCTATTCTTCATTTCTGTTTCATTCTTTATATTTATATG CATGTTTGGATACACGGCGGAAAACTACGGTAAGACCAACATCATGGTGGGCAGTCACAAAAGCCAAGGGAAGTTGCTTC TGTCTACCTTGATTTTGGCTTTACCGTGGTTTTCCACCATGTAGCCAAACATACACTACATCAGCTACTAGGATAAAGTA GGCCAAATCATTGAAAAGGATTATCAAATAAAAACCTGAAAGCAAGAGATGAAGGACTTTGTTCCCTAAATTAATATGCT GTTCATGTTAGGTTGCACCATACCACAAAATACTGCGTTAAACTTATTGATTTTGGTTTAGTTAGTATTATGTTTCTGAA CTACTCATGTATTGCTGAACAGAGAAAAGGTTATAGCTTGTGCTAAGCACTATGTGGGTGATGGTGGAACAATCAATGGG ATTGATGGGAACAACACTGTTATAGATAGAGATGGATTAATGAGAGTTCACATGCCCGGCTACTTTAGCTCAATTAGCAA AGGTGTGGCAACCATAATGGTCTCTTACTCCAGTTGGAATGGAATAAAAATGCATACTAACCATGACATGATCACTGGCT TTCTCAAGAACACTCTGCATTTTAAGGTAAAGTAATTTGTTCATCAAATATAGCATTGGAACCCTGATATCATTGTATAT TTGCAATTTTAGATAACACCTCGCCTTTTCTTGGATTACGCCAGGGCTTTGTTATTTCAGATTTTGAGGGTATTGATAGA ATAACCTCTCCACCTCATGCAAACTTCACTTATTCGGTTGAAGCAGGAGTTTCTGCTGGCATTGACATGGTAGTTTAGGC CAAAAGTATATGATATTATTAAGCGAGAATTGATGTTCATCCATTGAGGACATATCTAATAGTGTTACACTTTGTTTGGA TTTGCAGTTCATGATTCCAAAGTTCTTCACAGAATTCATCAATGATCTAACCATATTGGTGAAAAATAAGCTCATTCCGA TGAGTAGAATTGATGATGCAGTGAAAAGAATTTTGTGGGTTAAGTTCATGATGGGTATTTTTGAGAACCCATTCGCTGAT TACAGCTTGGTCGGATATTTGGGGATTCAGGTTAGCTATTTTGTTTTCCTTGAGTATTTCCATTTAAGTCCGCATATGTT GTGTCATAGCCGGTCCTAAGCCCGGGTAAAGGAGGAAGTTGTGTTATGCCTGTGGCGTGGGATAAGGCTTTTGTTGTTGA TTTTCTCCATTAACTTCTCTAATTTCACAATTAGATATAAGGATAACCCTTATCTCTTCTATATTTACCAAAATTCTGAG CAGAAGCACAGAAAATTGGCTAGGGAAGCAGTAAGGAAATCACTGGTCCTTCTAAAAAATGGTATATCTGCTGAGAAGCC AATATTGCCTCTTACTAAAAAGGTACCAAAAATACTTGTAGCTGGAACCCATGCTGATAATCTAGGATATCAATGTGGTG GTTGGACCATTGAATGGCAAGGAGTCAGCGGCAACAATCATCTTGAAGGTGAGTTAACTTTAATTGTATTTCCATCATTA TAAAGAGACTAATGCAGCTCTTCTTATCTTGTGCACTTTTATATGATCAGGGACTACAATTCTCACAGCTATAAAAAACA CTGTTGATCCAGAGACCACTGTGATCTACAAGGAGAACCCTGATACTGAATTTGTCGAGTCCAATGGATTTTCTTACGCC ATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGGAAGGTGACAGCATGAACTTGACAATCCCCAGCCCTGGTCCTGA GACAATAACAAATGTTTGTGAAGCCATAACATGTGTGGTTATTATTATTTCCGGGCGCCCTCTAGTTATTGAACCGTATC TTGCTTTAATAGATGCACTTGTTGCTGGTTGGCTTCCTGGTAGTGAAGGGCAGGGTGTGGCTGATGTTCTATATGGTGAC TATGGTTTCACTGGAAAGCTTCCAAGGACATGGTTCAAAAGTGTTGATCAGCTACCAATGAATGTTGGAGATCCTCACTA TGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTACCCAACCTACTAAGGCCATTTACTCCGAGTAGATATCATCTTGAT CTGCATATTCGTTAAAAAATAAGAGTATGAAAGGTTGATTTTCAACATTTGGCAGGCATGCTTATTTTGGCAAGTTTTTT CTAGTGTATTTTTTTTTTCTGAAGTTTTGCTTCTTCATTTTACATTAGGATCCACATTGAAAGCTCAATTTTATTAATTC ATTAAAGACGTAAAAATTGGGTTAAACCACCCAAGCTTAGGTGTTTCAATAGTTTTATTACATGTCTTTAAAAAATTCCA AGTCAGATATTACATGTGTCATCATAAAATTCAACTCATTTTATTATTCATTATTTTTATATTTTTATCAAATTCATACT TTGAACCCATCAATTAGGATAAATTACACCATGAACATTTTTCTTAAAAGAAAAACCAAGAACCCTAATCCCCAATTTTG AATGTTACTTTCAATTTAGGATAAAAAGTCCCACCATTAATAATCACCGAAAATATCACATAAGAAATTATTCATGTTTA AAATAAATTCACTCTTAATTATTCATTTCCTGTAAAATTTCCATTGAAACTCACCGGAAATTCAAATTTCGGCCGCCGCC GCCACCTGCGTTTCTGGGCTGAATGCACAGAACTTTTTTTTTCTTTTTCCTTTTCAATTTTTAACACTCGCGTGTCTCAT CCATCATTTTGAATCTTTATATATACACCAATAGAAAATTTTAGCTGTCTTAGAATTTTGTTGTTGTGTTTGTGTTATCA AAGGTGGCTGTCTGGTTGAGGTAGAAGAAGATAGTAATTGGTTATGGCGTGAAGGACACGTTCTATATAGCCCATGGATC ACTCATGAAACAGGACATTCCTCCAATCGTGGAAGAAGGAGGTGCTTCCGCCCATACCCAATTTCATGAAACAGGACATT CAAAATTTCTCAATGATTATCAATGATTGGACTTCTGGTTCTAAATCAGAACTTTCAAAATTGGGGATTAGGGATTCTTG GTTTTTTTTAGAAAATACTTTCGATGTGTAATTTATCCTAATTGATAGGTTCAAAGTATAAATAAATTATTTAATAAAAT GAATTTGACAAAAATATAAAAAAAATGAATAATGAAATGAGTTGGATTTTATGTGACACATATAACATCAGTTG
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0644500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGACTGAAATCATATCAGGATTGCAAAGGGACGTCCCTGATAATCTTCCAAAGGGTGTCCCTTATATTGCTGGAAAAGA AAAGGTTATAGCTTGTGCTAAGCACTATGTGGGTGATGGTGGAACAATCAATGGGATTGATGGGAACAACACTGTTATAG ATAGAGATGGATTAATGAGAGTTCACATGCCCGGCTACTTTAGCTCAATTAGCAAAGGTGTGGCAACCATAATGGTCTCT TACTCCAGTTGGAATGGAATAAAAATGCATACTAACCATGACATGATCACTGGCTTTCTCAAGAACACTCTGCATTTTAA GGGCTTTGTTATTTCAGATTTTGAGGGTATTGATAGAATAACCTCTCCACCTCATGCAAACTTCACTTATTCGGTTGAAG CAGGAGTTTCTGCTGGCATTGACATGTTCATGATTCCAAAGTTCTTCACAGAATTCATCAATGATCTAACCATATTGGTG AAAAATAAGCTCATTCCGATGAGTAGAATTGATGATGCAGTGAAAAGAATTTTGTGGGTTAAGTTCATGATGGGTATTTT TGAGAACCCATTCGCTGATTACAGCTTGGTCGGATATTTGGGGATTCAGAAGCACAGAAAATTGGCTAGGGAAGCAGTAA GGAAATCACTGGTCCTTCTAAAAAATGGTATATCTGCTGAGAAGCCAATATTGCCTCTTACTAAAAAGGTACCAAAAATA CTTGTAGCTGGAACCCATGCTGATAATCTAGGATATCAATGTGGTGGTTGGACCATTGAATGGCAAGGAGTCAGCGGCAA CAATCATCTTGAAGGGACTACAATTCTCACAGCTATAAAAAACACTGTTGATCCAGAGACCACTGTGATCTACAAGGAGA ACCCTGATACTGAATTTGTCGAGTCCAATGGATTTTCTTACGCCATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATG GAAGGTGACAGCATGAACTTGACAATCCCCAGCCCTGGTCCTGAGACAATAACAAATGTTTGTGAAGCCATAACATGTGT GGTTATTATTATTTCCGGGCGCCCTCTAGTTATTGAACCGTATCTTGCTTTAATAGATGCACTTGTTGCTGGTTGGCTTC CTGGTAGTGAAGGGCAGGGTGTGGCTGATGTTCTATATGGTGACTATGGTTTCACTGGAAAGCTTCCAAGGACATGGTTC AAAAGTGTTGATCAGCTACCAATGAATGTTGGAGATCCTCACTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTAC CCAACCTACTAAGGCCATTTACTCCGAGTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0644500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MTEIISGLQRDVPDNLPKGVPYIAGKEKVIACAKHYVGDGGTINGIDGNNTVIDRDGLMRVHMPGYFSSISKGVATIMVS YSSWNGIKMHTNHDMITGFLKNTLHFKGFVISDFEGIDRITSPPHANFTYSVEAGVSAGIDMFMIPKFFTEFINDLTILV KNKLIPMSRIDDAVKRILWVKFMMGIFENPFADYSLVGYLGIQKHRKLAREAVRKSLVLLKNGISAEKPILPLTKKVPKI LVAGTHADNLGYQCGGWTIEWQGVSGNNHLEGTTILTAIKNTVDPETTVIYKENPDTEFVESNGFSYAIVVVGEHPYAEM EGDSMNLTIPSPGPETITNVCEAITCVVIIISGRPLVIEPYLALIDALVAGWLPGSEGQGVADVLYGDYGFTGKLPRTWF KSVDQLPMNVGDPHYDPLFPFGFGLSTQPTKAIYSE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR30620
1 436 436 1.8E-278 –
PANTHER
PTHR30620:SF80
1 436 436 1.8E-278 –
Gene3D
G3DSA:3.20.20.300
1 200 200 8.4E-68
IPR036962
SUPERFAMILY
SSF51445
3 216 214 7.37E-58
IPR017853
Pfam
PF00933
4 178 175 4.1E-28
IPR001764
Gene3D
G3DSA:3.40.50.1700
202 430 229 1.6E-89
IPR036881
Pfam
PF01915
217 426 210 1.6E-34
IPR002772
SUPERFAMILY
SSF52279
217 426 210 3.14E-58
IPR036881

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004553
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Subterm of
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0644500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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